| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,606,793 | A→G | 5.1% | Q115R (CAG→CGG) | zntA → | zinc, cobalt and lead efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,606,793 | 0 | A | G | 5.1% | 288.0 / 2.1 | 103 | Q115R (CAG→CGG) | zntA | zinc, cobalt and lead efflux system |
| Reads supporting (aligned to +/- strand): ref base A (52/43); new base G (4/2); total (57/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTG > NC_000913/3606647‑3606936 | aGAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTCCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGCCATTCGCGTACAATGGGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAgg < 2:889759/149‑1 (MQ=255)aGAAAATGCCGTGCGCCAGCTTGCAGGCGGGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAgg < 1:552897/149‑1 (MQ=255)aGAAAAGGCCGTGCGCCCGCTCCCAGGGCTGAATCAGGTGCAGGTGTTGTCCGCCACCGAAAAACTGGTGGTCGACGCCGACAATGCCATTCGTGCACAAGTCGAAAATACGCAGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAgg < 2:399611/149‑1 (MQ=255) gAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCTGTG‑AACAGgc > 2:319710/1‑149 (MQ=255) gAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGgc > 1:1265779/1‑149 (MQ=255) aaaaTGCCGTGCGCCAGCTTGCAGGCGAGAATCAGGTGCAGGTGTTGTTCGCCACCGAAACACGGGTGGTCGATGCCGACACTGACATTCGTGAACCACTTGAATCTGCGCTGAAACAGGCAGGACATTCCCGGCACGCTG‑AAGAGgcc > 2:344602/1‑149 (MQ=255) aaTGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACGGgccgc > 2:472372/1‑149 (MQ=255) aaTGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCCCGATG‑GACGggcggc > 2:472329/1‑149 (MQ=255) gCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCga < 1:446114/149‑1 (MQ=255) ccGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCgaa < 2:54289/149‑1 (MQ=255) ccGGGCGCCAGCTTGCAGGCGTGAACCAGGGGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCgaa < 2:109909/149‑1 (MQ=255) gTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCgaaga < 2:437769/149‑1 (MQ=255) tGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCgaagaa > 1:1253937/1‑149 (MQ=255) tGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCgaagaa > 1:1301574/1‑149 (MQ=255) tGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCgaagaa < 1:1068620/149‑1 (MQ=255) cgcCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAACAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAAcc > 1:1242524/1‑149 (MQ=255) cgcCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTAGGGGGCGACGCCGGCAATGACATTCGTGCACAAGTGGACTCTGCGCTGCACAAAGCGGGCTATCCCCGGCGCGATG‑CACAGGCCGCCGAAGAAcc > 2:289669/1‑149 (MQ=255) gcCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACCGGTGGTCGACGCCGACAATGACATTCCCGCCCAAGTTGAATCTGCGCTGCAACAAGCAGGCTATTCCCAGCGCGATA‑AACAGCCCGCGGAGAAACCg > 2:214467/1‑149 (MQ=255) ccAGCTTGCAGGAGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGc > 1:973353/1‑149 (MQ=255) aGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGCTGCCGAGAACGACATTCGTGCACACGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCCCGCTG‑GACCGGCCGCCGGAGGAACGcca > 2:97213/1‑147 (MQ=255) aGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGCTG‑AACAGGCCGCCGAAGAACCGCaa > 1:514501/1‑149 (MQ=255) gCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGAAGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCGGCAGAAAGCAGGCGAGTACCTGCGCGATG‑AACGGGCCCAGGAGGAGCCGCAAg > 2:1044762/1‑149 (MQ=255) gCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGGGGTCGATGCCGACAAGGCCAGTAGTGCACAAGTAGAATCTGCGCAGCACAACGCAGGCTATTCCCTGTGAGATG‑AACAGGCGCCCGAAGAACCGCAAg > 2:1044912/1‑149 (MQ=255) cTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGc < 1:561346/149‑1 (MQ=255) aGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCGTCAc > 1:465732/1‑149 (MQ=255) ggCGTGAATCAGGTGCAGTTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACg > 1:994216/1‑149 (MQ=255) cGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGCTG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGcc > 1:1042192/1‑149 (MQ=255) aaTCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGaa < 1:1277075/149‑1 (MQ=255) aTCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCGCGCCTGaag > 1:681460/1‑148 (MQ=255) tCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGCTGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGACGAACCGCACGCATCACGCGCGAAag > 2:1116754/1‑149 (MQ=255) tCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGAGG‑AACAGGCCGCCGAAGAACCGCCAGCATCACGCCTGAAag > 2:935608/1‑149 (MQ=255) tCAGGTGCAGGTGTTGTTCACCACCGAAAAACTGGTGGTCGATGCAGACAATGACATTCGTGCACAAGTTGGATCTGCGCTGCAAAAAGCAGGCTATACCCCGCCCGATG‑AACAGGCCGCCGACGAACAGCCCACATGACGCCCGaagg > 2:917466/1‑147 (MQ=255) tCAGGTGCAGGTGTTGATCGCCACCGAAAAACTGGTGGTCGATGCCGAAAATGGCATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCCAGACCGAGCGCGGGG‑AACAGGCCGCCGAGGAACCGCAAGCATCACGCCTGAAag > 2:953912/1‑149 (MQ=255) caggtgcaggtgTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAaga < 2:1095738/149‑1 (MQ=255) tccaggggTTGTTCGCCACCGAAAACCTGGTGGTCGATGCCGACAATGACATTCGTGCACACGTTGAATCTGCGCAGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAAt < 2:693306/147‑1 (MQ=255) caggtgTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAGTAACATTCGTGCAGAGGTTGAATCTGCGCTGCAAACAGCAGGCTATTCCCTGCGCGATG‑AACAGGCTGCCGAAGAACCGCAAGCATCATGCTTGAGAGGGaagca > 2:888999/1‑146 (MQ=255) gtgtTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGcc > 1:851944/1‑149 (MQ=255) gttgttCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGc < 1:1250220/149‑1 (MQ=255) ttgttCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCt < 1:1341368/149‑1 (MQ=255) ttCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACACGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AAAAAGCGGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTAAt > 1:405165/1‑149 (MQ=255) cGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTa < 1:892849/149‑1 (MQ=255) gCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTAc > 2:286995/1‑149 (MQ=255) gCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTAc > 2:462543/1‑149 (MQ=255) ccACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGACGAACCGCAAGCATCACGCCTGACAGAGAATCTGCCGCTGATTACg > 2:879344/1‑149 (MQ=255) ccACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACg > 2:1164525/1‑149 (MQ=255) cACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGc < 1:502747/149‑1 (MQ=255) aCCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGACTGCAAGTGAATCTGCCGCTGATTACGCt > 1:911712/1‑149 (MQ=255) cGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGCAGAACCGAAAGCATCACGCCCGAAAGAGAATCTGCCGCTGATTACGCTaa > 2:1181864/1‑149 (MQ=255) gAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAAt > 1:1187353/1‑149 (MQ=255) aaaaCTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCg < 1:290075/149‑1 (MQ=255) aaCTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCCTGACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGtg > 1:1043010/1‑149 (MQ=255) aaCTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGACCATTCACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGtg < 1:717631/149‑1 (MQ=255) acgggtggtCGACGCCGACAATCACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGtga < 1:809693/146‑1 (MQ=255) acgggtgggCGAGGCCGACAAGGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGtga < 2:1130550/146‑1 (MQ=255) accggtggtCGATGCCGACAATGACATTCCTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGtga < 1:365279/146‑1 (MQ=255) aCTGGTGGTCGAGGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGTCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGtga < 1:912792/149‑1 (MQ=255) gtggtCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAGAAAGCAGGCTATTCCCTGGGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTgatgat > 1:1282054/1‑149 (MQ=255) tggtCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGGGAATCGGCCGCTGATTACGCTAATCGTGatgatg > 2:1086291/1‑149 (MQ=255) tggtCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGatgatg > 2:1236731/1‑149 (MQ=255) gtCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGc < 1:352485/149‑1 (MQ=255) ccGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGc > 1:330311/1‑149 (MQ=255) ccGACAAGGACATTCATGCACAAGTTGAATGTGCACTGCAAAAAGCAGGCTATTATTAGGCACCTG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGc < 1:316330/149‑1 (MQ=255) cGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGGGAATCTGCCGCTGATTACGCTCATCGTGATAATGGCAATCAGCt > 1:155412/1‑149 (MQ=255) gACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTg < 2:186124/149‑1 (MQ=255) aCAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTgg < 1:11823/149‑1 (MQ=255) cAAAGACATTCATGTACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACTCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTggg < 2:877235/149‑1 (MQ=255) aCATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGACGGCAATCAGCTGGGGTCTg < 1:981514/149‑1 (MQ=255) cATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTgg > 1:540833/1‑149 (MQ=255) aTTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGa > 1:1295955/1‑149 (MQ=255) ttCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGGGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAg > 2:413930/1‑149 (MQ=255) cttGCGCAAGTTGGAACTGCGCCGCAAAAAGCAGGCTATCCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCa < 2:471930/147‑1 (MQ=255) cGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCa < 1:161127/149‑1 (MQ=255) tGCACAAGTGGAGTCTGCGCTGCAAAAAGCAGGCTATGCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCGGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGt < 2:323957/149‑1 (MQ=255) gCACAATCTTAAGCTGCGCCGCAAAAAGCAGGCTATTCCCTGCACGATG‑AGCCTGCCGCCGAAGAACCGCCAGCATCACTCCTGAAAGAAAATCTGCCTCTGATTACCCCAATCGTGACTATGGCAATCAGCTGGGGTCTTTAGCAGtt < 2:651633/149‑1 (MQ=255) gCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGtt < 1:192029/149‑1 (MQ=255) cacaAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTc < 2:1341618/149‑1 (MQ=255) aGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACGGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAatc < 1:472372/149‑1 (MQ=255) aGTTGAACCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACGGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAatc < 1:472329/149‑1 (MQ=255) ttGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGTTG‑AAAAGGCGGCCCAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAatcat < 1:1321532/149‑1 (MQ=255) ttGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTGATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAagcat > 2:403776/1‑149 (MQ=255) ttGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAatcat > 1:1228743/1‑149 (MQ=255) ttGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCCGAAAGAGAATCTGCCGCTGATTACGCCAATCGTGATGATGGCAAACCGCTGGGGTCTGGAGCAGTTCAatcat > 2:1058415/1‑149 (MQ=255) tCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTGATCGTGATGATGACAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGtt > 1:1292110/1‑149 (MQ=255) cTGCGCTGCAAAAAGCAGGCTATTCCATGC‑AGTTGAAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTc > 1:328050/1‑149 (MQ=255) tGCGCTGCAAAAGGCAGGCTATTCCCTGCGCGATG‑AGCAGGCCGCCGAAGAACCGCAAGCATCACGACTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGATCAGTTCAATCATCCGTTCg > 2:400798/1‑149 (MQ=255) tGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCg > 1:154674/1‑149 (MQ=255) cgcTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCggg < 2:1253937/149‑1 (MQ=255) cgaaaaGCAGGCGATTCCCTGCGCGATG‑AACAGGCCACCGAAGAACCGCAAGCATCGCGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACt < 2:603609/147‑1 (MQ=255) cAAACAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCAAAGAACGGCAAGCGTCACGCCTGAAAAAGAATCTGCCGCTGATTACGCTAATCGTGCTCAAGGCAATGAGATGGGGGCTGGAGCCGTGCAATCATACGTTggggacact > 2:209834/1‑144 (MQ=255) ggCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTAt > 1:554191/1‑149 (MQ=255) gCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATc > 2:551002/1‑149 (MQ=255) gCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATc > 1:689984/1‑149 (MQ=255) cTACTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATcg < 2:688511/149‑1 (MQ=255) aTTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATATGTCTTGTTCGGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGGTTATggcg > 1:38961/1‑149 (MQ=255) ttCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGa < 1:286995/149‑1 (MQ=255) ttCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGACTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGa > 1:849786/1‑149 (MQ=255) tCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGAc < 1:462543/149‑1 (MQ=255) cTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCGACTGGCGTTTATCGCGACCAc > 2:1284230/1‑149 (MQ=255) aTG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGtt < 1:411148/149‑1 (MQ=255) tG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTg < 1:666877/149‑1 (MQ=255) | AGAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATG‑AACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTG > NC_000913/3606647‑3606936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |