| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,736,322 | G→T | 10.2% | intergenic (+165/+31) | xylR → / ← bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,736,322 | 0 | G | T | 10.2% | 753.7 / 52.3 | 224 | intergenic (+165/+31) | xylR/bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Reads supporting (aligned to +/- strand): ref base G (103/98); new base T (11/12); total (114/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 225 total aligned reads displayed.
GGCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTC > NC_000913/3736175‑3736470 | gCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GAc < 4:1061905/149‑1 (MQ=255) gCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GAc < 4:261866/149‑1 (MQ=255) aTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCGTGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcgg < 2:1448730‑M2/149‑7 (MQ=255) aTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcgg > 4:59296‑M2/1‑143 (MQ=255) gTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataag > 2:895156‑M2/1‑138 (MQ=255) aCGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa > 3:260686‑M2/1‑135 (MQ=255) gCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagt > 1:1192797‑M2/1‑133 (MQ=255) gCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagt < 2:1192797‑M2/136‑4 (MQ=255) ttGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa < 1:30144‑M2/134‑11 (MQ=255) gataaggcgttcacGCCGCATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcggataag > 3:745254‑M2/6‑118 (MQ=255) tGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAa < 3:675369‑M2/110‑2 (MQ=255) tGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAa > 4:675369‑M2/1‑109 (MQ=255) gAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAag < 3:754388‑M2/110‑3 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa > 1:5182‑M2/1‑104 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtc > 3:920881‑M2/1‑104 (MQ=255) ccTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa > 2:781660‑M2/1‑103 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GAc > 4:315162/1‑101 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcgg > 4:1016988‑M2/1‑102 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcgg < 3:1016988‑M2/108‑7 (MQ=255) tCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCg > 4:515541/1‑149 (MQ=255) gACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa > 3:868182‑M2/1‑95 (MQ=255) tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCAgtcggataa > 3:1188699‑M2/1‑92 (MQ=255) tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GAc < 2:1359084/90‑1 (MQ=255) tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTa < 4:886136/149‑1 (MQ=255) aCCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtc > 1:143055‑M2/1‑90 (MQ=255) aCCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTAt > 1:1145445/1‑149 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg > 2:101453/1‑131 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg < 1:101453/131‑1 (MQ=255) aTAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa < 1:1213607‑M2/86‑11 (MQ=255) aTAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GAc > 2:1047835/1‑75 (MQ=255) aTAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GAc < 1:1047835/75‑1 (MQ=255) aTAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACAGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa > 2:1213607‑M2/1‑76 (MQ=255) tAAAACGCACCAACAACGCTTCAGGCTCGTACCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggata > 4:921166‑M2/1‑75 (MQ=255) aaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACAtt < 3:806837/142‑1 (MQ=255) aaCGCACCAACAACGCTTCAGGATCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcggataa > 3:500658‑M2/1‑72 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGGCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGAGAAGGCTCAAGGAAATGCaa < 4:153525/94‑1 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcggat > 3:4647‑M2/1‑67 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCaa > 3:153525/1‑94 (MQ=255) aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcg < 4:894481‑M2/69‑6 (MQ=255) gCTTCAGGCTCGTAGCTCAATTGCTTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCTAGGAAATGCAATTACATATGCGTCTCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa < 4:465556/149‑1 (MQ=255) gCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa < 3:1422306/149‑1 (MQ=255) ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑TGTCagtcggataa < 2:379184‑M2/66‑11 (MQ=255) ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCt > 1:699747/1‑118 (MQ=255) cAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAAt > 4:411256/1‑77 (MQ=255) aGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcggataa > 3:1348160‑M2/1‑53 (MQ=255) aGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcggataa < 4:1348160‑M2/63‑11 (MQ=255) tCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGcgccgc > 4:780246/1‑91 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCaa < 2:674290/64‑1 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTa > 3:645598/1‑77 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTa < 4:645598/77‑1 (MQ=255) tAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg < 3:891831/149‑1 (MQ=255) cTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAagtcggataag < 3:771611‑M2/54‑12 (MQ=255) tCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAAc > 1:461853/1‑91 (MQ=255) tCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa > 3:540598/1‑117 (MQ=255) aCTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAtt < 1:103712/85‑1 (MQ=255) aCTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAtt > 2:103712/1‑85 (MQ=255) ccTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGcc > 3:1089230/1‑149 (MQ=255) gagaCAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACa > 1:1310148/1‑64 (MQ=255) gagaCAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACa < 2:1310148/64‑1 (MQ=255) aCAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg > 2:1150615/1‑149 (MQ=255) cAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAActct < 2:1415015/123‑1 (MQ=255) aaaGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGCTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGCAGCCCTTCAGCt > 4:285401/1‑149 (MQ=255) aGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa > 1:1406812/1‑100 (MQ=255) gTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgtca > 4:109974/1‑110 (MQ=255) gTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTta < 3:109974/112‑1 (MQ=255) tAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg < 1:796842/126‑1 (MQ=255) aaaaGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAAc > 3:940142/1‑113 (MQ=255) ccTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTgg > 4:666666/1‑71 (MQ=255) ccTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTgg < 3:666666/71‑1 (MQ=255) cTTATCCGACT‑TGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTg < 1:1327109/86‑1 (MQ=38) cTTATCCGACT‑TGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGATTATCCTGGTACATTg > 2:1327109/1‑86 (MQ=37) cTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgtt < 4:1269219/99‑1 (MQ=255) cTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgtt > 3:1269219/1‑99 (MQ=255) cTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAActct > 2:541786/1‑110 (MQ=255) ttATCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacc < 3:354781‑M2/149‑136 (MQ=255) ttATCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaa < 2:30144‑M2/134‑121 (MQ=255) ttATCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataagg < 4:1441845‑M2/113‑100 (MQ=255) ttATCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaa < 1:379184‑M2/66‑53 (MQ=255) ttATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCTATTaa < 2:416175/62‑1 (MQ=255) ttATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTaa > 1:416175/1‑62 (MQ=255) ttATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgt > 2:308618/1‑100 (MQ=255) ttATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgt > 4:752227/1‑100 (MQ=255) ttATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg < 4:1384548/134‑1 (MQ=255) aTCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatca < 4:80534/143‑1 (MQ=255) tCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacctga < 2:938289‑M2/149‑139 (MQ=255) tCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagttga > 3:305861‑M2/1‑11 (MQ=255) tCCGACT‑GACAagtcggataaggctttttactttgtctcaggcagt < 3:782954‑M2/46‑36 (MQ=255) tCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGc > 2:469579/1‑83 (MQ=255) tCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAg < 4:855705/93‑1 (MQ=255) tCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt > 4:1166897/1‑136 (MQ=255) tCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt < 3:1166897/136‑1 (MQ=255) ccGACT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgtttcatcatgcctggcgggtaggtcggataaggcgttcacgc > 1:173354‑M2/1‑10 (MQ=255) gACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGa > 4:1232046/1‑82 (MQ=255) gACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGc > 1:667130/1‑149 (MQ=255) cT‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacctgatgtga > 1:938289‑M2/1‑6 (MQ=255) t‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa < 1:875688/80‑1 (MQ=255) t‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa > 2:875688/1‑80 (MQ=255) t‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCtt < 4:757930/122‑1 (MQ=255) t‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGt > 3:1408671/1‑149 (MQ=255) gACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGCTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGCAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTc < 3:285401/149‑1 (MQ=255) | GGCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACT‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTC > NC_000913/3736175‑3736470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |