| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,206,446 | 0 | C | A | 36.2% | 94.4 / 17.9 | 47 | intergenic (‑190/‑17) | ttdR/ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (6/24); new base A (6/11); total (12/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCA > NC_000913/3206208‑3206677 | tttCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATAc < 1:1176045/239‑1 (MQ=255) ttCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACa < 1:84648/239‑1 (MQ=255) tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGGA‑ATTTTTTTGACAAAAACaaacaaagaa > 2:2325002/1‑232 (MQ=255) tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGAA‑TTTTTTCAATcaaaaacaaaaaacgga > 1:179717/1‑234 (MQ=255) aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTgg < 1:1102390/237‑1 (MQ=255) aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTgg < 1:693140/237‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 2:1527800/238‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 2:55233/238‑1 (MQ=255) tATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGtaat < 1:1617361/234‑1 (MQ=255) tATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGtaat < 1:1880964/234‑1 (MQ=255) aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATGTAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAgg < 2:2198259/236‑1 (MQ=255) tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGtaat < 1:2174313/221‑1 (MQ=255) tATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGTACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTTCAGAAAAAAAAAAAAAATTGAGGTGCCCTGATGATGGGAAAG‑AAAAAACAAAAAGC‑AATGAATaaat > 1:1223206/1‑237 (MQ=255) tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAgaga < 1:2341643/238‑1 (MQ=255) tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAgaga < 1:2325002/238‑1 (MQ=255) cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGGAG‑TTTTTTCA‑ACAAAAACAAAAAATAGAGTTGCGCTGTTGA‑GGGAAAGTAAAAAAAAAAAATA‑AGTGAAGAAAATGACAAGGATTGtgcgca > 2:418391/1‑233 (MQ=255) tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAg < 1:1186341/168‑1 (MQ=255) cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAg < 1:1847863/146‑1 (MQ=255) cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 1:1913677/162‑1 (MQ=255) ttttcattcTTTTTTTGAGGTTGATCAACGAATTGTTAATTACATATTCACGGTGAAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGC‑GGTGAT‑TTTTTCAAAAAAAATAAAAAAACGGGAGTTGCCATGAGGA‑GCAAAAGAAATAAGCAACAGGA‑AGTAAATAAGTGGACAGAGATGGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGa < 2:1313602/237‑1 (MQ=255) tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGc < 1:1086980/164‑1 (MQ=255) tATTTTCGTTTGGATTCAAGAACGGTTAATGAAATACTCCAGGTGTCAAAAAATAAACAACCTCAGTTTTAGTTATAGTTTGGGGT‑GGGAAA‑TTTTTAGACAAAATTAAAAAAATAGGGTTAGCAAGAAGGA‑GTGAAAGTAAAAAACAACAGCT‑TGCTAATAAGTAGAGGGTAATTGAGAAAATCTGATCCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa < 2:1629341/239‑1 (MQ=255) tgtatCACCAAATGTTAATTATATACTCGCGGTTGCAAAAAATATAAACCCACATTTTGAGTGGTAGTTTGTGGG‑GGTGAT‑TTTTTCCAGAAAAATAAAAAAACTGGAGTTGCAATGAAGA‑GCAAAAATAATAAGCAAAAGGC‑AGTGAAAAATGGAACAGATGTTATCCCTAAGTTTCCCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGGGGATAAACTAAAACAGCTAAAGGa < 2:1256377/235‑1 (MQ=255) tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATAc < 1:901497/86‑1 (MQ=255) tACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACa < 1:1557466/80‑1 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGA‑TTTTTTCAAAAAAAAAAAAAAAAATGGGTTGGCATGATGA‑GGGGAAGTAATAAGCAAAAAGC‑AGGGAATAAGATGAAAGAAATTTTCTCCAAATTTTCCCCCCCGA‑TTTTTTCCCGAAAGCCTGGTGACGGGGTGGGTAAACAAAAACAACTAAAAGAAGTCGGTAcgtcgcgggatggggg > 2:885196/1‑228 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGGA‑TTTTTTCCAACAAAAAAAAAAAACTGAGTTGGCATTATTA‑GGGGAAAAAATAAAAAAAAAGC‑AGAGAATAAATTTACAAAGAATGTTGCCAAACTTAACGCCCAGA‑TTTCTTCCCGAAAACCTGATTAAGTGGGGGGTAAACTAAAAAAACTAAAAAAAGCGCGAACATCGTCGATggggga > 2:2314102/1‑237 (MQ=255) aCGGTGAAAAAAAATATAAACCCAAATTTTGAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAAACAAATAAAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt < 2:1223206/239‑1 (MQ=255) cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGAA‑TTTTTTCATACAAAAACAAAAACCgggg > 2:1557466/1‑78 (MQ=255) ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGa < 1:18438/127‑1 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAATTTTTTCCAAACAAA‑AAAAAAAAAGGGGTTGGCCTTCTGG‑GGGGAAAAAATAAACAACAAGCAAGGGAAAAAATGAAAAGA‑AATGTTGCTAACATTTTCGCCCCGATTTTTTTCCCAAATCCCT‑CTGAAGTGGGGGGTAAAATAAAACAACTAAAAGATGCCGGAACCGAGTGGATGGGGGGAAATATCt > 2:909866/1‑239 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACa > 1:1671244/1‑127 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTAGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACa < 2:1671244/127‑1 (MQ=255) aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGGA‑ATTTTTTAAACAAAAACAAAAAAAGGGGGTGGCATGATGG‑GGGGAAATAAAAAACAAAAAGG‑AGGGAAAAAATTTACAGAGAtttt > 2:18438/1‑125 (MQ=255) aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGGGAA‑ATTTTTTAGACAAAAAAAAAAAAAGGAGTTGCCATGATGA‑GGGGAAGTAATAAACAAAAAGC‑AGTGAAAAAGATGACAGAGAATGTCGCTAAATTTATCGCCCTGA‑TTTCTTTCCGAATGCCTGTTGAGGGGGGGGGTAAAATAAAAAAGCTAAAAGATGTCGCAAAGTCGTCGATGGGGGGAAATATATAACATaaa > 2:206519/1‑237 (MQ=255) tataAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGaa < 1:435215/107‑1 (MQ=255) acaTTTTTAGTGGTAGTTTGGGGC‑GGTGAA‑TTTTTCCAGAAAAATAAAAAAACTGGAGTTGCCATGATGA‑GCAAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGAAAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa < 1:885196/239‑1 (MQ=255) aTTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAg < 1:760243/56‑1 (MQ=255) aTTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCg < 1:2007584/71‑1 (MQ=255) aTTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGATGA‑GCAAAAGTAATAAGCAACAGGC‑AGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGa < 1:2252305/145‑1 (MQ=255) tttAGTGGTATTTTGAGGC‑GGTGAT‑TTTTTCCAGAAAAATAAAAAAACGGGAGTTGCCTTGATGA‑GCGAAAGTAAAAACAAACAGGC‑AGTGAAAAATTGGCCAGAGATTGCCGCTAACTTTACCGCCATGA‑TTTc < 1:338705/135‑1 (MQ=255) ttAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGa < 1:1328337/100‑1 (MQ=255) gTAGTTTGTGGC‑GGTGAA‑TTTTTTCCGAAAAAAAAAAAAAAAGGGGTTTGCATGATTG‑GGGGAAGAAATAAAAAAAAAGC‑AGGGAAAAAATTGAAAGAGATTTTTGCTAAATTTTACGCCAACA‑TTTTTACCCCAATGCCtgatg > 2:2252305/1‑145 (MQ=255) attttGTGGC‑GGTGAA‑TTTTCCCAGACAAATAAAAAAACTGGATGTGCAATGATGG‑GCAAAAGAAAAAAGAAACAGGA‑AGTAAAAAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 1:858466/237‑1 (MQ=255) ggggC‑GGTGAA‑TTTTTCCAGAAAAATAAAAAAGCGGGAGTTGCCATGATGA‑GGGAAAGTAATAAGCAACAGGA‑AGTGAATAAGTTGACAGAGATTGTCGCCAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 1:419262/237‑1 (MQ=255) ggggC‑GGTGAA‑TTTTTCAAGAAAAATACAAAAACGGGATTTGCCATGATGA‑GCAAAAGTAAAAAGCAACAGGC‑AGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 1:493421/237‑1 (MQ=255) tttttCCAAAAAAATAAAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcc < 1:1584932/239‑1 (MQ=255) ttcccAGACAAATAAAAAAACTGGAGTTGCCATGATGA‑GCAAAAGTAAAAAGAAACAGGC‑AGTGAATAAGTTGAAAGAGTTTGTCGCTAATTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg < 1:2177507/236‑1 (MQ=255) ccAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGt > 1:1231906/1‑232 (MQ=255) aaaaaaacaaaaacGGGTGTTGCCATGAGGA‑GGAAAAAAAAAAAGCAACGGGC‑AGTAAATAAGTTGACAGAGTTTGTCGTTATTTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa < 2:1058650/237‑1 (MQ=255) aaaTACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGtaat < 1:357663/40‑1 (MQ=255) | TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGAA‑TTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGC‑AGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGA‑TTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCA > NC_000913/3206208‑3206677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |