| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,972,741 | 0 | G | A | 21.6% | 112.7 / 11.5 | 51 | intergenic (‑50/+95) | tar/cheW | methyl‑accepting chemotaxis protein II/purine‑binding chemotaxis protein |
| Reads supporting (aligned to +/- strand): ref base G (32/8); new base A (1/10); total (33/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.10e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGCAGCATTAAATCCCAGGTTGACGTCAGCTCGCCCTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTT‑CTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTGCGCCCAGTCCAGTGAGATATTCTGTTGAAA > NC_000913/1972507‑1972963 | tGCAGCATTAAATCCCAGGTTGACGTCAGCTCGCCCTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTT‑CTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGa < 1:153623/236‑1 (MQ=255) cagcaTTAAATCCCAGGTTGACGTCAGCTCGCCCTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTT‑CTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGaaa < 1:662104/236‑1 (MQ=255) ttctggtcccagTAATTGATT‑GAAACCACAAACCCCTTGCGGGCTTGGGAAAAGGAAAAAAAAAAACGACCGGCCGAAAATAAGTTGTAACAGTCCGAAACCCCCCAGCACCATT‑ACCAACAGGGGGCCTCCGCGGATACGGTTAATCATAAGCCCCCTTCCTGAAAACAAT‑TTGATCTCGTTATCGGCAAGGAGGGGGAAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGa < 2:267181/225‑1 (MQ=255) cccGTAATTGATTGGAAACCACAAAGCTCTT‑CTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATaaaa > 1:382170/1‑235 (MQ=255) ccAAAAAGCTGTT‑AGGGTAATGGTGAAGGGAAGAAAAAACCAGACTGCCGAAAATAGGGTGTAACGTTGAAAATCCCCCCAGCCCCTTT‑CCCAACAGCGGACCTCCGCGGATAGGGTTAATCAAAAGGCCCCTTCCTAAAAACAAG‑TTGATCTCTTTAGCGGAAAGGAGGGGGAAACCTTTATGGCTGATCCCCCCCGCCGCGAAATTGAAATAAAAAACCCGATgatctgcgcat < 2:506677/236‑11 (MQ=255) tt‑ctGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATCCGCAGATAATCGCGGTCAttt > 2:516285/1‑236 (MQ=255) ggTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGa > 1:64628/1‑236 (MQ=255) ccGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTg > 1:51567/1‑235 (MQ=255) gTAACAGGCCAAATCCCCCAAGC‑CCATTAACCAACAGCGTGACTACGCGGATACGGTAAATAAAAAGGCCCCTTCCTAAAAACAAG‑TTGTTCTCGTTATCGGAAAGGAGGGGGAAAACTTTATTGCTGAGCCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGaa < 2:93242/198‑1 (MQ=255) tAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCcgcg > 1:274321/1‑229 (MQ=255) tAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGAAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCACATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGGCACTTCTGACGCCGCGCTATCTa > 2:466215/1‑236 (MQ=255) tGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGa > 2:99279/1‑108 (MQ=255) tGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGa < 1:99279/108‑1 (MQ=255) tGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAACTAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAgcg > 1:255673/1‑236 (MQ=255) tGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGga > 1:93242/1‑198 (MQ=255) aaTACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAgcg > 1:119031/1‑232 (MQ=255) cAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGAcgccg > 2:376656/1‑209 (MQ=255) cAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGAcgccg < 1:376656/209‑1 (MQ=255) aTT‑ACCAACAGCGTGCCTGCGCGAATACGTTTAATCATAGGGCACCTTCCTAAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAATTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGtt < 1:391873/233‑1 (MQ=255) aTT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCAGCGCTATCTAACAGCGCCATCTCTTCGCTGt > 1:430617/1‑232 (MQ=255) tt‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGGGCTATCTAATAGCGCCATCCTTTCAGTGTTcagc > 2:521806/1‑236 (MQ=255) ccacaaGCGTGACTACGGGGATCGGGTAAATCAAAAGGCCCTTTCCAAAAAACAAT‑TTGATCTCGTTAGCGGCAAGGAGGGGGAAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAAc < 2:213957/204‑1 (MQ=255) cGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCa > 1:213957/1‑209 (MQ=255) cGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGa > 1:478961/1‑236 (MQ=255) cGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAACGCCATCCCTTCGCTGTTCAGCAGCTTTTCGa > 2:119949/1‑236 (MQ=255) gTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAg < 1:478030/133‑1 (MQ=255) gTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAg > 2:478030/1‑133 (MQ=255) tACGCGGATACGGTTAATCATAGGGCACCTCCCGAAAAAAAAT‑TTGATCTCGTTATCGGAAAGGAGGGGGAAAATTTTATTGCTGATCCCCCCCGCCGCGAAATTGAGATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGcc < 2:211135/172‑1 (MQ=255) cgcgGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGCTCAGCAGTTTTTCGATGTTCAcc > 1:656238/1‑236 (MQ=255) aTACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAGATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTg > 1:211135/1‑172 (MQ=255) ttgttatAATCATAAGCCACTTGCCATAAAACGTG‑TTGATCTCGTTCGCGGAAGGGAGGGGGAAATCTTTATTGCTAATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAAt < 2:119031/229‑1 (MQ=255) tACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATc > 1:61413/1‑236 (MQ=255) taaaaaTAAGGCACCTTCCTGAAACCAGG‑TGGATCTCGTTAGCGGCAAGGGGGGGGGAACTTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTACAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAgc < 2:709920/180‑1 (MQ=255) aaGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCAtct > 1:709920/1‑185 (MQ=255) aaGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGGTTTTCCATTGTCACCAGACTCAACATCCGGTCgg > 2:36977/1‑235 (MQ=255) aaGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTAAGCAGTGTTTCGAGGTTTACCAGAATCAACATCCGGTCGc > 2:121389/1‑236 (MQ=255) aaGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATACCTTCGCTGTTCAGCAGTTTTTCGATGTTAACCAGAATCAACATCCGGTCGc > 1:136/1‑236 (MQ=255) gggCCCCTTCATAAAACAAAG‑TTCACCTCTTTACCGGAAAGGAGGGGGAAACTTTTATTGCTGATCCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTaa < 2:380627/172‑1 (MQ=255) aGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGt > 1:559943/1‑232 (MQ=255) ggCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCGCTTCGCTGTTCAGCAGTTTTTCGCAGTTCACCCGAATCAACATCCTGtgcgc > 2:608644/1‑231 (MQ=255) ccTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGt > 1:27279/1‑235 (MQ=255) cTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAGACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTg > 1:537042/1‑235 (MQ=255) cTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTg > 1:492627/1‑235 (MQ=255) cTTCCAGAAAACAAT‑TTGATCTCGTTATCGGAAAGGAGGGGGAAAACTTTATTGCTGATGCCCCCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGt < 1:121389/234‑1 (MQ=255) ttCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGcc > 1:380627/1‑173 (MQ=255) tCCTGAAAACAAG‑TTGTTCTCGTTATCGGAAAGGAGGGGAGAAACTTTATTGCGTATCCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTgcgc < 1:36977/236‑1 (MQ=255) ccaaaaagCAGG‑TGGATCTAGTTATCGGAAGGGAGGGGGAAAACTTGATGGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTGCGcc < 1:454780/232‑1 (MQ=255) ccTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTgcgc > 2:435362/1‑235 (MQ=255) ccaaaaaCCAGTTTGATCTCGTAACCGAGAGTGAGGGGGAAACTTTTATTGCTGGCCAACCCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTGCGcc < 2:430617/233‑1 (MQ=255) tGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTGCGccc > 1:148014/1‑235 (MQ=255) ggCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTGCGCCCAGTCCAGTGAGATATTCTGTTGaaa > 1:659283/1‑236 (MQ=255) | TGCAGCATTAAATCCCAGGTTGACGTCAGCTCGCCCTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTT‑CTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATT‑ACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAG‑TTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGAGGAAATCGGGAGAATTACGCCACTTCTGACGCCGCGCTATCTAACAGCGCCATCTCTTCGCTGTTCAGCAGTTTTTCGATGTTCACCAGAATCAACATCCGGTCGCCCAGTGCGCCCAGTCCAGTGAGATATTCTGTTGAAA > NC_000913/1972507‑1972963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |