New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4633255	NA (NA)	3 (0.080)	3/266	NT	6.7%	coding (492/513 nt)	yjjX	non‑canonical purine NTP phosphatase, ITPase/XTPase
	?	NC_000913	= 4633304	42 (1.070)					coding (443/513 nt)	yjjX	non‑canonical purine NTP phosphatase, ITPase/XTPase

CTTATCCGTCCTACAAATACCCGTAATTTCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAA  >  NC_000913/4633156‑4633447                                                                                                                                                     |                                                                                                                                                 cTTATCCGTCCTACAAATACCCGTAATTTCAATATGTTTGCTAGGGATGATCAGACGCGGTAGCGTCGCATCAGGCGCTTAATTCACGGCATTATGAAACGGCCTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCgagtga                                                                                                                                                  <  2:257273/149‑1 (MQ=255)           ctccAAATACCCGTAATTTCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGTAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCcggc                                                                                                                                        <  1:492030/146‑1 (MQ=255)            tACAAATACCCGTAATTTCAATATGTTTGGTAGGCATGATAAGATGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGGGAGTTTCCcggcg                                                                                                                                       >  1:609958/1‑149 (MQ=255)             aCAAATACCCGTAATTTCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCcggcgg                                                                                                                                      >  2:667051/1‑149 (MQ=255)                 agaCCCGGAATTTCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTaaa                                                                                                                                  <  2:610636/147‑1 (MQ=255)                   atccGTAATTTCAATATGTTTGGTAGGCAGGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGGTTCCCGGCGGTAAaca                                                                                                                                <  2:557325/147‑1 (MQ=255)                       gTAATTTCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGAACACCGCCTGGCGATAGACGCTGCCGCGAGTGAGGTTCCCGCCGGGACACACGcc                                                                                                                            >  2:139332/1‑149 (MQ=255)                       gTAATTTCAATATGTCTGGTCGGCATGGTAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGcc                                                                                                                            <  1:494238/149‑1 (MQ=255)                         gattttgatatGTTTGGGAGGCATGATAAGACGCGGCAGCGGCGCATCAGGCGCTTAATACACGGCATGATGAATCGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCTAGTGAGTTTCCCGGTGGCAAACACGCCGa                                                                                                                          <  2:561427/142‑1 (MQ=255)                           tttCAATATGTTTGGTAGGCATGATAAGGCGCGGCCGCGTCGAATACGGCGCTAAAAAAACAACCTTATGGACCGGGCTCATCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATc                                                                                                                        <  1:575153/149‑1 (MQ=255)                           tttCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATTACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATc                                                                                                                        <  1:527008/149‑1 (MQ=255)                           tttCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGGGAGTTTCCCGGCGGTAAACACGCCGATc                                                                                                                        >  1:697752/1‑149 (MQ=255)                             tCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGc                                                                                                                      <  2:399300/149‑1 (MQ=255)                                    gTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAATGAGTTTCCCGGCCGTAACCACGCCCATCGCCccctc‑c                                                                                                              >  2:469408/1‑149 (MQ=255)                                        ggTAGGCGTGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTAc                                                                                                          <  2:386505/149‑1 (MQ=255)                                        ggTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTAc                                                                                                          <  1:262055/149‑1 (MQ=255)                                         gcaGGCATGATAAGACGCGGCAGCCTCGCATCAGGCTCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACg                                                                                                         <  1:698053/147‑1 (MQ=255)                                          tAGGCATGATAAGGCGCGGCAGGGTCGCATCAGGCGCTTAATACACGGCCTTATGAAACGGAGTCAGCGCCAGGATCACCGCCTGGGGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGa                                                                                                        <  1:121589/149‑1 (MQ=255)                                          tAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGa                                                                                                        <  2:563233/149‑1 (MQ=255)                                             gCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGGCTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCCCGAGTGGGTTTCCCGGCGGTAAAAACGCCGATCGCCCCCTC‑CCTACGAccc                                                                                                     >  2:342228/1‑148 (MQ=255)                                             gCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCa                                                                                                     >  1:411483/1‑149 (MQ=255)                                               aTGATCAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAAt                                                                                                   <  1:531776/149‑1 (MQ=255)                                                  aTAAGACGCGGCAGCGTCGAATAAGGCACTTAATCCCCGGCATTATGAAACGGACACAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTGCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAAtctc                                                                                                <  2:247620/149‑1 (MQ=255)                                                     aGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGCCCAACCacatc                                                                                             >  2:58968/1‑149 (MQ=255)                                                            gCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCg                                                                                      <  2:19295/149‑1 (MQ=255)                                                                 gTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGtata                                                                                 <  2:531206/149‑1 (MQ=255)                                                                    ccactgggCGCGTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAAcg                                                                              <  2:332351/143‑1 (MQ=255)                                                                     cATCAGGCGCTTAATACACGGCAGTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAAcgc                                                                             <  2:531422/149‑1 (MQ=255)                                                                               ctAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACgg                                                                   <  2:338508/148‑1 (MQ=255)                                                                                 aaTACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGAACTGTCTTATCAATACCGGTATAACGCGACATCACGGGa                                                                 <  2:703754/149‑1 (MQ=255)                                                                                      acGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATCACGCGACATCACGGGACCAAg                                                            >  2:601577/1‑149 (MQ=255)                                                                                        ggCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCAGCAATACCGGTATAACGCGACATCCCGGGACCAAggg                                                          >  1:346242/1‑147 (MQ=255)                                                                                         gCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAgtttcataatgccgtgtattaagcgcctgatgcgacgctgccgcgtcttatcatgcctaccaaacatattgaaattacgggtatttgt                                                          <  2:13534‑M2/149‑89 (MQ=255)                                                                                           aTTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAgtttcataatgccgtgtattaagcgcctgatgcgacgctgccgcgtcttatcatgcctaccaaacatattgaaattacgggtatttgtag                                                        <  1:149268‑M2/149‑91 (MQ=255)                                                                                              aTGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCAc                                                    <  1:58791/149‑1 (MQ=255)                                                                                               tGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGGGTTTCCCGGCGGGAAACACGCCGACCGACCCTTC‑CGACCGACCAAGCGCATCAATACAGGGATAACGCGGCATCAGGTGGCCAAGCGCCTcccc                                                   >  2:97685/1‑149 (MQ=255)                                                                                                         tCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACAACACGGGACCAAGCGCCCCACCTTAACCCACt                                         >  2:70230/1‑149 (MQ=255)                                                                                                         tCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCCGTATACCGCGACATCACGGGACCCAGCGCCCCACCTTCCCGCCCt                                         >  2:677860/1‑149 (MQ=255)                                                                                                           aGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGCTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGGGACATCCAGGGAGCAAGCGCCTCACCTTCAGGCACttt                                       >  1:562874/1‑149 (MQ=255)                                                                                                             cgcAAGGATACCCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGTTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACttttt                                     <  2:348503/149‑1 (MQ=255)                                                                                                                           ccTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCa                       <  2:148037/149‑1 (MQ=255)                                                                                                                              ggTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCAGATCGCCCCTTC‑CGTACGACCAATCGCATCCATGCCGGTATAACGCGACATCACAGCCCCAAGCGCCACACCTTCACGCACTCTTTCCCGCATcccccacggc                    >  1:565582/1‑143 (MQ=255)                                                                                                                                       cGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCaaa           <  1:235338/149‑1 (MQ=255)                                                                                                                                       cGCTGGCGCGAGTGAGTTGCCCGGCGGTAAACACGCCG‑TTGCTCCTCCGCTCACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCaaa           <  1:498464/149‑1 (MQ=255)                                                                                                                                             cgcgAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCCGGCAACGGCAAAGTAGcc     >  2:636264/1‑149 (MQ=255)                                                                                                                                              gcgAGTGAgtttcataatgccgtgtattaagcgcctgatgcgacgctgccgcgtcttatcatgcctaccaaacatattgaaattacgggtatttgtaggacggataaggcgttcacgccgcatccggcattcggtgcacgatgcctgat     >  1:13534‑M2/1‑8 (MQ=255)                                                                                                                                                gagtgagtTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGaa  >  1:207022/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CTTATCCGTCCTACAAATACCCGTAATTTCAATATGTTTGGTAGGCATGATAAGACGCGGCAGCGTCGCATCAGGCGCTTAATACACGGCATTATGAAACGGACTCAGCGCCAGGATCACCGCCTGGTGATAGACGCTGGCGCGAGTGAGTTTCCCGGCGGTAAACACGCCGATCGCCCCTTC‑CTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAA  >  NC_000913/4633156‑4633447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.