| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 827,507 | 0 | T | G | 32.3% | 150.3 / 12.7 | 65 | D492A (GAC→GCC) | ybhF | putative ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base T (3/41); new base G (21/0); total (24/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.33e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGA > NC_000913/827283‑827744 | aCTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGGGACGCCgcacgac > 2:342542/1‑233 (MQ=255)aCTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGGGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGTGGGGGGGGACGCCCGAAgga > 2:710039/1‑237 (MQ=255) aTAAAAGCTTGATCCGTGGTGGTTTCCGGTTGCTCATCGTTAGCCATCTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACGCCAGGCCGATGCGGTCGCAATATTCCGCGTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGtt < 2:2118939/238‑1 (MQ=255) gCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTtcgtc < 1:1190373/236‑1 (MQ=255) tggtggGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGGACGCCCGGAGGCGGTGTGTC‑GGGGAAAAGaaac > 2:1190373/1‑237 (MQ=255) tggGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTc < 1:342542/238‑1 (MQ=255) ggATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGCAACGCCGGAAGTAGGGTCGTC‑GGGAGAAAGAATgg > 1:917440/1‑234 (MQ=255) ttAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGCAACGCCGGAAGTCGGGTCGTC‑GAGAAACAGAATGTCCGGGTCATGGATCAGCGaaaa > 1:1811865/1‑237 (MQ=255) tAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTc < 1:1040855/217‑1 (MQ=255) cGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGgcca < 1:834980/239‑1 (MQ=255) cTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGTGGGGGGGGACGCCCGGACGCGGGTCCGC‑GTGAAAACGAAAGTCCGGGTGATGGATCAGAGAACaaagccag > 2:2363959/1‑231 (MQ=255) ttCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCg < 1:1965380/239‑1 (MQ=255) aaTTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGt < 1:424701/239‑1 (MQ=255) aGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGa < 1:201124/235‑1 (MQ=255) cGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTGCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCAGGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑t‑ttt < 1:1084364/238‑1 (MQ=255) tGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAAAGCCGGGAGTCGGGTCGTC‑GAGGAAAAGAAAGTCCGGTTCATGCATCAGCGAACAAGCCAGCGCCCGCCCCCGGTTA‑AAAACTAAAGGGA‑GGGTGTCGGGGGCGGGGGGGGGGGGAC‑t‑ttttcg > 2:1900316/1‑235 (MQ=255) tGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCCACGCCGGCAGGTGGGTCGTC‑GAGAAAAAGAATGTCCGGGTCTATCATCAGCGAAAAAGGCAGCGCCAGCCGCCGTTTA‑AAAACTCATGGCA‑GTTCATCAGGGGCGTGGGGGGGGGTAC‑T‑TTTcca > 2:679426/1‑236 (MQ=255) gCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACg < 1:679426/239‑1 (MQ=255) aaTATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCAAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGc < 1:574864/238‑1 (MQ=255) ttCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATg < 1:1491656/238‑1 (MQ=255) cATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGGGCACGCCGGGAGGCGGGTTGTCGGGGAAAAAAAAGGGCCGG‑TCATGCATTCGCGAACAGGCCCACGCCCGCCGCCGTTTT‑AAAACTAATAGCA‑GTTCATCGGTGGCGGGGGGGGCGGGACAT‑TTTCAGACC‑A‑AACGCC‑CCCTCATT‑Cgg > 2:1820082/1‑239 (MQ=255) ccATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTa‑a < 1:699035/168‑1 (MQ=255) gtgggtggTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTtcg < 1:334486/100‑1 (MQ=255) ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGGCAACGCCGGGAGTCGGGTCGTC‑GAGAAAAAGAAAGTCCGGGTTATTCATCAGCGAACAGGCCCCGGCCAGCCCCCGTTTT‑AAAACCAAttg > 2:699035/1‑166 (MQ=255) ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCCACGCCCGAAGTCGGGTCGTC‑GAGAAACAGAATGTCCGGGTCATGCATTAGCGAACAGGCCAGCGCCCGCCGCCGTTTT‑AAAACTAATGGCC‑GTTTATCGGCGGCGGGGGGGGGGGTAC‑T‑TTTTCTGCC‑GAAACGCC‑CGCCCCTG‑CGGGGGAGTTTTTTGt > 2:1351180/1‑239 (MQ=255) ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGAAGTCGGTTTCTC‑GAGAAACAGAAAGGCAGGTTCATGCATCCCCGCACAGGCCCGCGCCAGCCCCCGTTTAGAAAACAAATGCCG‑GGT‑AACCGTGGCGTGGGGGGGGAGAA‑C‑TTTTACGCC‑G‑CAAGCCCCGCTCCTA‑CGGGGGAGTGTTTTGt > 2:2067130/1‑239 (MQ=255) tggtgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTa‑a < 1:1535285/156‑1 (MQ=255) aCCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGaa < 1:840904/126‑1 (MQ=255) aCCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAAAGCCGGGAGGCGGGTCGTC‑GAGaaaaa > 2:334486/1‑98 (MQ=255) cATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATg < 1:1659119/114‑1 (MQ=255) tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGcc > 1:432602/1‑67 (MQ=255) tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGcc < 2:432602/67‑1 (MQ=255) tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGGGACGCCGGGAGGCGGGGCGTC‑GGGAAAAAGAAAGTCCGGTGCTTGCATCCGCGAAAAGggcaggg > 2:840904/1‑124 (MQ=255) gACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGt < 1:1351180/238‑1 (MQ=255) gACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGt < 1:707569/238‑1 (MQ=255) gACGCCTTTCTCTACCATGCTGTGGATGGGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGGTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGt < 1:901076/238‑1 (MQ=255) aCGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAACGCCGGGAGTCGGGTTGTC‑GAGAAACAGAATGTCCGGTTCATTCCTCAGCGaa > 2:1659119/1‑114 (MQ=255) cGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAg < 1:1900316/239‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTc < 1:538791/89‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCa < 2:1689256/96‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATg < 2:1111672/98‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATa < 1:1016467/239‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATa < 1:740528/239‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATa < 1:2067130/239‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGTGGGGGGCCACCCCCGGAGTCGGGGTCTC‑GAGAAACAGAATGGTCGGGTCCTGCATTAACGCAACGGCCCACGCCACCCCCCGTTTA‑AAAACTACAGGCC‑GGTTATCGGTGGGGGGGGGGGGGGGAC‑TATTTTAGGCG‑C‑AAGCCCCCCCCCATG‑GGGGGGGTTTTTTTG‑TCTGCGCCCGACCCCGCCAGcccca > 2:1969818/1‑236 (MQ=255) ctctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑aa < 1:2013338/183‑1 (MQ=255) tACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTtcgtc‑g < 1:2214034/70‑1 (MQ=255) tACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGgaga < 1:1099830/200‑1 (MQ=255) tGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGGAGGCGGGTCGTC‑GAGAAACAGAAAGTGCGGGTCATGc > 2:538791/1‑89 (MQ=255) tGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAAAGCCGGGAGTCGGTTCGTC‑GGGAAAAAGAATGGCCGGGTTATGCATCAGCgca > 1:1111672/1‑96 (MQ=255) tGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGCAAAGCCGGGAGGCGGTTTGGC‑GAGAAAAAGAATGTCCGGTTTATGCATCAgtg > 1:1689256/1‑94 (MQ=255) gCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAgaga < 1:1227651/239‑1 (MQ=255) cTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGTCAACGCCCGAAGTCGGGTTGTC‑GAGAAAAAGAATGTCCGGTTCATGCATCAGCGGAAAGGCCAGCGCCAGCCGCTGTTTA‑AAACCCAATTGCAGGTTCTTC‑GTGGGGGGGGGGGGGGTAC‑T‑TTTTCCGCC‑G‑CACGCCCCGccc > 2:2013338/1‑181 (MQ=255) cTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTc > 1:2175040/1‑77 (MQ=255) cTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTc < 2:2175040/77‑1 (MQ=255) ttGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AATCCTAATGGCA‑GTTCGTCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGtt < 1:2282048/200‑1 (MQ=255) ttGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAgg < 1:494860/151‑1 (MQ=255) ttGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGgaga < 1:286696/190‑1 (MQ=255) ttGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAACGCCGGGAATCGGGTTTTC‑GAGAAAAAGaa > 2:2214034/1‑70 (MQ=255) ttGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGCAACGCCGGAAGGCGGGTCGTC‑GAGAAAAAAAATGTCCGGGTCCTGCATCAGCGGACAGGCCAGCGCCCGCCGCCGGTTT‑AAAACTAATGGGA‑GGTCCTTGGGGGGGGGGGGGGGGATAC‑T‑TTTTCGGCCGG‑AACGCC‑CGCCCCTGCCGGGGGATTTTTT‑GTTTTTCGCCCCCACCCGCAACCCCAACACACCACAGaaaaa > 2:2055537/1‑239 (MQ=255) gtgCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGtt < 1:413459/195‑1 (MQ=255) aaaTTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGtt < 1:2112408/239‑1 (MQ=255) gggTGGTGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCGGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGt < 1:935781/235‑1 (MQ=255) gggTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGt < 1:362816/235‑1 (MQ=255) gggTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGt < 1:1037406/235‑1 (MQ=255) tCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGAt < 2:526451/119‑1 (MQ=255) tCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGAt > 1:526451/1‑119 (MQ=255) tCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTaga > 2:632590/1‑238 (MQ=255) tCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCAGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTaga < 1:946457/238‑1 (MQ=255) | ACTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTC‑GAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTA‑AAACCTAATGGCA‑GTTCATCGGTGGCGTGGGAGGCGATAC‑T‑TTTCAGGCC‑G‑AACGCCTCGCTCATG‑CGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGA > NC_000913/827283‑827744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |