| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,269,032 | G→T | 11.5% | intergenic (+13/+136) | kdsA → / ← ldrA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase/toxic polypeptide, small |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,269,032 | 0 | G | T | 11.5% | 187.0 / 4.1 | 70 | intergenic (+13/+136) | kdsA/ldrA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase/toxic polypeptide, small |
| Reads supporting (aligned to +/- strand): ref base G (30/31); new base T (7/2); total (37/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCCGGATCCGGAACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTA > NC_000913/1268886‑1269180 | atccggatccggAACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGaa > 2:239849/1‑149 (MQ=255) cggatccggaACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGaaaaa > 2:268445/1‑149 (MQ=255) gatccggaACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGCACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATa < 2:1224324/149‑1 (MQ=255) tGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTcgcg > 1:595566/1‑149 (MQ=255) tGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCg > 1:595343/1‑149 (MQ=255) gCGAAAGGTGATGGTCCATCCGCGCGGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGACAGCGATTGTTGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAAGAAAGTATTAGCGt > 1:525256/1‑149 (MQ=255) gAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAACAAGTAATCTTTGTTGCTTGAAACAGAAAGTATTAgggggc > 2:845507/1‑144 (MQ=255) aaaTGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCt < 2:208942/149‑1 (MQ=255) aaTGTGGTGGTCCCTCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCTGAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTg < 1:1126496/149‑1 (MQ=255) tgtgATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCGTCAAGAAGAAAAAAGCGATTGATGAACTGAAGGACGGTTTTGAGGAAATGGATTCCAGCAAGGAATTTTTTCTTCTAGAAAAATAAAGGATCATCGTTCTGCg > 2:788872/1‑149 (MQ=255) gtgATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGGTGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAACGTATTAGCGTTCTGCGt < 2:998594/149‑1 (MQ=255) gATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCGGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAGAAAAAAAGTATTAGCGTTTTGCATTa > 2:277845/1‑149 (MQ=255) gTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGAc > 1:388279/1‑149 (MQ=255) ccATCCGGGGTGCCGCTGGCTAACCTGGAACCGTTCCGCAAGCAGATGAAAGCGATTGATGAGCTGGTGAAAGGCTTCCAAGAACTTGATACCCGCAAGTAATGTTTTTTGCTTGAAAAACAAAGTATTTGCGTTCTGCGTTAAGACtt < 2:615152/149‑1 (MQ=255) ctcTGCCGCTGGCTAACCTGGAGCCGTTCCTCAAGCAGATGACAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCAt < 2:435431/147‑1 (MQ=255) cgcTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGATCTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCAt < 2:324012/149‑1 (MQ=255) ccGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTTTAGTATAAAGTATTAGCGTTCTGCGGTAAGACTTTTTTCGtgtgtg > 2:1104673/1‑149 (MQ=255) gCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGcc > 1:23499/1‑149 (MQ=255) cTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCg > 1:1204352/1‑149 (MQ=255) cTGGCTAAACTGGAACCGGTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATCCCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCg < 2:781608/149‑1 (MQ=255) ggCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTCTTGCTTTAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑Ga < 1:1055781/149‑1 (MQ=255) cTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATa < 1:409860/149‑1 (MQ=255) tAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATAc > 1:1222425/1‑149 (MQ=255) tAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATAc > 1:433699/1‑149 (MQ=255) tAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATGATCGTTCTGCGTTAAGACTTTTTTCATGGGTGACG‑GATAc > 1:1223184/1‑149 (MQ=255) tgAACCGGTCCTCAAGCCGATGAAAGCGATTGATGATCTGGTGAAAGGGTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACaaaaaa < 2:194032/148‑1 (MQ=255) cGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCg < 1:784862/149‑1 (MQ=255) tCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTTAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCt > 2:496600/1‑149 (MQ=255) agagGAAAGCGATTGATGACCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTAcc < 1:416581/149‑1 (MQ=255) aGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAGCTGGATACCAGCAAGGATTCTTTTGTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTAcc < 1:1118864/149‑1 (MQ=255) aGATGAAAGCGATTGATGATCTGGTGAAAGGTATCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTAcc > 2:627299/1‑149 (MQ=255) aaGCGATGGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCg < 2:525256/149‑1 (MQ=255) aTTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAACTAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAATGGCCGCAGACTGTTACGCCTGCGGCCgg > 2:1346279/1‑149 (MQ=255) aTTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCgg > 2:1346261/1‑149 (MQ=255) atgatCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATTGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTc > 2:462254/1‑149 (MQ=255) gatCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTTAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCgg > 2:965091/1‑149 (MQ=255) gatCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCAACGGAAAGACTTTTTT‑ATGAGTCAAGAAACTCTAAAAAGGGAGCAGTCACTTACTCCTGCGGCCGGTTTCgg > 1:642458/1‑149 (MQ=255) gacTGGGGAAAGTTTTACAAACACCGGCTACCAGCCAGTAATCTCTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg < 2:229358/147‑1 (MQ=37) atCTGGTGAAAGGTTTCGAAGAACCGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg > 1:1004466/1‑149 (MQ=255) atCTAGTGAAAGTTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg < 2:140601/149‑1 (MQ=255) ggTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa > 2:189352/1‑149 (MQ=255) tGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCGCCGGCCGGTTGCGGGCGCata > 1:368748/1‑149 (MQ=255) aGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTTTTTTTATTTTAAAGTATTAGCGGTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGc > 2:454254/1‑149 (MQ=37) aGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTAGCCCTGCGGCCGGTTTCGGGCGCATATTGc < 1:836528/149‑1 (MQ=255) aGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGc < 2:97614/149‑1 (MQ=255) gTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTTTTTTTAAAATAAAGTATTAGCGTTCCGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGGGGCCGGTTTCGGGCGCATATTGCCa > 1:732202/1‑149 (MQ=38) ttCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGCATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc < 2:388279/149‑1 (MQ=255) aagaaCTGGATACCAGCAAGTAATCTTTTTTTCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGACCGGACTCGAGCGCATATTGCCGTCGCgg > 2:715853/1‑149 (MQ=38) aagaaCTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACgg < 1:32016/149‑1 (MQ=255) cTGGATACCAGCAAGTAATCGTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCC‑GATACAAACAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGcc < 1:289577/149‑1 (MQ=255) tGGATACCAGCAAGTAATCTTTTTTTTTTTTTTTTTAAAGTATTAGCGGTCTGCGTTAAGACTTTTTTCATGGGTGGCG‑GATACAAAAAAGGCCTCCGGCTTTTACCGCTGCGGCCGGTTTCGGGCGCTTTTTTCCATTACCGCAGctt > 2:276577/1‑147 (MQ=19) cAGCAAGTAATTTTTTTTGCTTTAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGccc < 1:496600/149‑1 (MQ=255) cAGCAAGTAATCTTTTTTTTTTTTTTTTTAAAGTATTAACGTCCTGCGTTAAGACTTTTTTCATGGGGGCCG‑AATACAGGAAAGGCCGCAGGCTGTTACCCCTGAGGCCGTTTTCGTTCGCTTATTGCCATAACGGCCGCCTGACGccc > 2:674642/1‑149 (MQ=16) cAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCTGCCGGAATCGGGCGCAAATTGCCATCACGGCAGCCTGACGccc > 1:849867/1‑149 (MQ=255) aGCCAGTAGTCTTTTTCGCCTGAAAAATAAAGTATTAGCGGTCTGCGTCAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCCGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCg < 2:150841/149‑1 (MQ=25) aGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGCCGCCCg > 2:65094/1‑149 (MQ=255) cAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGtt > 1:1075693/1‑149 (MQ=255) tAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCa > 1:360667/1‑149 (MQ=255) tAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCATCCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCa < 1:1273980/149‑1 (MQ=255) aaTCTTTTTTGCTTGAAAAATAAAGTATTAGCGGTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAc < 1:239849/149‑1 (MQ=255) tCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTAATGGGTGGCG‑TATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCCCGGCCGCCTGACGCCCGTTTTCACCt > 2:622692/1‑149 (MQ=25) ttttttTGTTGAAAAATAAAGTATTGGCTGTCTGCGTTAAGATCTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGTATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTa < 2:60983/149‑1 (MQ=18) ttttttGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTa < 1:1165482/149‑1 (MQ=255) tttgttGCTTGAAAAATAAAGTATTAGCGTTATGCGGTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCGGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTa < 2:732154/149‑1 (MQ=255) tttttGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc > 1:1186947/1‑149 (MQ=255) gCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCg < 1:189352/149‑1 (MQ=255) cTTGAATCATAACGTAGTTGCGTTCTGTCGTATGCGTCTTCTCATGGCTGCCG‑GATACAAAAAAGGCCGCAGGCTGGTACCCCGTCCGCCGGTTTCGCGCGCCTATTGCCATCACGTCAGCCTGACGCCCGTTTTCCCCTTACTTCCgg < 2:1335417/149‑1 (MQ=255) cTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCgg < 2:1204352/149‑1 (MQ=255) cTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCgg < 1:627299/149‑1 (MQ=255) tGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGtt > 2:344832/1‑149 (MQ=255) gAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTa < 2:595343/149‑1 (MQ=255) gAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTa < 2:23499/149‑1 (MQ=255) gAAAAATAAAGTATTAGCGTGCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTa < 2:595566/149‑1 (MQ=255) | ATCCGGATCCGGAACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAATCTTTTTTGCTTGAAAAATAAAGTATTAGCGTTCTGCGTTAAGACTTTTTTCATGGGTGCCG‑GATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTA > NC_000913/1268886‑1269180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |