Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,781,1400AG21.7% 329.3 / 25.8 167intergenic (+123/‑75)lldD/trmLL‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base A (80/50);  new base G (0/36);  total (80/87)
Fisher's exact test for biased strand distribution p-value = 5.91e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 173 total aligned reads displayed.

CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACG  >  NC_000913/3781041‑3781236
                                                                                                     |                                                                                                
  ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAgg                                                                                                <  2:2369568/100‑1 (MQ=255)
  ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAgg                                                                                                <  2:5459597/100‑1 (MQ=255)
  ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAgg                                                                                                <  1:3382158/100‑1 (MQ=255)
   tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAggg                                                                                               <  1:1473201/100‑1 (MQ=255)
      cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCg                                                                                            >  2:1057291/1‑100 (MQ=255)
      cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCg                                                                                            >  1:262463/1‑100 (MQ=255)
      cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCg                                                                                            >  1:1860948/1‑100 (MQ=255)
       ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCTCC‑CCTC‑CGGGGAGAGGGCCgg                                                                                           >  2:590747/1‑100 (MQ=255)
       ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGCGAGGGCCgg                                                                                           >  1:4761288/1‑100 (MQ=255)
       ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCgg                                                                                           >  1:4288380/1‑100 (MQ=255)
       ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCgg                                                                                           <  1:438326/100‑1 (MQ=255)
       ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCgg                                                                                           >  1:4711859/1‑100 (MQ=255)
        cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCggg                                                                                          <  1:1338084/100‑1 (MQ=255)
        cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCggg                                                                                          >  1:1230475/1‑100 (MQ=255)
         tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCgggg                                                                                         <  1:997821/100‑1 (MQ=255)
         tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCgggg                                                                                         <  2:1959672/100‑1 (MQ=255)
         tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCgggg                                                                                         <  1:3433861/100‑1 (MQ=255)
          cAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGt                                                                                        >  1:2812070/1‑100 (MQ=255)
          cAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGt                                                                                        <  1:2781870/100‑1 (MQ=255)
           aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTg                                                                                       <  1:5412151/100‑1 (MQ=255)
              gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAgg                                                                                    <  1:1046957/100‑1 (MQ=255)
              gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCCGGGTGAgg                                                                                    <  2:5276974/100‑1 (MQ=255)
              atctggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAgg                                                                                    <  2:1583800/96‑1 (MQ=255)
               agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAggg                                                                                   <  1:3554757/100‑1 (MQ=255)
               agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAggg                                                                                   <  2:3432596/100‑1 (MQ=255)
               agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAggg                                                                                   <  1:2417563/100‑1 (MQ=255)
               agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCCCGGTGAggg                                                                                   <  2:383526/100‑1 (MQ=255)
                gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAgggg                                                                                  <  2:5143371/100‑1 (MQ=255)
                gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAgggg                                                                                  <  1:2093978/100‑1 (MQ=255)
                  ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGaa                                                                                >  1:3297035/1‑100 (MQ=255)
                  ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGaa                                                                                >  2:3843506/1‑100 (MQ=255)
                  cgggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGCAACGACACCGCACTATTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGCGCCGGGGTGAGGGGaa                                                                                >  2:1324501/2‑100 (MQ=39)
                   gggACCGTTCTGCGCTGTATGTACTCCCCCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTCAGGGGaaa                                                                               <  2:1715048/100‑1 (MQ=255)
                    ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGaaaa                                                                              <  2:3137859/100‑1 (MQ=255)
                    ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGaaaa                                                                              >  1:719830/1‑100 (MQ=255)
                      acctgtCGGCGCTGTATGTACTCCCTCACTCTGAAACGAAACCGCACGCTTTTTTTCTCCCTCGCC‑CCGC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAgg                                                                            <  1:794302/95‑1 (MQ=38)
                       ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGc                                                                           >  1:3140105/1‑100 (MQ=255)
                       ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGc                                                                           >  1:27072/1‑100 (MQ=255)
                        cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGcc                                                                          <  2:3209400/100‑1 (MQ=255)
                         gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCg                                                                         >  1:5119253/1‑100 (MQ=255)
                            cGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCAc                                                                      >  1:45246/1‑100 (MQ=255)
                             ggCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACt                                                                     >  1:2657347/1‑100 (MQ=255)
                               cgcTGTATGTACTCCCTCCCTCGAAAACGACACCGCCCTCTTTTTTTCCCCCCCGCC‑CCTC‑CGGGGAGGGGGCCGGGGGGGGGGGAAAAGGCCGCACTGc                                                                   <  2:1669790/100‑1 (MQ=255)
                                 cTGTGTGTCCCCCCTCCCTCGGAAACGACCCCCCCCCCTTTTTTCCCCCCCCCCC‑CCCC‑CGGGGGGGGGGCGGGGGGGGGGGGAAAAGGCCGCACTGCTc                                                                 <  1:1537370/100‑1 (MQ=255)
                                 cTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTc                                                                 >  2:5061128/1‑100 (MQ=255)
                                  tgtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCTGGGTGAGGGGAAAAGGCCGCACTGCTCa                                                                >  1:2667973/1‑100 (MQ=255)
                                   gtttgtaCCCCCTCACTCTGAAACGGCCCCGCCCTCTTTTTTCCCCCCGGGCC‑CCCC‑CGGGGGGGGGCCGGGGGGGGGGGGAAAAGGCCGCACTGCTCAc                                                               <  2:3470035/97‑1 (MQ=255)
                                   gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAACAGTCCGCACTGCTCAc                                                               >  2:3656493/1‑100 (MQ=255)
                                       gtcctccctccCTTTAAACCGACCCCGCCCTTTTTTTTTCCCCCCCCCC‑CCTC‑GGGGGGGGGGGCCGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAAt                                                           <  1:2469899/97‑1 (MQ=255)
                                       gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGCGAGGGGAAAAGGCCGCACTGCTCACCAAt                                                           >  2:2232747/1‑100 (MQ=255)
                                       gtaCCCCCTCACTGTGAAGCGCCACGGCACTGTTTTTCCCGCACTCGCC‑CCCC‑CGGCGGGAGGCCCCGGGCGGGGGGAAAAGGCCGCACTGCTCACCAAt                                                           <  2:501766/100‑1 (MQ=255)
                                        taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTTTTTTTTGCA‑CCTC‑CGAGGAGAGGGCCGGGGAGAGGGGAATAGGCGGCAGTGATCACCAAtt                                                          >  2:3103799/1‑100 (MQ=255)
                                        taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACGGCTCACCAAtt                                                          >  1:538504/1‑100 (MQ=255)
                                          cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt                                                        >  2:2544042/1‑100 (MQ=255)
                                           cccctccctCTGAACCGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCCC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc                                                       <  2:2849909/99‑1 (MQ=39)
                                            cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt                                                      >  1:2007025/1‑100 (MQ=255)
                                             ccccACTCTAAAACGACCCCCCCCTCTTTTTTCCCCCCCCCCC‑CCCC‑CGGGGAGGGGCCCGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg                                                     <  1:12663/97‑1 (MQ=255)
                                             ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg                                                     >  1:4165490/1‑100 (MQ=255)
                                              ccccctcgGAAACGCCCCCGCACTTTTTTTTCCCCCCCCGCC‑CCTC‑GGGGGAGGGGGCCGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGc                                                    <  1:4841603/96‑1 (MQ=255)
                                               tCACTCTAAACCGCCCCCGCACTCTTTTTTCCCCCCGCGCC‑CCCC‑CGGGGGGGGGCCCGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCt                                                   <  1:286428/100‑1 (MQ=255)
                                                   tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                               >  2:4500570/1‑100 (MQ=255)
                                                    ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                              >  1:1039436/1‑100 (MQ=255)
                                                      gAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCtcc                                            >  1:4629914/1‑98 (MQ=255)
                                                         aCGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                         >  1:4123182/1‑100 (MQ=255)
                                                          cGACCCCGCACCCTTTTTTTCCCCCCCGCC‑CCCC‑GGGGGAGGGGCCGGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc                                        <  2:296205/100‑1 (MQ=255)
                                                             cacCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGCCAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCACTTTTCTGCTATCCTGCCCCCGCa                                     >  2:4641420/1‑100 (MQ=255)
                                                             cacCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                     >  2:3316882/1‑100 (MQ=255)
                                                              ccggCACTCTTTTTTCCCCCCGCGCC‑CCGC‑GGGGGGGGGGCCCGGGGTGGGGGCAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc                                    <  2:1590225/97‑1 (MQ=255)
                                                               cccccctctTTTTTCCCCCCCCGCC‑CCCC‑CGGGGAGGGGGCGGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                   <  2:2840880/95‑1 (MQ=255)
                                                               ccGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                   >  1:4325388/1‑100 (MQ=255)
                                                               ccGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                   >  1:2192668/1‑100 (MQ=255)
                                                                  cACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAg                                >  2:1171138/1‑100 (MQ=255)
                                                                   attctTTTTTCCCCCCTCCCC‑CCCC‑CGGGGAGGGGCCCGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGTCCCCGCACTAAgg                               <  2:5046957/98‑1 (MQ=255)
                                                                    ctctTTTTTTCCCCCCCCCC‑CCTC‑GGGGGGGAGGGCGGGGGGGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                              <  1:3537676/100‑1 (MQ=255)
                                                                    acctTTTTTTCCCCCCGGCCGCCCC‑GGGGGAGGGGGCGGGGGGGGGGCGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgn                               <  1:1622317/98‑2 (MQ=255)
                                                                     tttttttttCCCCCCCCCC‑CCTC‑GGGGGAGGGGGCGGGGGTGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                             <  1:3831461/98‑1 (MQ=255)
                                                                     tctTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                             >  2:3415852/1‑100 (MQ=255)
                                                                     tctTTTTTTCTCCCTCGCC‑CCTC‑CGGGAGGAGGGCCGGGGTGACGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCTGCACTAAgggg                             >  1:4903307/1‑100 (MQ=255)
                                                                     tctTTTTTTCCCCCT‑GCC‑CCGCGGGGGGGGCGGGCGGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                             <  1:170223/100‑1 (MQ=255)
                                                                      ctTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg                            >  2:1767107/1‑100 (MQ=255)
                                                                       tttttttCCCCCTCGCC‑CCTC‑CGGGGAGAGGCCCGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc                           <  1:2466530/100‑1 (MQ=255)
                                                                        tttttcCCCCCTCGCC‑CCCC‑GGGGGGGGGGGCGGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa                          <  1:3909661/100‑1 (MQ=255)
                                                                         tttttCTCCCCCGCC‑CCCC‑GGGGGGGGGGGCGGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg                         <  1:5224069/100‑1 (MQ=255)
                                                                            ttCTCACTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                      >  2:788764/1‑100 (MQ=255)
                                                                            ttCCCCCCCGCC‑CCTC‑CGGGGGGGGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                      <  2:4569879/100‑1 (MQ=255)
                                                                            tcctcCCTCGCC‑CCGC‑GGGGGAGGGGGCCGGGTGGGGAGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                      <  1:1350756/98‑1 (MQ=255)
                                                                               tcCCTCGCC‑CCCC‑CGGGGGGGGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAtagc                   <  2:273147/100‑4 (MQ=255)
                                                                               cccccCGCC‑CCTC‑GGGGGAGGGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                   <  2:2054215/99‑1 (MQ=255)
                                                                                cccTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCATGCCCCCGCACTAAGGGGGCAGTATGCTa                  >  2:4351448/1‑100 (MQ=255)
                                                                                 ccccGCC‑CCCC‑GGGGGGGGGGGCCGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                 <  2:4085898/97‑1 (MQ=255)
                                                                                 ccTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                 >  1:635141/1‑100 (MQ=255)
                                                                                  cgcccc‑cccc‑GGGGGGGGGGGCGGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                <  1:1071475/96‑1 (MQ=255)
                                                                                     gCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt             >  1:2553582/1‑100 (MQ=255)
                                                                                         ccTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt          >  2:4440050/1‑100 (MQ=255)
                                                                                          cTC‑CGGGGAGAGGGCCGGGGTGAGGGGAACAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa         >  2:5441621/1‑100 (MQ=255)
                                                                                          cTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa         >  2:4616031/1‑100 (MQ=255)
                                                                                            tcgggggggggggCGGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc        <  1:1033945/97‑1 (MQ=255)
                                                                                                gggAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa    <  2:4764329/100‑1 (MQ=255)
                                                                                                 ggAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc   >  1:118939/1‑100 (MQ=255)
                                                                                                  gagaGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg  >  1:294773/1‑100 (MQ=255)
                                                                                                     |                                                                                                
CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC‑CCTC‑CGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACG  >  NC_000913/3781041‑3781236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑