New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1997426 =36 (0.800)5 (0.110) 3/268 NT 13.0% coding (389/753 nt) yecC putative ABC transporter ATPase
?NC_000913 1997455 = 32 (0.730)coding (360/753 nt) yecC putative ABC transporter ATPase

CAGCTCTGGATCCAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACAAACCCGACGTGCTGACGCA  >  NC_000913/1997278‑1997567
                                                                                                                                                    |                                                                                                                                              
ttcattaagtcagcaaaaatctctgattcgccagttgcgtcagcacgtcgggtttgtcttccagaactttaatttgtttccgcatcgtacggggccggagaacatgattgaagggccggtgatcgtccaagggggaccgaaagcagagg                                                                                                                                                <  2:230603‑M1/1‑1 (MQ=255)
 aGCTCTGGATCCAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGGCGCGTATCGTGGCCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGc                                                                                                                                               <  1:382455/149‑1 (MQ=255)
   ctctGGATACAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTGAACCTGCCAGCACACCTTATGccc                                                                                                                                             >  2:421621/1‑148 (MQ=255)
         aTCCAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCCCACGCGCAATCGCCACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGATGGTTTCTTTACCTGCCAGACCAACTTTTGCCCGCAGCt                                                                                                                                       >  1:755328/1‑149 (MQ=255)
           ccAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCAAGCGCGCGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTcg                                                                                                                                     <  1:750151/149‑1 (MQ=255)
            cAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTcgc                                                                                                                                    <  2:458869/149‑1 (MQ=255)
            cAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTcgc                                                                                                                                    >  1:767972/1‑149 (MQ=255)
            cAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCACAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTcgc                                                                                                                                    >  2:675304/1‑149 (MQ=255)
                  tGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAgcgc                                                                                                                              >  1:59868/1‑149 (MQ=255)
                       ttGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGcc                                                                                                                         >  2:653440/1‑149 (MQ=255)
                       ttGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGcc                                                                                                                         >  2:613912/1‑149 (MQ=255)
                         attcgccagttgcgtcagcacgtcgggtttgtcttccagaactttaatttgtttccgcatcgtacggtgctggagaacattattgaagggccggtgatcgtcaaaggtgaaccgaaagaagagGCCAGCAGCTCGCGAGCGCGCGCCG‑t                                                                                                                      >  2:86571‑M1/124‑149 (MQ=255)
                               tCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGAGCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCctc                                                                                                                >  1:549625/1‑149 (MQ=255)
                               tCAAACAAAATCAACTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACAGGCTGCTGTTGACCGCCGGACAAACGACGTGGATAGATGGTATCCGTATCTTCCTGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCctc                                                                                                                >  1:546795/1‑149 (MQ=255)
                                  ttgcgtcagcacgtcgggtttgtcttccagaactttaatttgtttccgcatcgtacggtgctggagaacattattgaagggccggtgatcgtcaatggtgaaccgaaagaagagGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCtcttc                                                                                                             >  2:428230‑M1/115‑149 (MQ=255)
                                  ttgcgtcagcacgtcgggtttgtcttccagaactttaatttgtttccgcatcgtacggtgctggagaacattattgaagggccggtgatcgtcaaaggtgaaccgaaagaagagGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCtcttc                                                                                                             >  2:348062‑M1/115‑149 (MQ=255)
                                  tggcgtcagcacgtcgggtttgatttgcggaacttgaatttgtttcggcatcgtacggggctggagaacattattgaagggccggtgatcgtcaaaggtgaaccgaaagaagagGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCtcttc                                                                                                             >  2:726974‑M1/115‑149 (MQ=255)
                                     aaaaTCCCCTCAGGGCGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCttt                                                                                                          <  2:56963/149‑1 (MQ=255)
                                     aaaaTCACCTCAGGACGCATGGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAACAGCTCGCGAGCGCGCTCCG‑TGGCCTCTTCttt                                                                                                          <  1:500482/149‑1 (MQ=255)
                                        aTCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACCCGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCgg                                                                                                       <  1:256200/149‑1 (MQ=255)
                                           aCCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGCCGTGGATAGCTGGTTTCTTTACCTGCCAGCCCCACTTTTGCCCGCAGCTCGCGAGCGCGCGCCG‑TGGCCCCTTCTTTCGGTTc                                                                                                    >  2:720129/1‑149 (MQ=255)
                                           aCCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTc                                                                                                    >  1:691557/1‑149 (MQ=255)
                                            ccTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCGGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCa                                                                                                   >  2:748926/1‑149 (MQ=255)
                                            ccTCAGGACGCATTGCCAGAGCACGCGCAATCGCAAAACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCGAGCAGCCCGCGCGCGCCCGCCG‑TGGCCCCTTGTTTTCGTTCa                                                                                                   >  2:154085/1‑149 (MQ=255)
                                                       aTTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGAt                                                                                        <  1:747749/149‑1 (MQ=255)
                                                               cgcACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGcc                                                                                <  1:68607/149‑1 (MQ=255)
                                                               cgcACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGcc                                                                                <  2:464894/149‑1 (MQ=255)
                                                                  aCGCGCAATCGCAACACGCTGCTGTGGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCtt                                                                             <  1:325558/149‑1 (MQ=255)
                                                                  aCGCGCAATCGCAACACGCGGCTGTTGACCGCCAGAGAAACGACGTTGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCtt                                                                             <  1:688426/149‑1 (MQ=255)
                                                                         aTCGCACCACGCTGCTGTTGACCGCCAGACAAACGGCGTGGATAGCTGGTTTCTTGCCCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCaataat                                                                      <  1:784994/149‑1 (MQ=255)
                                                                         aTCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTAAATTCATGCCCAACTTTAGAATTATGCTCGCGAGCGCGCGCGG‑GGGGGTTTTGTTTCGGGTCTCCTTTGGCGATCACCGGGCTTTTaattat                                                                      >  1:190311/1‑149 (MQ=255)
                                                                             cAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGGCGATCCCCGGCCCTTCAATAATGTtc                                                                  >  2:364069/1‑149 (MQ=255)
                                                                                                          cgacgTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTCGTCGATCACCGGCCCTTCTATAATGTGCGCCAGCCCCGTACGATGCGGCAACAAAtt                                     >  2:387136/1‑149 (MQ=255)
                                                                                                           gacgTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTa                                    <  2:295976/149‑1 (MQ=255)
                                                                                                                   tAGCTGGTTTCTTTGCCTGCCAGGCCAACTTTTGCCAGCATCTTGCGGGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCGCCTTTGACGATCACCGGCCCTTCAATAGTGTGCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTg                            <  2:718775/149‑1 (MQ=255)
                                                                                                                     gcgggTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGa                          <  1:613912/146‑1 (MQ=255)
                                                                                                                     gCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGa                          <  1:653440/149‑1 (MQ=255)
                                                                                                                        ggTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGa                       <  2:50504/149‑1 (MQ=255)
                                                                                                                           ttCTTTACCTGCCAGCCCAACTTTTGCCAACAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACaa                    >  1:488388/1‑149 (MQ=255)
                                                                                                                                        ccgaaagaagagGCCA‑CGGCGCGCGCTCGCGAGCTGCTGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACAAACCCGACGTGCTg       <  1:767405‑M1/137‑1 (MQ=255)
                                                                                                                                          cccAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGGCAAACCCGACGTGCTGAc     >  2:696564/1‑149 (MQ=255)
                                                                                                                                          cccAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACAAACCCGACGTGCTGAc     <  1:675304/149‑1 (MQ=255)
                                                                                                                                           ccAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACAAACCCGACGTGCTGACg    >  2:391485/1‑149 (MQ=255)
                                                                                                                                             aaCTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCGCCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACAAACCCGACGTGCTGCCGCa  >  2:566494/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
CAGCTCTGGATCCAGCGCTGACGTTGGCTCGTCAAACAAAATCACCTCAGGACGCATTGCCAGCGCACGCGCAATCGCAACACGCTGCTGTTGACCGCCAGACAAACGACGTGGATAGCTGGTTTCTTTACCTGCCAGCCCAACTTTTGCCAGCAGCTCGCGAGCGCGCGCCG‑TGGCCTCTTCTTTCGGTTCACCTTTGACGATCACCGGCCCTTCAATAATGTTCTCCAGCACCGTACGATGCGGAAACAAATTAAAGTTCTGGAAGACAAACCCGACGTGCTGACGCA  >  NC_000913/1997278‑1997567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.