Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,985,112 C→G 20.3% intergenic (‑43/+27) araG ← / ← araF L‑arabinose ABC transporter ATPase/L‑arabinose ABC transporter periplasmic binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,985,1120CG20.3% 160.4 / 39.1 64intergenic (‑43/+27)araG/araFL‑arabinose ABC transporter ATPase/L‑arabinose ABC transporter periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base C (25/26);  new base G (6/7);  total (31/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.60e-01

AACCTGACCGGCATAGCAGTCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGCTACCCAGTT  >  NC_000913/1984965‑1985255
                                                                                                                                                   |                                                                                                                                                
aaCCTGACCGGCATAGCAGTCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGcatca                                                                                                                                                 <  3:188126/149‑1 (MQ=255)
         ggCATAGCAGTCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑ggg                                                                                                                                       <  2:841474/149‑1 (MQ=255)
            aTAGCAGTCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGaa                                                                                                                                    <  4:1226160/149‑1 (MQ=255)
                  gTCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTc                                                                                                                              >  3:983898/1‑149 (MQ=255)
                   tCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTcc                                                                                                                             <  1:242718/149‑1 (MQ=255)
                     aaaaCTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACA‑CCCCTCTGCATGATGCAGA‑ggggg                                                                                                                                     <  1:132524/138‑2 (MQ=255)
                     aaaaCTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACA‑CCCCTCTGCATGATGCAGA‑ggggg                                                                                                                                     >  2:132524/1‑137 (MQ=255)
                       aaCTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATg                                                                                                                                               >  2:1326225/1‑128 (MQ=255)
                       aaCTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATg                                                                                                                                               <  1:1326225/128‑1 (MQ=255)
                          tAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑gggggt                                                                                                                                    <  3:329581/135‑3 (MQ=255)
                          tAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑gggggt                                                                                                                                    >  4:329581/1‑133 (MQ=255)
                          tAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAAt                                                                                                                      >  1:230068/1‑149 (MQ=255)
                            atatCCGTCAGCGCCTTAACGCCGGGAAACGTTTTATCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑gg                                                                                                                                        >  4:1386516/1‑129 (MQ=255)
                            atatCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCTATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑gg                                                                                                                                        <  3:1386516/129‑1 (MQ=255)
                             tatCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑gggg                                                                                                                                      >  4:1032669/1‑130 (MQ=255)
                             tatCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATGATGCAGA‑gggg                                                                                                                                      <  3:1032669/130‑1 (MQ=255)
                                  gTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATg                                                                                                                                               >  3:735368/1‑117 (MQ=255)
                                  gTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATg                                                                                                                                               <  4:735368/117‑1 (MQ=255)
                                         ccTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTaaa                                                                                                       <  2:230068/149‑1 (MQ=255)
                                          cTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAAc                                                                                                      >  3:248682/1‑149 (MQ=255)
                                              aCGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTcc                                                                                                                             <  3:203854/122‑1 (MQ=255)
                                              aCGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTcc                                                                                                                             >  4:203854/1‑122 (MQ=255)
                                                  cGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTtc                                                                                              <  4:983898/149‑1 (MQ=255)
                                                    ggAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTtctc                                                                                            >  3:691579/1‑149 (MQ=255)
                                                     gAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTGACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTcc                                                                                                                             >  4:1054023/1‑115 (MQ=255)
                                                     gAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTcc                                                                                                                             <  3:1054023/115‑1 (MQ=255)
                                                            tttACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGttctt                                                                                    <  4:248682/149‑1 (MQ=255)
                                                              tACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTtcttct                                                                                  >  2:483943/1‑149 (MQ=255)
                                                                              tGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTtctc                                                                                            >  4:788637/1‑123 (MQ=255)
                                                                              tGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTtctc                                                                                            <  3:788637/123‑1 (MQ=255)
                                                                              tGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCAcgcg                                                                  >  1:977654/1‑149 (MQ=255)
                                                                                 gagaTACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTc                                                                                                                              >  4:903844/1‑86 (MQ=255)
                                                                                 gagaTACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTc                                                                                                                              <  3:903844/86‑1 (MQ=255)
                                                                                 gagaTACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGa                                                               <  1:483943/149‑1 (MQ=255)
                                                                                     tACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAg                                                           <  4:691579/149‑1 (MQ=255)
                                                                                           gTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCAc                                                     >  2:193487/1‑149 (MQ=255)
                                                                                              gACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTc                                                  <  2:977654/149‑1 (MQ=255)
                                                                                                      cATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACtt                                          >  4:1377082/1‑149 (MQ=255)
                                                                                                        tAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCaga‑g                                                                                                                                         >  4:1332985/1‑52 (MQ=255)
                                                                                                        tAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCaga‑g                                                                                                                                         <  3:1332985/52‑1 (MQ=255)
                                                                                                        tAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGttctt                                                                                    >  4:405520/1‑105 (MQ=255)
                                                                                                        tAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGttctt                                                                                    <  3:405520/105‑1 (MQ=255)
                                                                                                        tAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCg                                        <  1:193487/149‑1 (MQ=255)
                                                                                                          aCGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGcatca                                                                                                                                                 <  3:1134496/43‑1 (MQ=255)
                                                                                                          aCGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGcatca                                                                                                                                                 >  4:1134496/1‑43 (MQ=255)
                                                                                                             tctcCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTaaa                                   >  2:42727/1‑149 (MQ=255)
                                                                                                                   tGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaaa                                                                             <  1:517275/101‑1 (MQ=255)
                                                                                                                   tGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaaa                                                                             >  2:517275/1‑101 (MQ=255)
                                                                                                                                     cacCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGc           <  1:42727/149‑1 (MQ=255)
                                                                                                                                      acCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGt                                                   >  1:920575/1‑108 (MQ=255)
                                                                                                                                      acCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGt                                                   <  2:920575/108‑1 (MQ=255)
                                                                                                                                       tccccTCTGCATGATGCAGAGGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTg                              <  2:362295/128‑1 (MQ=255)
                                                                                                                                       tccccTCTGCATGATGCAGAGGGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTg                              >  1:362295/2‑129 (MQ=255)
                                                                                                                                        ccccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCGCGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTg                              <  4:853422/127‑1 (MQ=255)
                                                                                                                                        ccccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTg                              >  3:853422/1‑127 (MQ=255)
                                                                                                                                         cccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaaa                                                                             >  3:638301/1‑79 (MQ=255)
                                                                                                                                         cccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTaaa                                                                             <  4:638301/79‑1 (MQ=255)
                                                                                                                                         cccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCtttt             >  1:677316/1‑143 (MQ=255)
                                                                                                                                         cccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCtttt             <  2:677316/143‑1 (MQ=255)
                                                                                                                                          ccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTcc                                                                                           >  1:543016/1‑64 (MQ=255)
                                                                                                                                          ccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTcc                                                                                           <  2:543016/64‑1 (MQ=255)
                                                                                                                                          ccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTtcttct                                                                                  <  2:1118425/73‑1 (MQ=255)
                                                                                                                                          ccTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTtcttct                                                                                  >  1:1118425/1‑73 (MQ=255)
                                                                                                                                           ctctGCATGATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAAc                    >  1:2804/1‑134 (MQ=255)
                                                                                                                                           ctctGCATGATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAAc                    <  2:2804/134‑1 (MQ=255)
                                                                                                                                              tGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGCTACCCAGtt  >  3:671469/1‑149 (MQ=255)
                                                                                                                                              tGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGCTACCCAGtt  <  3:1377082/149‑1 (MQ=255)
                                                                                                                                                catcatGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGCTACCCAg    >  2:1364966/1‑145 (MQ=255)
                                                                                                                                                catcatGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGCTACCCAg    <  1:1364966/145‑1 (MQ=255)
                                                                                                                                                 atcatGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTg            <  3:578300/136‑1 (MQ=255)
                                                                                                                                                 atcatGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTg            >  4:578300/1‑136 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
AACCTGACCGGCATAGCAGTCAAAACTAATATCCGTCAGCGCCTTAACGCCGGGAAACGTTTTACCGATGCCGCGAAATGAGAGATACGGGGTAGACTGTTGCATAACGTCTCCGTGAATCACTGGTCGTTCACACCCCCTCTGCATCATGCAGA‑GGGGAATTTTTCCGGCAAATTACTTACCGCCTAAACCTTTTTTCTCCAGTTCTTCTTTAAAGTTGTCACGCGTGATCAGTACCACGTCGGTAACTTCGGTAAATTTTGGCGGTTCAACGTCTTTTGCTACCCAGTT  >  NC_000913/1984965‑1985255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑