| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 436,702 | G→A | 6.0% | G38G (GGG→GGA) | pgpA → | phosphatidylglycerophosphatase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 436,702 | 0 | G | A | 6.0% | 540.5 / 15.4 | 164 | G38G (GGG→GGA) | pgpA | phosphatidylglycerophosphatase A |
| Reads supporting (aligned to +/- strand): ref base G (75/79); new base A (5/5); total (80/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 172 total aligned reads displayed.
GCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATGGGTGTGCACGATCATG > NC_000913/436559‑436850 | gCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGGAGTGGATTAAGCCCGATCGTTCCTGGGACGAt < 1:684091/149‑1 (MQ=255)gCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAt < 4:1099418/149‑1 (MQ=255) aTTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCa > 2:1008744/1‑149 (MQ=255) aTTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCa > 4:294934/1‑149 (MQ=255) aTTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGAACGAt > 1:78192/1‑136 (MQ=255) aTTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGAACGAt < 2:78192/136‑1 (MQ=255) ttAGACTGGAAAGGATATGACCATTTTGCCCCGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGc < 2:979649/139‑1 (MQ=255) ttAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAG‑AATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGc > 4:78799/1‑149 (MQ=255) gAAAGGTTATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑gg > 2:1039629/1‑129 (MQ=255) gAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAt > 2:249101/1‑127 (MQ=255) gAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAt < 1:249101/127‑1 (MQ=255) gAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCC‑ATCGTCCCAGGAACGAT‑cgggc < 3:17838/131‑3 (MQ=255) gAAAGGATATGACCATTTCGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCg > 3:511394/1‑149 (MQ=255) aaGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑ggg < 1:529578/128‑1 (MQ=255) atatGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTg > 3:765734/1‑148 (MQ=255) atatGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTg < 4:765734/148‑1 (MQ=255) atGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTgg > 2:829840/1‑130 (MQ=255) gACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTg > 2:514407/1‑144 (MQ=255) cATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtga < 2:1349624/149‑1 (MQ=255) cATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtga > 4:1453672/1‑149 (MQ=255) cATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtga < 1:826405/149‑1 (MQ=255) aTTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat < 1:1221798/149‑1 (MQ=255) aTTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat < 4:1322922/149‑1 (MQ=255) aTTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat < 3:1453672/149‑1 (MQ=255) aTTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat > 1:540338/1‑149 (MQ=255) cACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCttt > 3:571073/1‑149 (MQ=255) aCGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCtttt < 3:798551/149‑1 (MQ=255) aCGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCC‑ATCGTCCCAGGAACGAT‑cgggc > 1:499286/1‑107 (MQ=38) aCGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCC‑ATCGTCCCAGGAACGAT‑cgggc < 2:499286/109‑3 (MQ=38) cGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCttttt < 2:540338/149‑1 (MQ=255) cATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGtt < 3:1404989/125‑1 (MQ=255) aTAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGccc < 4:221768/149‑1 (MQ=255) tAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCt < 1:1008744/149‑1 (MQ=255) aaGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat < 3:130315/133‑1 (MQ=255) gAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTa > 2:663596/1‑117 (MQ=255) aaGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGc < 3:983429/149‑1 (MQ=255) aaGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGc < 3:294934/149‑1 (MQ=255) gTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCtg < 1:1281807/149‑1 (MQ=255) tCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTg < 3:782441/91‑1 (MQ=255) tCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTg > 4:782441/1‑91 (MQ=255) tCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCtgg > 2:1280772/1‑149 (MQ=255) tCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCtgg > 4:231405/1‑149 (MQ=255) cTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGctc < 2:1392419/135‑1 (MQ=255) cTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGctc > 1:1392419/1‑135 (MQ=255) gAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAg < 2:368120/130‑1 (MQ=255) gAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAg > 1:368120/1‑130 (MQ=255) aTGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCt > 3:278083/1‑149 (MQ=255) gAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGGCGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCtgg > 2:404528/1‑137 (MQ=255) gAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTgg < 2:1077131/149‑1 (MQ=255) aGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATc > 4:1432428/1‑100 (MQ=255) gTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat < 4:963476/103‑1 (MQ=255) gTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat > 3:1136860/1‑103 (MQ=255) gTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat < 4:1136860/103‑1 (MQ=255) gTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCtgat > 3:963476/1‑103 (MQ=255) gTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTgggg > 1:545941/1‑149 (MQ=255) aTCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATc > 2:1114745/1‑149 (MQ=255) tCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCt < 1:1114745/149‑1 (MQ=255) gTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTa > 3:1028986/1‑149 (MQ=255) tGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGc > 2:643145/1‑115 (MQ=255) tGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGc < 1:643145/115‑1 (MQ=255) aTCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGgtggtg > 1:399125/1‑128 (MQ=255) cTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGt < 2:545941/149‑1 (MQ=255) aCTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCt < 4:511394/149‑1 (MQ=255) aCTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCt < 4:1028986/149‑1 (MQ=255) gCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCt > 1:1026984/1‑133 (MQ=255) tGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCttt < 2:38727/149‑1 (MQ=255) gTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTg > 4:366974/1‑149 (MQ=255) ggATTCGGAAGTGGATTAAGCCCGATCGATCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGtca > 3:934706/1‑149 (MQ=255) ttCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGtcat > 1:440943/1‑147 (MQ=255) ttCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGATggg < 1:310951/119‑1 (MQ=255) ttCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGATggg > 2:310951/1‑119 (MQ=255) ggAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCt < 3:1124802/85‑1 (MQ=255) ggAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAAc < 4:1286722/149‑1 (MQ=255) ggATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCtttt < 2:742421/73‑1 (MQ=255) ggATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCtttt > 1:742421/1‑73 (MQ=255) gATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCtggtg > 3:457679/1‑98 (MQ=255) gATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCtggtg < 4:457679/98‑1 (MQ=255) aTTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTa > 3:229125/1‑87 (MQ=255) aTTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGCGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCaaa > 1:105606/1‑140 (MQ=255) aGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCt > 1:854442/1‑49 (MQ=255) gCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCt < 4:645671/108‑1 (MQ=255) gCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCt > 3:645671/1‑108 (MQ=255) gCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATg > 4:534050/1‑149 (MQ=255) cccGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATgg < 2:764868/149‑1 (MQ=255) cccGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATgg > 1:666398/1‑149 (MQ=255) ccGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCt > 1:465026/1‑106 (MQ=255) ccGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCt < 2:465026/106‑1 (MQ=255) gATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTg > 1:1314059/1‑45 (MQ=255) gATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTg < 2:1314059/45‑1 (MQ=255) aTCGTCCCAGGAACGATCGGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTgggg > 1:345948/1‑100 (MQ=255) aTCGTCCCAGGAACGATCGGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTgggg < 2:345948/100‑1 (MQ=255) tCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTAt < 2:311576/116‑1 (MQ=255) ttCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTGCTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATg > 4:882282/1‑140 (MQ=255) tGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATGGGTGTGCACGATc < 1:316523/149‑1 (MQ=255) gggACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGaaa < 2:735486/129‑1 (MQ=255) gggACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGaaa > 1:735486/1‑129 (MQ=255) gggACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGaaa < 2:888634/129‑1 (MQ=255) gggACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGa < 1:770406/131‑1 (MQ=255) gggACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATGGGTGTGCACGATCa > 3:844204/1‑149 (MQ=255) gggACGAT‑GGGCTCGCTGGCAGAGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGaaa > 1:888634/1‑129 (MQ=255) | GCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGAT‑GGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATGGGTGTGCACGATCATG > NC_000913/436559‑436850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |