| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 83,587 | A→C | 5.7% | intergenic (‑58/+35) | leuA ← / ← leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 83,587 | 0 | A | C | 5.7% | 189.9 / 2.3 | 74 | intergenic (‑58/+35) | leuA/leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base A (25/43); new base C (3/2); total (29/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.43e-01 | |||||||||||
GCAGTTTTTCTTTCACACTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGA > NC_000913/83442‑83732 | gtaGTTTGTCTTACACACTGAGGCTTGCCTGTAACGCCTGTTCCCCGTCGCGCAAGGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTGGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATg < 1:210197/147‑1 (MQ=255) gTTTTTCTTTCACACTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGgcg < 1:689408/149‑1 (MQ=255) tttttCTTTCACACTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGgcgc > 1:1086706/1‑149 (MQ=255) tttcACACTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCGCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATCGAAAAACCCGCGCCATGGCGCGGGttt > 2:521941/1‑149 (MQ=255) ttcACACTCAAGCTTGCCTGTAACGCCTGCTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGtttt < 2:954735/149‑1 (MQ=255) tcACACTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGttttt > 2:248081/1‑149 (MQ=255) cccccTCAAGCTTGCCTGTAACGCCTGTTCCCAGTCGCGCAATGTGGTATCGCAGATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAGAAAAACCCGCGCAATGGCGCGGGtttttt < 2:634851/145‑1 (MQ=255) cacaCTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGtttttt < 2:201738/149‑1 (MQ=255) cccccccaGCTTACCTGTAACGCCTGTTCACCGCCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATTGCGCGGGTTCtttg < 2:202253/142‑1 (MQ=255) acacTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTtttg > 2:366929/1‑149 (MQ=255) acacTCAAGCTTGCCTGTAACGCCGGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGGttttttt < 2:283765/149‑2 (MQ=255) cccTCAAGCTTGCCTGTAACGCCTGTTCCCCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTtttgt < 1:566194/147‑1 (MQ=255) cacTCAAGCTTGCCTGTAACGCCTGTTCACCGCCGCGCAATGTGGGATCGAAAATAATGACTTGCTGGCTTATGGCTTGGGTCCTTGACTCTTATAGACCGCCCCGCTTCGGGCACAAAAAAACCCGCGCACTGGCGCGGGTTTtttgt > 2:125727/1‑149 (MQ=255) tCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTtttgtttg > 1:568035/1‑149 (MQ=255) tCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTCCTTGCCGCTGGCTTGGGTTCTTGACTCTTTGAGATGTCCTCGCATCGGGCTAAAAAAAACCCGGCCAATGCGGCGGGGTCtttgtttg > 2:389298/1‑149 (MQ=255) gcaGCTTGCCGGTAACGCCTGTTCACCGGCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGa < 2:846800/147‑1 (MQ=255) cTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGc < 2:160497/149‑1 (MQ=255) cTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTTTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCt > 1:399242/1‑149 (MQ=255) cTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCt > 1:962474/1‑149 (MQ=255) tGTAACGCCTGTTCACCGTCGCGCCATGTGGTATCGAAAATAAGGAGTTGCTGGGTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTg > 2:104916/1‑149 (MQ=255) tGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTg > 2:280342/1‑149 (MQ=255) gCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGCCTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTaa < 2:920949/149‑1 (MQ=255) gCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTaa > 2:688730/1‑149 (MQ=255) ttCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATgtgg > 1:819335/1‑146 (MQ=255) gtgcAATGCGGTACCGAAAATAATGACTTGCCGGCTCATGGTTTCGGTCCTTGCCTCTTTTAGAGCGCCTCGCGTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCt < 2:740496/147‑1 (MQ=255) gcgcAATGTGGTACCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCt < 1:1120802/149‑1 (MQ=255) cgcAATGTGGTGTCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTGCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGAGTGCGTGCTGGCTTAATGCTGGATGcaggtc > 2:280449/1‑144 (MQ=255) cAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCAc < 2:1013980/149‑1 (MQ=255) tgGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTc < 1:511588/149‑1 (MQ=255) gTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTTTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTa < 2:399242/149‑1 (MQ=255) tATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAACCCCGCGGGATGGCGCGGGTTTTTTGTTTGACTGCGTCCTGGCTTAATGCAGTAGGCAGCTCACCCGTCTat > 1:24464/1‑148 (MQ=255) gAAAATAATGACTTGCTGGCTCATGGTTTGGGTCATTCCCGCTGTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCCCTCACTCGACTACcgcg > 1:561887/1‑149 (MQ=255) aaaaTAACGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCgcgc > 2:464046/1‑149 (MQ=255) taatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaag < 1:751407/149‑1 (MQ=255) aatGACTGGCGGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCCCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaag‑a < 1:493089/149‑1 (MQ=255) ctcaCTTCCGGGCTCCTGGTTTGCTGCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAATCCCGCGCCATGGTGCGGGTTTTGTGTTTGACTGCGTGCTGGCTGAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaag‑aa < 2:214323/146‑1 (MQ=255) cTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATg < 1:626075/149‑1 (MQ=255) gCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGt < 1:280579/149‑1 (MQ=255) tGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGttt > 1:533477/1‑149 (MQ=255) ggCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTta < 1:518278/149‑1 (MQ=255) ggCTCATGGTTTGGGTCCTTGTCCCGTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTta < 1:521941/149‑1 (MQ=255) gCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTtag > 2:409511/1‑149 (MQ=255) cATGGTTGGCGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTtagtag < 1:156155/149‑1 (MQ=255) cATGGTCTGGGTCCTTGTCTCTTTTAGAGCGCTCCGCTTCGGGCATAAAAAACCACGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGATGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTtagtag < 2:637625/149‑1 (MQ=255) tgttttGGGTCCTTTTCTCTTTTAGGGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTtagtagta < 2:189258/146‑1 (MQ=255) tGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTtagtagta < 2:1086706/149‑1 (MQ=255) ggTTTGGGTCCCTGTCTCTTTTAGGGCGCCTCGCTTCGGGCATAAAACAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTtagtagtag < 2:846027/149‑1 (MQ=255) tttGGGTCTTTGCCTCTTTTAGAGCGCCTCTCTTTCGCCATCAACACACCCGCGCAATGGCGCGGGTTTTTTTTTTGACTGCGTGTTGGCTTAATGCTGGATGCCGCTCACGCGTCTTCCGCGCAAAG‑AAGTTGCGTTtagtagtagta < 2:544026/149‑1 (MQ=255) tGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGa < 2:453259/149‑1 (MQ=255) tGGCTCCTTTCCTCTTTTAGGCCTCCTCGCTTCCGGCATAAAAAACCCCGAGCAATGGTGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTTATGCTGGATGCCGCTCACTCGTCTAACGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGa < 2:1007632/149‑1 (MQ=255) tCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTGGACCGa > 1:16276/1‑149 (MQ=255) tCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGa > 2:1132852/1‑149 (MQ=255) tctcTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGc > 1:800819/1‑149 (MQ=255) ctctTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCg < 1:1132852/149‑1 (MQ=255) ctTTTAGAGCCCCCCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGC‑CACAGCAATATGCGTTTAGTAGTAGTAGACCGATAAAGCGaa < 1:562653/149‑1 (MQ=255) ttAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGa > 2:86835/1‑149 (MQ=255) tAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGAt < 2:568035/149‑1 (MQ=255) cagagCGCCTCGCATCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCGCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGAt < 2:112093/148‑1 (MQ=255) agagCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGAtg < 1:104916/149‑1 (MQ=255) ttCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTgaa > 2:776886/1‑149 (MQ=255) tCGGGCATAAAAAATCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATACAGCGAACGATGTGAGTCATTAAAt < 2:24464/149‑1 (MQ=255) tCGGGCATAAAAAAACCCGCGCAATGCCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAAt < 1:926289/149‑1 (MQ=255) cGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATc < 1:1063649/149‑1 (MQ=255) ggCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAg < 1:366929/149‑1 (MQ=255) gCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGc < 1:409511/149‑1 (MQ=255) cATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCt > 1:478556/1‑149 (MQ=255) acaaaaaaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAAAGCTGGATTCTGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTcc > 1:1023388/3‑149 (MQ=255) aaaaaaaCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAAGGATGAGAGTCATTAAATCAGCACCa > 2:501835/1‑149 (MQ=255) aaaaaaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAg > 1:363248/1‑149 (MQ=255) aaaaaaCCCGCGCAATGGCGCTGGTTTGTTGTTTGTCTTCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAg < 2:232331/149‑1 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTAAATCGTCTACCGCGCAGAG‑TAGAGTCGTTGAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAg < 1:1133543/149‑1 (MQ=255) aagcccGCGCAATGGCCCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATg < 2:481420/146‑1 (MQ=255) ccGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATg > 2:844108/1‑149 (MQ=255) cgcAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGa < 1:86835/149‑1 (MQ=255) | GCAGTTTTTCTTTCACACTCAAGCTTGCCTGTAACGCCTGTTCACCGTCGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAG‑AAGATGCGTTTAGTAGTAGTAGACCGATAAAGCGAACGATGTGAGTCATTAAATCAGCTCCAGATGAATGCGA > NC_000913/83442‑83732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |