| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,101,514 | 0 | G | T | 25.0% | 117.5 / 12.0 | 49 | intergenic (+84/‑176) | sodA/kdgT | superoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter |
| Reads supporting (aligned to +/- strand): ref base G (5/31); new base T (12/0); total (18/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.88e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCG > NC_000913/4101276‑4101738 | tttCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTtg > 1:1174594/1‑239 (MQ=255) gcgcTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTtgggcaca > 1:1649111/1‑233 (MQ=255) tCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTc < 2:1174594/239‑1 (MQ=255) gCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGTTCCAATTTC‑AAATAAAAACAAAAATc‑c > 2:1407151/1‑239 (MQ=255) tGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGat < 1:1407151/239‑1 (MQ=255) tgtgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGAt < 1:695740/228‑1 (MQ=255) tgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTACAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTCTGTT‑CCATTTCTCAATAAAAAAAAATATC‑CGat‑aaacaaga > 2:1425163/1‑234 (MQ=255) tgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATaa > 2:2027482/1‑216 (MQ=255) tgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATaa < 1:2027482/216‑1 (MQ=255) gAACATGATTACTCCCGGAAATTCCAGACCCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGat‑aaaaataaaa < 2:1144552/238‑1 (MQ=255) aaCATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATAGCCAACGGCGGCGGGTTTTTTTTGTT‑CTATTTCTAACTAAAAA‑AACTATCACGct‑aaaaataataa > 2:1999028/1‑235 (MQ=255) tGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGAtg < 1:754157/239‑1 (MQ=255) tGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGAtg < 2:1820318/239‑1 (MQ=255) tCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTg < 1:960620/230‑1 (MQ=255) aCCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTGTTTTTTTGAT‑CAATTTTAAAAAAAAAAACATGATC‑CGAA‑AAAAAAAAAAAA‑AAGGTTCAAATGATTGGGTTTTgtac > 1:977648/1‑235 (MQ=255) ccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTGTGGT‑TAAATTTAAAACAAAAAAAAAAGAC‑AGAC‑AAAAATAAAAAA‑AAGGTTCAACAGATGTGGtata > 2:960620/1‑227 (MQ=255) gTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 2:2025970/239‑1 (MQ=255) tCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGat < 1:1409570/193‑1 (MQ=255) aTTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGTG‑CAATTTCTAAAAAAAAAAAAAGAGA‑CGat‑aaaaaaaaaa > 2:1409570/1‑193 (MQ=255) tAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGT‑CAAATTTAAAATAAAAACAAAGAAT‑CGCT‑AAAAAATAAAAA‑ACCTTTTAATTTGTGTGGGTTTGTTTACTTTTTTTGCTTaaaataa > 2:1954762/1‑235 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAAAAAAAAA‑ACGGTTTAATTTATGTGGGTTTGTTCACTTTTTTTTTTTAAATGAAATTCTAt > 1:324023/1‑239 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGAT‑CAAATTCAAAATAAAAAAAAAGATA‑CCAT‑AAAAAAAAAACA‑GCGGTTCAATTGATGTGGTTTTTATAACTTTTATTTATTAaatgaatg > 1:875190/1‑234 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTAGGTTTTTTGTGAT‑CAATTTCAAAATAAAAACAACAATC‑CAAT‑AAAAATAAAAAACGGGTTTC‑ATTGTTGTAGGTTTGATAACTTTTATTCATTAaacgaatgatt > 2:1629695/1‑234 (MQ=255) tCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATc < 1:423494/239‑1 (MQ=255) aCGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt < 1:1954762/239‑1 (MQ=255) aCGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt < 1:1610260/239‑1 (MQ=255) tggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGGT‑CAATTTTTAAATAAAAAAAAAAATA‑CGAA‑AAAAAAAAAAAA‑ACGTTTCAATTAGTGTGGTTTTTGTTACTTTTTTTGTATAAAATAAAGTTTATTTTTGttt > 2:1596721/1‑237 (MQ=255) ggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTcc < 1:1596721/238‑1 (MQ=255) gAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATc < 1:110050/238‑1 (MQ=255) aCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCaa < 1:605338/238‑1 (MQ=255) cGAATCAGCGGCACGTTTTGCGGCGAAAAAAGAATCATTTGCCGCCTGGTGCAATGAGGCGGATAGGCCGCATATCAGCTTAAAAAAAGAACCAACGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATg < 2:196898/239‑1 (MQ=255) tttGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAAtt < 1:260092/238‑1 (MQ=255) tttGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAAtt < 1:1999028/238‑1 (MQ=255) cgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCaa < 1:1567997/208‑1 (MQ=255) gAAAAAAGAATCAGTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg < 1:891112/239‑1 (MQ=255) aaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCt < 1:1108214/239‑1 (MQ=255) atCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGAT‑CAATTTCAAAATAAAAAAAAAACTC‑CGTT‑AAAAATAAAAAA‑GCGGTTCAATTTATGTTGGTTTTATCCCTTTTTTTGATTTAATGAATGTCTATCTTCGTTTTTATTCACACTGATTCt > 2:1567997/1‑208 (MQ=255) tgctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCAt < 1:973107/182‑1 (MQ=255) gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTGTTTTTTGCT‑CAATTTTACAAAAAAAACAAAGATA‑CAATAAAAAACAAAACA‑‑AGCTTCAAATTTTGTGGGTTTTAGTACTTTTTTTGGTTAAAAAAAAGAGTATATTCTTCTTTATGAACACAGATGCTCCCCTATGGAAATACGCATCCGCCCCTTAAAATATTCCGCGAGGCGGTGGAAAAGc > 2:1441017/1‑239 (MQ=255) tataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGa < 1:255721/220‑1 (MQ=255) tataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGc < 1:221069/236‑1 (MQ=255) taGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATaaaaaaaa > 1:192159/1‑79 (MQ=255) taGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACaa < 2:192159/79‑1 (MQ=255) gCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGAT‑TCATTTTAAAAAAAAAACAAAGATC‑CGCT‑AAAAATTAAAAA‑AAGTTTTCATTTTAGGGGGTTTGTTCCCTTTTTTTTATTTAATGAATGTCTTTc > 2:1530039/1‑151 (MQ=255) atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGGT‑CAATTTTAAAATAAAAAAAAATAAC‑CGAA‑AAAAATAAAAAA‑ACGTTTTAATTGATTTGGGTTTGAACAATTTTATTGTTTAAAAGAAAGGTTATTTTCGTTTTCATTAAAACTGATGCTCCATTTGGGAATTAAGCATCAGCCCCTAAAAATATGCCGACAGGTGATGGGAATTCAAATAAAAc > 2:221069/1‑235 (MQ=255) atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGAT‑CAAATTCAAAATAAAAACAAAAATC‑CGAT‑AAAAATAAAACA‑GCGTTTTAATTTATGTGGTTTTTATAACATTTATTTATTAAAAAAAAGACTATCTTCGTTTCCATCAAAACTGATGCTCCCTTTAGGAATATAGCATCAGCCCCTAAAAAAATACCgcaacgggatgg > 2:255721/1‑209 (MQ=255) atCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGa < 1:1247914/239‑1 (MQ=255) aaaTGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTc < 1:627085/158‑1 (MQ=255) aTGAACCATAGCCAACGGCTGTGGTTATTTTGGTAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATAACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAAGATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATccc < 2:67755/239‑1 (MQ=255) cAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 1:2091950/98‑1 (MQ=255) cggTTGTTTTTTTGTGAG‑CAAATTCCATATTAAAACAATGATT‑CGAT‑AATAATAAAACA‑GGGTGTCAATTGATGGGGTTTTGCTCACTTTTTTTGATTAAATGAATGTTTATCTTCTGTTACAACAACACTGATGCTCCATTGAGGAAGTACGAATCAGCCCTTAAAAATATGCCGACAGGTGGTGAAAATGCAGATAAAACGCGCGATTGAGAAAATCCCGGGGGGGATGATGcgcg < 2:1649111/238‑1 (MQ=255) | TTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAT‑CAATTTCAAAATAAAAACAATGATC‑CGAT‑AAAAATAAAACA‑GCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCG > NC_000913/4101276‑4101738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |