New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1469240	NA (NA)	83 (0.980)	69/296	0.2	97.7%	intergenic (‑91/‑1)	insC1/ydbA	IS2 repressor TnpA/pseudogene, autotransporter homolog; interrupted by IS2 and IS30
	?	NC_000913	= 1652258	2 (0.020)					pseudogene (708/1158 nt)	intQ	pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related

CTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1469102‑1469240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGGCGAACT  <  NC_000913/1652258‑1652111                                                                                                                                                                                                                                                                                                   CTGTGTGGTACGCCGTCTGCGTTCCTCCGTGCCGAAGACATCAATC‑TCTCGATCGCCAATGACTAGTCTAAAACCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGA                                                                                                                                             <  1:1010865/149‑1  TGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTGTGGAGATTCAGGGGGCCAGTCTACTTAGTAAGAT                                                                                                                                            >  2:828888/1‑149      TGGTACGCCGTCTGCGTTTCCCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAAT                                                                                                                                        <  1:889564/149‑1            GCCCTCCGCGTTTTGCCGGCCTTAATAAAGTAATCATCT‑GGTCCCCAATGACTAGTCTAAAAACTAGTAGTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCG                                                                                                                                  <  2:105565/149‑1             CCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAACAAGATGAATGACCCGA                                                                                                                                 <  1:874351/149‑1               GTCTGCGTTTCTCCGGCCCTAAGACATCAATCACCA‑GTACACCAAAAAGTAATTTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATT                                                                                                                               <  1:457180/149‑1                  TGCGTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGT                                                                                                                            >  2:603591/1‑149                   GCGTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTT                                                                                                                           <  1:815836/149‑1                     GTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTCCTTAATAAGATGAATGACCCGATTGGTTCC                                                                                                                         >  1:399989/1‑149                     GTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCC                                                                                                                         <  1:348786/149‑1                          TCCGGCCCTAAGACATCAATCATCT‑GTTCTACAAGGACGAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCT                                                                                                                    >  1:1380504/1‑149                            ccGCCCTAAGACATCAACCACCT‑GTTCCCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACCTATTTAAGTGATATTGGTTGTCTGGACATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGT                                                                                                                  <  2:182207/147‑1                            CGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGT                                                                                                                  <  2:1035563/149‑1                             GGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGcg                                                                                                                 >  2:466417/1‑147                                 CTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGCCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTT                                                                                                             <  1:209352/149‑1                                 CTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTGCCCGCCTGTGTTTT                                                                                                             >  1:357266/1‑149                                  TAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTCTTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGGTTGGTTCCCGCCTGTGTTTTT                                                                                                            >  1:961641/1‑149                                   AAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTG                                                                                                           <  1:1267031/149‑1                                     GACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGT                                                                                                         >  1:1362652/1‑149                                      ACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAAGGACCCGATTGGTTCCCGCCTGTGTTTTTGGTA                                                                                                        >  2:781671/1‑149                                       CATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATGCAGGGGGCCAGTCTACTTAATAAGATGAATGACGCGATTGGTTCCCGCCTGTGTTTTTGGTAC                                                                                                       <  1:908590/149‑1                                       CATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACGAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCAGCCTGTGTTTTTGGTgc                                                                                                       >  1:913107/1‑147                                        ATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGCTTGGTTCCCGACTGTGTTTTTGGTACC                                                                                                      >  1:180941/1‑149                                           aagccTCT‑GTTCTCCAATGACGAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTG                                                                                                   <  1:628230/144‑1                                           AATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTG                                                                                                   >  1:215110/1‑149                                            ATCATCT‑GTTCTCCAAGGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATATGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGA                                                                                                  <  2:393301/149‑1                                               ATCT‑GTTCTCCAATGACTAGTCTAAAAACTTGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAAC                                                                                               >  1:732414/1‑149                                                       CTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGTCCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTT                                                                                        <  2:85611/149‑1                                                        TCCAATGACTAGTCT‑AAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTG                                                                                      <  1:430285/149‑1                                                          CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGC                                                                                     >  2:1088096/1‑149                                                              GACTAGTCTAAAAGCTAGTATTATGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAA                                                                                 <  2:877794/149‑1                                                              GACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTGTTGGTACCGTGAAACGGTCTTTTGCTAAA                                                                                 <  1:847292/149‑1                                                               ACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTGCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCATTTGCTAAAT                                                                                >  2:348353/1‑149                                                                   GTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATGAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGGTAACTTTCT                                                                            >  2:1149957/1‑149                                                                   GTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCT                                                                            >  2:201387/1‑149                                                                   GTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCT                                                                            <  1:283764/149‑1                                                                    tccAAAAACCAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTC                                                                           <  1:422666/146‑1                                                                    TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTC                                                                           <  1:1070937/149‑1                                                                    TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTC                                                                           <  2:917335/149‑1                                                                      TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCT                                                                         >  2:243282/1‑149                                                                      TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGGGTTTTTGGTACCGTGAAAGGGTCTTCTGCTAATTTGCTCCT                                                                         >  1:78194/1‑149                                                                      TAAAAACTAGTATTAAGACTATCACTTACTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGCTGAATGAACCGATTGGTTCCCGTCTGTGTTTTTGGTAAGGTGAAACGGTAGTTTGCTAAATTTATCCT                                                                         >  2:624679/1‑149                                                                         AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATAACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCCAAATTTCTCCTGAc                                                                      >  2:622920/1‑148                                                                           ACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCA                                                                    >  2:49863/1‑149                                                                            CTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCAT                                                                   >  2:1231567/1‑149                                                                             TAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCGGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATC                                                                  >  1:463745/1‑149                                                                              AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCA                                                                 <  1:541166/149‑1                                                                              AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCA                                                                 <  2:848899/149‑1                                                                              AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTAAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCA                                                                 <  2:848905/149‑1                                                                                  TTAAGACTATCACTTATTTAAGTGAAACCGGTTGTCTGGAGATTCAGGGGGCCAGTCGACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGGTTTTGGTACCGTGAAACGGTCTTTTGCTAAGTTTCCCCTGATCATCATTGT                                                             >  2:508899/1‑149                                                                                    AAGACTATCACTTATTTAAGGGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTC                                                           <  1:635533/149‑1                                                                                      gcCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTTAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCA                                                         <  1:415960/147‑1                                                                                             ACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCA                                                  <  1:1187251/149‑1                                                                                             ACTTAGTTAAGTGATATTGGTTCTCGGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCA                                                  <  1:301338/149‑1                                                                                             ACTTACGTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCA                                                  >  2:173107/1‑149                                                                                               TTATTGAAGTGATATTGGTTGTCTGGAGATTTCGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGA                                                <  2:423622/149‑1                                                                                               TTAGTTAAGGGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGA                                                <  2:805156/149‑1                                                                                                  TTTAAGTGATTTTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCT                                             <  2:74104/149‑1                                                                                                    TAAGTGCTATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCCTCATTGTTCCATTTTTCAGATCTAT                                           <  2:855228/149‑1                                                                                                     AAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATG                                          <  1:424703/149‑1                                                                                                        TGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCC                                       >  1:374347/1‑149                                                                                                            ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCC                                   <  2:1369758/149‑1                                                                                                            ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATG                                                                                                                                           >  1:722222/1‑45                                                                                                            ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATG                                                                                                                                           <  2:722222/45‑1                                                                                                                    TCTGGAGATCCAGGGGGCCAGTCCAATTAATAAGATGAAACACCCGCTTGTTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCCAACTTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGT                           <  1:263945/149‑1                                                                                                                      TGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTGTCTTTTGCACCTTTGTTAAATTTTTAATTTCTATGTCTTCCCATCCAAGTGC                         >  1:1361106/1‑149                                                                                                                       GGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCA                        <  1:21437/149‑1                                                                                                                         AGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCAGATTGGTTACCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGAACA                      >  1:1354152/1‑149                                                                                                                           ATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACA                    >  1:1059115/1‑149                                                                                                                            TTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG                   <  2:399989/149‑1                                                                                                                            TTCAGGGGGCCAGTCCACTTAATAAGATGCACGACCCGATTGGTTCCTGCCTGTGTTTTTGGTACCGTGAAACGGTGTTTTGCTAAATTTCTCCTTCTCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCGAAGTGCACACAG                   <  2:517537/149‑1                                                                                                                               AGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTC               >  1:1321044/1‑149                                                                                                                                 gtggtCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCTTCCCATCCAAGTGCACACAG‑CTCAC             <  2:1056614/144‑1                                                                                                                                 GGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCAC             <  1:245710/149‑1                                                                                                                                 GGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCAGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCAC             >  2:940278/1‑149                                                                                                                                   GGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCTTTTCTATTTCCTCCCATCCAAGTGCACACAG‑CTCACCA           >  2:204577/1‑149                                                                                                                                      CAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCAGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGG        <  1:940278/149‑1                                                                                                                                       AGTCCACTTAATAAGATGAATGGCCCGACTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGGC       <  1:693639/149‑1                                                                                                                                        GTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGGCG      >  1:915201/1‑149                                                                                                                                        GTCTACTTAATAAAATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAGATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCCGGGCG      >  2:969426/1‑149                                                                                                                                          CTACTTAATAACTTGCATGACCCGATTGGTTCCCGCCTGTGTTTTTTGTACCGTGAAACGGTCTTTTTCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGGCGAA    <  1:22865/149‑1                                                                                                                                            ACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCGATCCATTGGCAC‑CAGTCTCACCACGGCGAACT  >  2:434285/1‑149                                                                                                                                            ACTCAACAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGGCGAACT  <  2:395983/149‑1                                                                                                                                                                                                                                                                                                   CTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCT‑GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1469102‑1469240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG‑CTCACCAGGGCGAACT  <  NC_000913/1652258‑1652111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.