| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,970,813 | Δ1 bp | 5.4% | coding (681/1131 nt) | wecB → | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,970,813 | 0 | C | . | 5.4% | 538.2 / 23.0 | 149 | coding (681/1131 nt) | wecB | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| Reads supporting (aligned to +/- strand): ref base C (73/68); new base . (4/4); total (77/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
ACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTT > NC_000913/3970677‑3970960 | aCCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCA‑GCGCGTGGCAGat < 3:869263/149‑2 (MQ=255)aCCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCA‑GCGCGTGGCAGat < 3:1252275/149‑2 (MQ=255) aGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATc > 2:166655/1‑149 (MQ=255) tgatgaGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGcc < 1:166655/149‑1 (MQ=255) gcagcGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACg > 2:1060833/1‑149 (MQ=255) gAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGt > 4:167877/1‑149 (MQ=255) gAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGt > 3:476334/1‑149 (MQ=255) aaCTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTc < 3:590486/149‑1 (MQ=255) ggcAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAgg < 1:383584/128‑1 (MQ=255) ggcAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCgg < 1:222043/149‑1 (MQ=255) gcAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGt > 2:722898/1‑149 (MQ=255) ttACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCATGCACCAGGACATCCAGATTGTCt > 4:952150/1‑137 (MQ=255) ttACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATc < 3:410492/140‑1 (MQ=255) ttACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATc > 4:410492/1‑140 (MQ=255) ttACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑AGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCt < 3:952150/137‑1 (MQ=255) ccGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCa < 3:925088/143‑1 (MQ=255) ccGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCa > 4:925088/1‑143 (MQ=255) ccGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCaa > 4:1320621/1‑149 (MQ=255) ccGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCaa > 3:628071/1‑149 (MQ=255) ccGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCA‑GCGCGTGGCAGat > 2:338360/1‑98 (MQ=255) cGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAAc < 1:1060833/149‑1 (MQ=255) gTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAAcc > 2:237246/1‑149 (MQ=255) tCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAAc < 3:167877/149‑1 (MQ=255) cGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACg > 1:457215/1‑149 (MQ=255) ccGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCaga < 3:167801/149‑1 (MQ=255) aTAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGaa < 4:628071/149‑1 (MQ=255) tAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAg < 4:48591/80‑1 (MQ=255) tAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAg > 3:48591/1‑80 (MQ=255) aaaGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGAt < 1:968729/108‑1 (MQ=255) aaaGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGAt > 4:1057881/1‑108 (MQ=255) aaaGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGAt > 2:968729/1‑108 (MQ=255) aaGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGt > 4:821680/1‑149 (MQ=255) aaGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGt > 2:1128957/1‑149 (MQ=255) aGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGaa > 1:1016966/1‑133 (MQ=255) aGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGaa < 2:1016966/133‑1 (MQ=255) aGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGaa > 1:297235/1‑133 (MQ=255) gatgatTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGccac > 4:405729/1‑84 (MQ=255) gatgatTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGccac > 2:1016813/1‑84 (MQ=255) gatgatTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGccac < 1:1016813/84‑1 (MQ=255) gatgatTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCa < 1:63792/149‑1 (MQ=255) gatgatTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCa > 2:484074/1‑149 (MQ=255) gatgatTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCa > 4:931032/1‑149 (MQ=255) ttCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATcc < 1:316097/96‑1 (MQ=255) ttCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATcc > 2:316097/1‑96 (MQ=255) ttCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGc > 2:1147476/1‑149 (MQ=255) tGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCg < 2:98178/107‑1 (MQ=255) tGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCg > 1:98178/1‑107 (MQ=255) tGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAAc < 4:483353/135‑1 (MQ=255) gTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGt < 3:1143114/107‑1 (MQ=255) gACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGa < 2:1073289/92‑1 (MQ=255) gACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGa > 1:1073289/1‑92 (MQ=255) aCCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTg < 3:945914/147‑1 (MQ=255) gTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATc < 4:52449/135‑1 (MQ=255) gTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCAt < 1:1128957/149‑1 (MQ=255) gTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCAt < 3:821680/149‑1 (MQ=255) acaGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCaga > 3:460478/1‑119 (MQ=255) acaGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCaga > 1:811837/1‑119 (MQ=255) acaGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCaga < 4:460478/119‑1 (MQ=255) acaGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCaga < 2:811837/119‑1 (MQ=255) aGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAAc > 4:545729/1‑121 (MQ=255) gCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGaaaa > 4:535870/1‑149 (MQ=255) cGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGaaaaa < 1:237246/149‑1 (MQ=255) gTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGTTTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAAt > 3:812338/1‑149 (MQ=255) gTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAAt > 3:1005151/1‑149 (MQ=255) tGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCa < 4:1382409/128‑1 (MQ=255) tGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCa > 3:1382409/1‑128 (MQ=255) tGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAAt > 1:186002/1‑148 (MQ=255) tGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATg > 1:707324/1‑149 (MQ=255) agagTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGc < 3:1006984/90‑1 (MQ=255) agagTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGc > 4:1006984/1‑90 (MQ=255) agagTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGc > 4:1247923/1‑90 (MQ=255) agagTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTc > 1:487380/1‑149 (MQ=255) gagTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCa < 2:457215/149‑1 (MQ=255) tttCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATc < 4:430316/119‑1 (MQ=255) tttCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTc > 3:1405399/1‑149 (MQ=255) cGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTga < 1:1147476/149‑1 (MQ=255) ggTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTgat < 4:812338/149‑1 (MQ=255) gTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTgatc < 3:535870/149‑1 (MQ=255) gTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCAtc < 3:583779/81‑1 (MQ=255) gTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCAtc > 4:583779/1‑81 (MQ=255) tGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGt < 3:11760/66‑1 (MQ=255) tGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGt > 4:11760/1‑66 (MQ=255) cTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCag > 3:400177/1‑93 (MQ=255) tttGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCAtt > 2:189132/1‑135 (MQ=255) ttGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAg < 3:410638/149‑1 (MQ=255) agaaATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAAc < 1:1164284/92‑1 (MQ=255) agaaATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATc > 4:596812/1‑101 (MQ=255) agaaATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGa > 2:690197/1‑147 (MQ=255) agaaATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGa < 1:690197/147‑1 (MQ=255) tgtCTGCCA‑GCGCGTGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTAtt > 2:1283351/3‑149 (MQ=255) gtCTGCCA‑GCGCGTGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTgg > 1:860025/2‑106 (MQ=255) tCTGCCA‑GCGCGTGGCAGACGTCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTa > 2:796022/1‑149 (MQ=255) tGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAg > 4:227246/1‑138 (MQ=255) tGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAg < 2:1250280/138‑1 (MQ=255) tGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAg > 1:1250280/1‑138 (MQ=255) tGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAg < 3:227246/138‑1 (MQ=255) tGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTAcc < 3:519808/149‑1 (MQ=255) gCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCg > 2:1445599/1‑149 (MQ=255) cACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGtt > 3:615248/1‑149 (MQ=255) aCGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTTAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGttt < 3:541757/149‑1 (MQ=255) | ACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGC‑TGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTT > NC_000913/3970677‑3970960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |