| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,568,919 | T→C | 9.1% | intergenic (‑96/+35) | yddW ← / ← gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,568,919 | 0 | T | C | 9.1% | 389.0 / 21.3 | 121 | intergenic (‑96/+35) | yddW/gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| Reads supporting (aligned to +/- strand): ref base T (56/54); new base C (5/6); total (61/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
TATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGACGCCGG > NC_000913/1568773‑1569066 | tATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑At > 4:763318/1‑149 (MQ=255) aTCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATc < 2:932917/149‑1 (MQ=255) ggTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTccc < 1:398046/149‑1 (MQ=255) tcttctAATCGTTAATTTCTTGTTACGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGACAATACGACAGCAAGCACGAGAAAGAGAGCGATGAATT‑AACGCTCCCtt > 3:916065/1‑149 (MQ=255) tctAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑a < 1:874405/136‑1 (MQ=255) tctAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑a > 2:874405/1‑136 (MQ=255) tCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTtata > 2:1338562/1‑149 (MQ=255) tCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTcc < 4:619020/138‑1 (MQ=255) tCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTcc > 3:619020/1‑138 (MQ=255) gTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTta < 2:939394/145‑1 (MQ=255) tttCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTc > 3:824078/1‑149 (MQ=255) cTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTc < 3:1074049/134‑1 (MQ=255) ttGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑At > 1:178993/1‑121 (MQ=255) ttGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑At < 2:178993/121‑1 (MQ=255) ttGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGAc > 1:1308383/1‑149 (MQ=255) tttCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCa > 1:234180/1‑143 (MQ=255) tttCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCa < 2:234180/143‑1 (MQ=255) ttCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATgg < 3:763318/149‑1 (MQ=255) atatCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCt < 2:1308383/149‑1 (MQ=255) cATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtca > 3:1089583/1‑149 (MQ=255) tgCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATtcatc > 4:885213/1‑149 (MQ=255) gCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATtcatca < 4:824078/149‑1 (MQ=255) cTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATcac > 2:545902/1‑149 (MQ=255) ggTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATc > 2:1463239/1‑92 (MQ=255) ggTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATc < 1:1463239/92‑1 (MQ=255) gTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑At > 1:852633/1‑90 (MQ=255) gTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑At < 2:852633/90‑1 (MQ=255) ggTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACa > 3:289041/1‑113 (MQ=255) ggTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACa < 4:289041/113‑1 (MQ=255) gTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtcattca < 2:1215903/135‑1 (MQ=255) gTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtcattca > 1:1215903/1‑135 (MQ=255) tAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTc > 4:562173/1‑87 (MQ=39) aaaCAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtgg < 3:825986/149‑1 (MQ=255) aaCAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggt < 3:885213/149‑1 (MQ=255) aCAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtc > 2:89635/1‑126 (MQ=255) aCAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtc < 1:89635/126‑1 (MQ=255) aCAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggtg > 3:142279/1‑149 (MQ=255) aGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTc < 1:989049/119‑1 (MQ=255) aGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTc > 2:989049/1‑119 (MQ=255) aGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTc > 4:870562/1‑82 (MQ=39) aGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGAT‑AATTCATCGCTc < 3:870562/82‑1 (MQ=38) tgtgCGCTCATTCTCGTTCTTATCCCCGTTAAGTCAATACGACAGCAAGTACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGGTTCTTGTCATTCATCACAATATAGTGTGGTGAACGt < 4:916065/149‑1 (MQ=255) tgtgCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGt < 4:1089583/149‑1 (MQ=255) tgCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGttt > 2:318354/1‑113 (MQ=255) cgcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTga > 1:1129812/1‑115 (MQ=255) cgcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCAc < 1:545902/149‑1 (MQ=255) gcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGt < 4:87217/80‑1 (MQ=255) gcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTg > 1:983810/1‑114 (MQ=255) gcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTg < 2:983810/114‑1 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAgt > 2:1061652/1‑105 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAgt < 1:1061652/105‑1 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggt > 4:129651/1‑137 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggt < 3:129651/137‑1 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTATCTTGTCATTCATCACAATATAgtgt > 1:270201/1‑134 (MQ=255) tCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGt < 3:1416174/113‑1 (MQ=255) cATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCgg < 1:1338562/149‑1 (MQ=255) tcGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTta > 3:223583/1‑76 (MQ=255) gTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTc > 3:566523/1‑101 (MQ=255) gTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATtcatca > 1:1400219/1‑114 (MQ=255) ttATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGc > 4:1059114/1‑58 (MQ=255) aTCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATc > 4:816326/1‑54 (MQ=255) aTCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATc < 3:816326/54‑1 (MQ=255) tCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGgaagaa > 2:1141278/1‑147 (MQ=255) tCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGgaagaa < 1:1141278/147‑1 (MQ=255) ccccGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTg > 4:249795/1‑149 (MQ=255) cccGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGa < 4:142279/149‑1 (MQ=255) ccGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGAc > 3:633820/1‑149 (MQ=255) aGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGaa > 3:759591/1‑115 (MQ=255) aGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGaa < 4:759591/115‑1 (MQ=255) tCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTgg > 3:1108845/1‑148 (MQ=255) tCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTgg < 4:1108845/148‑1 (MQ=255) aaTACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTc > 1:1381381/1‑44 (MQ=18) aaTACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTc < 2:1381381/44‑1 (MQ=18) aTACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCt < 1:1102492/81‑1 (MQ=255) aTACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCt > 2:1102492/1‑81 (MQ=255) cAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGa < 4:633820/149‑1 (MQ=255) cGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGAtt < 3:249795/149‑1 (MQ=255) gAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTg > 1:831760/1‑149 (MQ=255) aaaGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGc < 4:389134/148‑1 (MQ=255) aaaGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGc > 3:389134/1‑148 (MQ=255) aGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTg < 4:1106889/115‑1 (MQ=255) aGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTg > 3:1106889/1‑115 (MQ=255) gggAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCa > 1:371829/1‑149 (MQ=255) ggAGCGATAATTC‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTcc > 4:1465797/1‑147 (MQ=255) ggAGCGAT‑AATTCATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCag > 2:346101/1‑149 (MQ=255) cGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTg < 2:831760/149‑1 (MQ=255) gATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGt > 4:1421697/1‑43 (MQ=255) gATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGt < 3:1421697/43‑1 (MQ=255) gATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTgg < 4:1424788/117‑1 (MQ=255) gATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTgg > 3:1424788/1‑117 (MQ=255) aTGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGc < 2:417668/138‑1 (MQ=255) aTGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGc > 1:417668/1‑138 (MQ=255) tGAATT‑ATCGCTCCCTTGTCTTATAACCTTTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCAcgc > 3:95178/1‑89 (MQ=255) tGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGt < 2:1428637/93‑1 (MQ=255) tGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGa > 4:690441/1‑107 (MQ=255) tGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGACg > 3:791966/1‑149 (MQ=255) aaTT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTg > 4:633342/1‑112 (MQ=255) aaTT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTg < 3:633342/112‑1 (MQ=255) aTT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCaga > 4:1130925/1‑140 (MQ=255) tt‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGtgtg > 3:696405/1‑71 (MQ=255) | TATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGACGCCGG > NC_000913/1568773‑1569066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |