New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4542691101 (0.820)16 (0.140) 16/278 11.0 14.1% intergenic (+57/‑425) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
?NC_000913 = 4542987 100 (0.860)intergenic (+353/‑129) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

TCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACT  >  NC_000913/4542840‑4543130
                                                                                                                                                   |                                                                                                                                                
tCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAt                                                                                                                                                 <  1:130081/149‑1 (MQ=255)
tCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTAAAAAt                                                                                                                                                 >  2:47959/1‑149 (MQ=255)
   gtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGCTGCTTTCCTCTATGAGTCAAAATGGc                                                                                                                                              >  2:1844237/1‑149 (MQ=255)
     cgCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGccc                                                                                                                                            <  1:699965/148‑1 (MQ=255)
           aCGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATg                                                                                                                                      >  1:1677399/1‑149 (MQ=255)
             gCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGtt                                                                                                                                    <  1:345532/149‑1 (MQ=255)
             gCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGtt                                                                                                                                    >  2:1460248/1‑149 (MQ=255)
               aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc                                                                                                                                  >  1:1098366/1‑149 (MQ=255)
                  ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATc                                                                                                                              >  2:1571963/1‑149 (MQ=255)
                   tCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCt                                                                                                                             >  1:681967/1‑149 (MQ=255)
                   tCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCt                                                                                                                             >  1:1409349/1‑149 (MQ=255)
                     cTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTTTGAGTCAAAATGGCCCCAAATGTTTA‑ATCttt                                                                                                                           >  1:1462148/1‑149 (MQ=255)
                      tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCtttt                                                                                                                          >  2:1775570/1‑149 (MQ=255)
                       cATTCTTCTCTCCAAAAACCACCTCAAGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTCAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGCCCCCAAATGTTTC‑ATCTTTTg                                                                                                                         >  2:390866/1‑149 (MQ=255)
                        aTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTgg                                                                                                                        <  2:1635418/149‑1 (MQ=255)
                         ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAAGAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTggg                                                                                                                       <  1:6638/149‑1 (MQ=255)
                         ttcttcCCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAATATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTggg                                                                                                                       <  2:599158/149‑1 (MQ=255)
                            ttctCTCCAAAGACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ACCTTTTGGGGGa                                                                                                                    >  2:1605340/1‑149 (MQ=255)
                            ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGa                                                                                                                    >  1:226339/1‑149 (MQ=255)
                            ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATATTTTGGGGGa                                                                                                                    >  1:1468338/1‑149 (MQ=255)
                              ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGaaa                                                                                                                  >  1:216340/1‑149 (MQ=255)
                               tctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGaaaa                                                                                                                 >  2:418479/1‑149 (MQ=255)
                                 tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACt                                                                                                               <  1:832541/149‑1 (MQ=255)
                                 tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACt                                                                                                               >  2:1341670/1‑149 (MQ=255)
                                  ccAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTTATGGAGAAGTCAAAATGGACCCAAATGGTTC‑ATCTTTTGGGGGAAAACtg                                                                                                              >  1:470944/1‑149 (MQ=255)
                                   cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACtgt                                                                                                             >  2:723557/1‑149 (MQ=255)
                                   cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACtgt                                                                                                             <  1:270263/149‑1 (MQ=255)
                                   cAAAAACCACCTCAGGCAATATAAACATCGAAAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACtgt                                                                                                             <  1:1435104/149‑1 (MQ=255)
                                    aaaaaCCTCCTCATGCAATATAAACATCTAAAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACtgtg                                                                                                            <  2:1447874/149‑1 (MQ=255)
                                    aaaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAACCTGACAAGGCTTCTCCTCTATGCGTTCTTCTATGGGTCAAAATGGCCCCAAATGTTTC‑ATTTTTTGGGGGAAAACtgtg                                                                                                            <  2:1445804/149‑1 (MQ=255)
                                    aaaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACtgtg                                                                                                            <  1:869520/149‑1 (MQ=255)
                                     aaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGc                                                                                                           >  1:291404/1‑149 (MQ=255)
                                          caccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAgtgt                                                                                                      <  2:507365/149‑1 (MQ=255)
                                           cccTCATGCAATATAAACATCTAGAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                     <  1:926666/148‑1 (MQ=255)
                                            ccTCATGCAATATAAACATCTATAAATAAAGATAACAATATAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTg                                                                                                    <  2:955953/149‑1 (MQ=255)
                                             cTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTgg                                                                                                   <  2:72426/149‑1 (MQ=255)
                                               cATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCACCAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCa                                                                                                 <  2:1666882/149‑1 (MQ=255)
                                                  gCAATATAAACATCTATAAATAAAGATAACCAGGTAGTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTc                                                                                              >  1:498321/1‑149 (MQ=255)
                                                  gCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTCGCAGTc                                                                                              >  2:1428862/1‑149 (MQ=255)
                                                         aaaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCg                                                                                       >  1:922433/1‑149 (MQ=255)
                                                          aaCATCTATAAATAAAGATAACAATAGAATGTTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTA‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGt                                                                                      >  1:1591590/1‑149 (MQ=255)
                                                          aaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAAATGTGAGAGGGTGGCAGTCAAACTCGt                                                                                      >  2:1431690/1‑149 (MQ=255)
                                                           aCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGtt                                                                                     >  2:1280963/1‑149 (MQ=255)
                                                           aCAACTATAAAAAAAGAAAACAATAAAATAATAACCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATCTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGtt                                                                                     <  2:899784/149‑1 (MQ=255)
                                                             aTCTATAAATACAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTa                                                                                   <  1:790753/149‑1 (MQ=255)
                                                             aTCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCGGTCAAACTCGTTTa                                                                                   >  1:716680/1‑149 (MQ=255)
                                                                  taaataaaGATAACAATAGAATATTAAGCCAACAAATAACCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa                                                                              <  1:1119819/149‑1 (MQ=255)
                                                                  taaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa                                                                              <  1:777889/149‑1 (MQ=255)
                                                                   aaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac                                                                             <  1:763665/149‑1 (MQ=255)
                                                                    aataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaaca                                                                            >  1:1353815/1‑149 (MQ=255)
                                                                     ataaaGATAACAATAGAATATTAGGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTGGGGGGAAAACTGTGCAGTGTTGGCAGTCAGACTCGTTTacaaaacaa                                                                           >  1:1076905/1‑149 (MQ=255)
                                                                      taaaGATAACAATAGAATATTAAGCCAACAAATAACCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa                                                                          <  1:224887/149‑1 (MQ=255)
                                                                       aaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAg                                                                         <  1:1957316/149‑1 (MQ=255)
                                                                        aaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgt                                                                        <  2:681967/149‑1 (MQ=255)
                                                                              aCAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAACCTCGTTTACAAAACAAAGTGTACAg                                                                  >  2:740507/1‑149 (MQ=255)
                                                                               cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAATTGTACAGa                                                                 >  1:1276446/1‑149 (MQ=255)
                                                                               cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGa                                                                 >  2:1052101/1‑149 (MQ=255)
                                                                                aatagaatagTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAACCTGGCCCCGCCCGTCGCAATCCGTT‑TGTGAAAATTGAACCTTGTTGGCAGTCAAACCCGATCACCATACAAAGTGTACAGaa                                                                <  2:1956996/149‑1 (MQ=255)
                                                                                aaTAGAATATTAAGCTAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑AGCTCTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa                                                                <  1:1698854/149‑1 (MQ=255)
                                                                                aaTAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGaa                                                                >  1:1153935/1‑149 (MQ=255)
                                                                                  tAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGTCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACg                                                              >  1:1865847/1‑149 (MQ=255)
                                                                                    gAATATTAAGCCAACAAATAAACTGAAAACGTTTGTCCGCGATGCTTTCCTCTATGAGTCATAATGGACCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCTAACTCGTCTACAAAACAATGTGTACAGAACGAc                                                            >  1:1248499/1‑149 (MQ=255)
                                                                                    gAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTACAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGAc                                                            >  2:1247819/1‑149 (MQ=255)
                                                                                        atTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTATCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGcc                                                        >  2:1353327/1‑149 (MQ=255)
                                                                                         ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGccc                                                       >  1:43780/1‑149 (MQ=255)
                                                                                         ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGccc                                                       <  2:1971558/149‑1 (MQ=255)
                                                                                          tAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCa                                                      >  1:314982/1‑149 (MQ=255)
                                                                                             gCCAACAAATAAACTGAAAAAGGTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGt                                                   <  2:1143220/149‑1 (MQ=255)
                                                                                                 acaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAt                                               <  1:1163267/149‑1 (MQ=255)
                                                                                                 acaaATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAt                                               <  2:1677399/149‑1 (MQ=255)
                                                                                                   aaaTACACTGAAAAAGTTTGTCCGCGATGCTTTCATCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGAttt                                             <  1:935861/149‑1 (MQ=255)
                                                                                                     aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg                                           >  1:581595/1‑149 (MQ=255)
                                                                                                           tGACAAAGTTTGTCCACGATGGTTTTCTCTATGAGTCAACCTGCACTCGTGGCATTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAg                                     <  1:973814/149‑1 (MQ=255)
                                                                                                           tGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAg                                     <  1:1775570/149‑1 (MQ=255)
                                                                                                             aaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGACAATATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt                                   >  1:1304666/1‑149 (MQ=255)
                                                                                                               aaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt                                 <  2:1753939/149‑1 (MQ=255)
                                                                                                               aaaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt                                 <  2:1368665/149‑1 (MQ=255)
                                                                                                                aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttttt                                <  1:418479/149‑1 (MQ=255)
                                                                                                                aaGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCACAATAGTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttttt                                <  1:1173550/149‑1 (MQ=255)
                                                                                                                aaGTTTGGCCGCGATGCTTTCCTCGAGGAGGCAAAATGTCCCTAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGttttt                                <  2:1109576/149‑1 (MQ=255)
                                                                                                                 aGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                               <  2:1749864/149‑1 (MQ=255)
                                                                                                                        cctcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaagga                        <  2:711583/146‑1 (MQ=255)
                                                                                                                        ccGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaagga                        <  1:868053/149‑1 (MQ=255)
                                                                                                                         cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa                       <  2:497427/149‑1 (MQ=255)
                                                                                                                         cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa                       >  2:1567514/1‑149 (MQ=255)
                                                                                                                          gcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa                      <  2:1153935/149‑1 (MQ=255)
                                                                                                                          accgtGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa                      <  2:803351/145‑1 (MQ=255)
                                                                                                                            gATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc                    <  1:1341670/149‑1 (MQ=255)
                                                                                                                            gATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGGTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagc                    <  1:986562/149‑1 (MQ=255)
                                                                                                                                cTTTCCTCGATGAGTCAAAGTGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAgcagca                <  1:1431690/149‑1 (MQ=255)
                                                                                                                                  ttCCTCTATGAGTCAAAATGGCCCCAAATGTTTA‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGGCGATTTAGAAATAGTTTTATGAAAGGAAAGCAGCATg              >  1:1310834/1‑149 (MQ=255)
                                                                                                                                   tCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTATAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGa             <  1:240890/149‑1 (MQ=255)
                                                                                                                                     ctctAGGAGTTAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaa           <  2:774312/149‑1 (MQ=255)
                                                                                                                                       ctATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAt         <  1:1737812/149‑1 (MQ=255)
                                                                                                                                        tATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt        >  1:413830/1‑149 (MQ=255)
                                                                                                                                         aTGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTa       <  2:716680/149‑1 (MQ=255)
                                                                                                                                         aTGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTa       >  1:1083036/1‑149 (MQ=255)
                                                                                                                                           gAGTCAAAATGGCCCCCAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGGCGATTTAGAAATAGTTTTTTGAACGAAAAGCAGCAGGAAAATTaaa     >  1:971520/1‑149 (MQ=255)
                                                                                                                                             gTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTACAGTGTAGGAAGTCAAAAAAGATTCACAAGCAATGTATGCAGAACAAATGTTAATTTCGATTGACAAATTGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaaa   >  2:488134/1‑148 (MQ=255)
                                                                                                                                              tCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGGAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAct  >  2:8677/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
TCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTC‑ATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACT  >  NC_000913/4542840‑4543130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.