| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | 100% | [crl] | [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908–258676 | 258683 | 8–776 | 82 [0] | [0] 83 | [crl] | [crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 69 (1.000) | 43/260 | NT | 100% | intergenic (+8/‑769) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers | |||||
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTC > NC_000913/258539‑258832 | ttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg < 1:920316‑M2/4‑1 (MQ=255)ttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaagggaaggg > 1:543397‑M2/146‑147 (MQ=255)ttgtgttaaaaatttgctaaagtttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg < 1:129178‑M2/4‑1 (MQ=255) tgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaa > 2:495126‑M2/143‑149 (MQ=255) gttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaaa < 1:324156‑M2/8‑1 (MQ=255) gctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt < 1:703377‑M2/19‑1 (MQ=255) gctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgataatgcgtgaaggtaAGTGCAAAGATAATCGAtt < 1:1284829‑M2/19‑1 (MQ=255) gcgtaattttgccaatttggtaaagcagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaacaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt < 2:253764‑M2/19‑1 (MQ=255) gcaaaattttcccaaattgggaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt < 1:1081858‑M2/19‑1 (MQ=255) taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt > 1:456116‑M2/129‑149 (MQ=255) taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt > 1:1241195‑M2/129‑149 (MQ=255) aaattttgccaatttggtaaaacagatgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtaaattcgtgaaggtaAGTGCAAAGATAATCGATTCtt > 2:94960‑M2/128‑149 (MQ=255) attttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCtttt < 2:819565‑M2/24‑1 (MQ=255) tactctcattgggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc < 2:268064‑M2/26‑1 (MQ=255) ggcaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAt < 2:238441‑M2/29‑1 (MQ=255) gcgaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAt < 1:371381‑M2/29‑1 (MQ=255) ccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggccacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgggaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt > 2:1081075‑M2/120‑149 (MQ=255) caatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTg > 1:537478‑M2/119‑149 (MQ=255) aatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacgcgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaagggaAGTGCAAAGATAATCGATTCTTTTTCGATTGt > 1:863144‑M2/118‑149 (MQ=255) tttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATGCTTTTTCGATTGT‑Ct > 2:203887‑M2/116‑149 (MQ=255) tggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTgg < 1:1049726‑M2/36‑1 (MQ=255) tggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgaggggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTgg < 1:405098‑M2/36‑1 (MQ=255) gggtaaaaccgtggcaccacaacaggagatagcaaggacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTgg < 1:85161‑M2/36‑1 (MQ=255) gtaaaacagttccatcacaacaggagacagcaatgacgttaccgagtggacacccgaagagaaaaaaaaaaaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCt < 2:828452‑M2/38‑1 (MQ=255) gcaaaccagttgcacaccaaaaggaaataacaaggacgtgaccgagtggacacccgaagagcagattgatcaaaaaacttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCt < 2:576510‑M2/38‑1 (MQ=255) aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgaccaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGCTTGT‑CTGGCGGTa > 2:26685‑M2/109‑149 (MQ=255) gttgcatcacaacaggagacagcaatgacgtgaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGCGCTAAAAGTCCCAATGCTTTTTCGATTGT‑CTGGCTGTATGCGt < 1:314298‑M2/46‑1 (MQ=255) atcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACg < 1:122758‑M2/51‑1 (MQ=255) aacaaaacatgaaatagcaattacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACg < 2:1025434‑M2/51‑1 (MQ=255) cacaacaggagataggaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAACATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTg < 2:313602‑M2/53‑1 (MQ=255) acaccaggagataggaatgacgttaccgtgtggacacccgaagagcagatggatctgaacatttaccgtactaggcccgtatactcgtgcagctaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGa < 1:891815‑M2/54‑1 (MQ=255) acaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAAc > 2:513354‑M2/93‑149 (MQ=255) acaggagatagcaatgacgttaccgaggggacacccgaagagcagattgagcaaaaaatttaccgcactaggcccgtatattcgtgaagggaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAAc > 2:1140032‑M2/93‑149 (MQ=255) gagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtagattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGc > 2:1285755‑M2/89‑149 (MQ=255) gcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGa > 2:1295575‑M2/83‑149 (MQ=255) gcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTACAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGa > 2:941695‑M2/83‑149 (MQ=255) cgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt < 2:375865‑M2/74‑1 (MQ=255) cgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt < 2:1143302‑M2/74‑1 (MQ=255) gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGGGTg > 2:171103‑M2/75‑149 (MQ=255) gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTAGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTgcggg > 2:888382‑M2/75‑147 (MQ=255) ttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgccctagccccgtatatccgtcaacctaAGCTCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCAACGGAAGGGCGtgg > 1:696287‑M2/74‑148 (MQ=255) ttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGa > 1:372692‑M2/74‑149 (MQ=255) ttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGa > 2:507852‑M2/74‑149 (MQ=255) gagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGACACCGGCCCCGGAAGTGCGTAAGTTCt > 1:705425‑M2/69‑149 (MQ=255) tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAGTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAGTCgggg > 2:568153‑M2/66‑149 (MQ=255) gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGc > 2:194110‑M2/64‑149 (MQ=255) ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtg > 1:164900‑M2/59‑149 (MQ=255) cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg > 1:1185767‑M2/58‑149 (MQ=255) gcagtttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAg < 1:254151‑M2/98‑1 (MQ=255) cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGc > 1:1129158‑M2/51‑149 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAACCCGGCACCGGCAGTGCGTGAATCCTGGGGCGGGAGGATGGagcaggcaga > 2:715698‑M2/44‑148 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGCAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgc > 1:466057‑M2/44‑149 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAGTTCTGGGGCTGGTGGATGGAGCTGGAAgc > 1:506893‑M2/44‑149 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCGGGAAgc > 1:1063878‑M2/44‑149 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCGGGAAgc > 1:32221‑M2/44‑149 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaggcgga > 2:1098497‑M2/41‑147 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAagcgcc > 2:485738‑M2/41‑148 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa > 1:504659‑M2/41‑149 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa > 2:838279‑M2/41‑149 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCGGGAAGCGCa > 1:1279923‑M2/41‑149 (MQ=255) aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAg > 1:555445‑M2/40‑149 (MQ=255) tttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATc < 2:614679‑M2/115‑1 (MQ=255) cagcactggggccgtatattggtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGGAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGt < 2:325824‑M2/119‑1 (MQ=255) cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGGTTGT‑CGGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtt > 2:1245267‑M2/30‑149 (MQ=255) cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGACTGTAATGAGTG‑ATGCGTCACCAGCAAACCGGCACCGGACGTGCGTGAAAGCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtt > 1:628429‑M2/30‑149 (MQ=255) ctaggcccggatattcatggaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc < 2:869960‑M2/124‑1 (MQ=255) tgggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAcc < 2:89055‑M2/125‑1 (MQ=255) ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAAgcccgttttccgtc > 1:293503‑M2/23‑144 (MQ=255) ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTa > 1:668727‑M2/23‑149 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa < 2:456116‑M2/133‑1 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTAAAAGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa > 2:210840‑M2/17‑149 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATAGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTAAAAGTGAAACAGGCACAGGAAGTGCGCGAATTCTGAGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAgttc > 2:566853‑M2/17‑148 (MQ=255) gtgaaggtaAGTGCAAAGCTAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGttt < 1:1149229‑M2/140‑1 (MQ=255) tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg < 2:1094258‑M2/141‑1 (MQ=255) tacaggtaAGGGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg < 1:192909‑M2/141‑1 (MQ=255) gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTgg < 1:1168141‑M2/142‑1 (MQ=255) aaggtaAGGGCAAAGATCATCGATTCTTTTTCGATTGC‑CTGGCTGTAGGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGt < 1:234709‑M2/143‑1 (MQ=255) ggtaAGTTCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCt < 2:910879‑M2/145‑1 (MQ=255) gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTg > 1:203383‑M2/4‑149 (MQ=255) taAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGt > 1:763603‑M2/3‑149 (MQ=255) taAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAACGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGt > 2:510735‑M2/3‑149 (MQ=255) aAGTGCAAAGTGAATCGATTCTGTTTCGATTGT‑CTGGCTGTATGCGTCAACCTGAAACCTGCACCGGAGGTGCGTTAAGTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGtt < 2:1108922‑M2/148‑1 (MQ=255) aGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTc < 1:495126/149‑1 (MQ=255) | GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT‑CTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTC > NC_000913/258539‑258832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |