| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,169,260 | Δ1 bp | 6.8% | intergenic (‑29/+24) | ygiV ← / ← ygiW | transcriptional repressor for mcbR biofilm gene/hydrogen peroxide and cadmium resistance periplasmic protein; stress‑induced OB‑fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,169,260 | 0 | A | . | 6.8% | 421.9 / 21.6 | 118 | intergenic (‑29/+24) | ygiV/ygiW | transcriptional repressor for mcbR biofilm gene/hydrogen peroxide and cadmium resistance periplasmic protein; stress‑induced OB‑fold protein |
| Reads supporting (aligned to +/- strand): ref base A (54/56); new base . (4/4); total (58/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.58e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
CACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGTTTGTGG > NC_000913/3169113‑3169407 | cacaTGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGaa < 2:163600/149‑1 (MQ=255)cacaTGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGaa < 3:1290043/149‑1 (MQ=255) tGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGaa < 1:300778/145‑1 (MQ=255) aTAAATTGCGCCCCGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGAGAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑Tc > 4:1239942/1‑149 (MQ=255) aTTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCgg < 4:529597/149‑1 (MQ=255) tttCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCggg > 2:354787/1‑149 (MQ=255) ccACGCTGTATTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCgg > 3:89048/1‑149 (MQ=255) ccACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCgg > 2:952784/1‑149 (MQ=255) aCGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTa < 4:723477/149‑1 (MQ=255) gCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAAc < 1:1057548/149‑1 (MQ=255) gTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCgg > 3:875061/1‑133 (MQ=255) gAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGa < 4:871469/149‑1 (MQ=255) gAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGa > 3:871469/1‑149 (MQ=255) aGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGAt > 3:860856/1‑149 (MQ=255) gCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGaa > 1:755301/1‑118 (MQ=255) gCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGaa < 2:755301/118‑1 (MQ=255) cAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGAttt > 1:1269275/1‑149 (MQ=255) aTTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGGAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTAc < 3:1239942/149‑1 (MQ=255) ttCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACt > 3:500400/1‑149 (MQ=255) aGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTg > 2:1055601/1‑149 (MQ=255) aGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTg > 3:429789/1‑149 (MQ=255) aGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGG‑ACGCGTTCCCgg > 4:75539/1‑121 (MQ=255) aGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGG‑ACGCG‑TTCCcgg < 3:75539/121‑1 (MQ=255) tACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGAt > 2:93924/1‑149 (MQ=255) gCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTg < 3:674380/140‑1 (MQ=255) gCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTg > 4:674380/1‑140 (MQ=255) cGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGtt < 4:1079553/149‑1 (MQ=255) ggTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGttt < 2:1269275/149‑1 (MQ=255) ggTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGttt < 1:509598/149‑1 (MQ=255) cGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTGCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACg > 4:433580/1‑149 (MQ=255) ggCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGt < 3:433580/149‑1 (MQ=255) aaCATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCaa < 1:952784/149‑1 (MQ=255) aaCATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCaa < 4:89048/149‑1 (MQ=255) aTCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTAc < 2:627309/115‑1 (MQ=255) aTCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTAc > 1:627309/1‑115 (MQ=255) aTCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGc > 3:167724/1‑128 (MQ=255) aTCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGc < 4:167724/128‑1 (MQ=255) aTCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGAc < 4:723206/141‑1 (MQ=255) aTCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGAc > 3:723206/1‑141 (MQ=255) tCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGt < 2:637357/135‑1 (MQ=255) tCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGt > 1:637357/1‑135 (MQ=255) cGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCg > 2:269262/1‑127 (MQ=255) cGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCg < 1:269262/127‑1 (MQ=255) gCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCaa < 1:93924/149‑1 (MQ=255) gCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCaa < 4:429789/149‑1 (MQ=255) gCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCAGATCTGTTTGACGTCAATTTCaa < 4:500400/149‑1 (MQ=255) aGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGaa > 1:60646/1‑149 (MQ=255) tATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGG‑ACGCGTTCCCGGGaa > 2:228572/1‑90 (MQ=255) ttGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCa < 3:1276610/149‑1 (MQ=255) ttGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCa < 4:860856/149‑1 (MQ=255) ttGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCa < 1:354787/149‑1 (MQ=255) aaTCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATc < 3:201607/149‑1 (MQ=255) aTCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCttt < 4:1391562/145‑1 (MQ=255) aTCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCttt > 3:1391562/1‑145 (MQ=255) aTCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCg > 3:95733/1‑149 (MQ=255) aTCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCg > 2:459272/1‑149 (MQ=255) tCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCg < 4:880607/148‑1 (MQ=255) tCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCg > 3:880607/1‑148 (MQ=255) cGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGAc < 1:1055601/149‑1 (MQ=255) cGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGAc < 2:60646/149‑1 (MQ=255) gATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCaa < 4:631488/120‑1 (MQ=255) tCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGttt < 2:1187923/99‑1 (MQ=255) cAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGa < 4:1214686/77‑1 (MQ=255) cAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGa > 3:1214686/1‑77 (MQ=255) cAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATc < 1:1091212/92‑1 (MQ=255) cAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATc > 2:1091212/1‑92 (MQ=255) aGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACt < 4:927450/82‑1 (MQ=255) aGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACt > 3:927450/1‑82 (MQ=255) tCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTAc > 3:1356982/1‑69 (MQ=255) tCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTAc < 4:1356982/69‑1 (MQ=255) tCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGt > 3:848218/1‑118 (MQ=255) tCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGt < 4:848218/118‑1 (MQ=255) gTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCgg < 4:228025/55‑1 (MQ=255) gTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCgg > 3:228025/1‑55 (MQ=255) gTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCt > 3:274737/1‑149 (MQ=255) gTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGAc < 4:108360/87‑1 (MQ=255) gTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGAc > 3:108360/1‑87 (MQ=255) tCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAAc > 2:661749/1‑137 (MQ=255) tCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAAc < 1:661749/137‑1 (MQ=255) ttttGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTAt < 2:114537/112‑1 (MQ=255) ttttGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTAt > 1:114537/1‑112 (MQ=255) gCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCa < 3:644097/100‑1 (MQ=255) ccTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCaa < 4:1387982/85‑1 (MQ=255) ccTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCaa > 3:1387982/1‑85 (MQ=255) gCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGttt < 2:1417593/68‑1 (MQ=255) gCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGttt > 1:1417593/1‑68 (MQ=255) ttCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGttt > 3:491434/1‑59 (MQ=255) ttCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAAtc > 3:233385/1‑108 (MQ=255) ttCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAAtc < 4:233385/108‑1 (MQ=255) tCCCGGG‑ACGCGTTCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCaa < 2:376093/72‑1 (MQ=38) tCCCGGG‑ACGCGTTCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCaa > 1:376093/1‑72 (MQ=38) tCCCGGG‑ACGCGTTCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCa > 1:1323177/1‑82 (MQ=255) cccGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGtt > 4:501589/1‑149 (MQ=255) ccGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGc < 4:880308/123‑1 (MQ=255) ccGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGc > 1:506644/1‑123 (MQ=255) ccGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGc < 2:506644/123‑1 (MQ=255) ccGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGttt > 1:1461128/1‑149 (MQ=255) ccGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGttt > 1:436826/1‑149 (MQ=255) gggAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGTTtgt < 1:459272/149‑1 (MQ=255) gAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGTTTGTgg > 4:851195/1‑149 (MQ=255) | CACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCACAGGTATTGATGGGAAATCGATAATGTTTACATCCAGTGTCAGGTTTGTCATTTTGCCTCCCTGCGAAATTATTCCCGGGAACGCG‑TCCCGGGAGCGGTAACAATTACGGATTTACTTTGCGGATCTGTTTGACGTCAATTTCAACAGAATTCCAGTCTTTATCGACTTCACCCTGAATCTCAACCGTATCTTTCGGCGTCACCGTCACGCCGTTCCAGCGTTTGTGG > NC_000913/3169113‑3169407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |