| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,976,321 | C→A | 10.7% | noncoding (65/82 nt) | omrB ← | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,976,321 | 0 | C | A | 10.7% | 377.4 / 24.8 | 112 | noncoding (65/82 nt) | omrB | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (49/51); new base A (6/6); total (55/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
ATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACC > NC_000913/2976179‑2976457 | atACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTAGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACATGCGCATCTGCGCa > 2:539913/1‑149 (MQ=255) ccTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGc < 1:215042/149‑1 (MQ=255) gtattGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTaa < 1:1311819/146‑1 (MQ=255) ttGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTc > 3:774406/1‑149 (MQ=255) ttGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTc < 4:774406/149‑1 (MQ=255) acgacgACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTc > 3:851937/1‑142 (MQ=255) acgacgACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTc < 4:851937/142‑1 (MQ=255) acgacgACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGa < 1:539913/149‑1 (MQ=255) cgacgaCTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtgt < 1:8557/137‑1 (MQ=255) gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTACTCAACCCGaa > 2:424977/1‑145 (MQ=255) gacTCTTCGACAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCTCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGaa < 1:424977/145‑1 (MQ=255) ttCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCAAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGa < 4:1015099/146‑1 (MQ=255) ttCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCAAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGa > 3:1015099/1‑146 (MQ=255) cGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAc > 4:348009/1‑149 (MQ=255) gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc > 4:197470/1‑149 (MQ=255) ccAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCt < 3:197470/149‑1 (MQ=255) gCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCa > 2:1179375/1‑103 (MQ=255) gCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCa < 1:1179375/103‑1 (MQ=255) gCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc > 4:888506/1‑149 (MQ=255) gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAt < 4:358317/105‑1 (MQ=255) gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAt > 3:358317/1‑105 (MQ=255) gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTg < 4:941919/149‑1 (MQ=255) cAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 2:52151/1‑149 (MQ=255) cAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg < 3:348009/149‑1 (MQ=255) aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTc > 4:869833/1‑130 (MQ=255) aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTc < 3:869833/130‑1 (MQ=255) aaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGa < 2:144968/125‑1 (MQ=255) aaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGa > 4:468447/1‑149 (MQ=255) gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt < 2:951964/103‑1 (MQ=255) gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt > 1:951964/1‑103 (MQ=255) gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca < 4:1319632/149‑1 (MQ=255) aaTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac < 3:888506/149‑1 (MQ=255) aaGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg < 1:366565/139‑1 (MQ=255) aaGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 2:366565/1‑139 (MQ=255) aGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcaccac < 3:905054/147‑1 (MQ=255) aGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGAGGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcaccac > 4:905054/1‑147 (MQ=255) ggAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCt > 3:1277243/1‑74 (MQ=255) ggAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCt < 4:1277243/74‑1 (MQ=255) aaTGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCaa < 4:1376920/149‑1 (MQ=255) tGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAAc < 1:52151/149‑1 (MQ=255) cAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCt > 2:748670/1‑76 (MQ=255) cAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCt < 1:748670/76‑1 (MQ=255) aaCGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 2:924397/1‑128 (MQ=255) aaCGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTg > 1:1084945/1‑149 (MQ=255) gAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAg < 3:468447/149‑1 (MQ=255) tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACtt < 1:109601/130‑1 (MQ=255) tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACtt > 2:109601/1‑130 (MQ=255) gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCt < 3:443453/82‑1 (MQ=255) tAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAg > 2:1097268/1‑91 (MQ=255) tAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATCTGCTCAACCCGAAg < 1:1097268/91‑1 (MQ=255) ttGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAc < 1:133798/97‑1 (MQ=255) gTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACt > 1:533454/1‑91 (MQ=255) gTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACt < 2:533454/91‑1 (MQ=255) tCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAt > 3:856506/1‑65 (MQ=255) tCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAt < 4:856506/65‑1 (MQ=255) ggTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCgg > 2:614152/1‑149 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACtt > 3:1397016/1‑118 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACtt < 4:1397016/118‑1 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTa > 4:358501/1‑120 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTa < 3:358501/120‑1 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc < 3:1196398/137‑1 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc > 4:1196398/1‑137 (MQ=255) ttgcAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc > 2:991041/4‑104 (MQ=255) ttACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg < 2:577086/100‑1 (MQ=255) ttACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 1:577086/1‑100 (MQ=255) ttACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc < 1:991041/104‑1 (MQ=255) aCAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTa > 3:1443486/1‑111 (MQ=255) tgaCCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTc > 3:1217290/1‑149 (MQ=255) tgaCCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTc < 2:1084945/149‑1 (MQ=255) ggC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCaaa < 4:1217290/149‑1 (MQ=255) gC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGaa < 2:60520/106‑1 (MQ=255) gC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGaa > 1:60520/1‑106 (MQ=255) aaaaaaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCaa > 2:1174650/1‑72 (MQ=255) aaaaaaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCaa < 1:1174650/72‑1 (MQ=255) accagccTGCGCAGATGCGCAGGTTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc < 1:68368/103‑1 (MQ=255) accagccTGCGCAGATGCGCAGGTTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc > 2:68368/6‑108 (MQ=255) aaaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGccac > 2:1008887/1‑113 (MQ=255) aaaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGccac < 1:1008887/113‑1 (MQ=255) aaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcacca > 2:579403/1‑85 (MQ=255) aaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcacca < 1:579403/85‑1 (MQ=255) cagccTGCGCAGATGCGCAGGTTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca > 3:1122065/4‑81 (MQ=38) cagccTGCGCAGATGCGCAGGTTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca < 4:1122065/78‑1 (MQ=38) cagccTGCGCAGATGCGCAGGTTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAAcc > 4:190623/4‑149 (MQ=255) agccTGCGCAGATGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg < 2:33969/73‑1 (MQ=255) agccTGCGCAGATGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 1:33969/3‑75 (MQ=255) aaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGc < 4:1367384/100‑1 (MQ=255) aaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGc > 3:1367384/1‑100 (MQ=255) gccTGCGCAGATGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTa > 2:669847/2‑87 (MQ=255) gccTGCGCAGATGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTa < 1:669847/86‑1 (MQ=255) gccTGCGCAGATGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGaa > 4:174171/2‑97 (MQ=255) gccTGCGCAGATGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGaa < 3:174171/96‑1 (MQ=255) cTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTaa > 1:1217562/1‑143 (MQ=255) cTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTaa < 2:1217562/143‑1 (MQ=255) gcgcATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg < 4:345716/84‑1 (MQ=255) gcgcATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg > 3:345716/1‑84 (MQ=255) aTCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAAt < 4:428035/112‑1 (MQ=255) tCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAAc < 1:387627/117‑1 (MQ=255) tCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAAc > 2:622975/1‑117 (MQ=255) tCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAAc < 1:622975/117‑1 (MQ=255) tCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAAc > 2:387627/1‑117 (MQ=255) | ATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACC > NC_000913/2976179‑2976457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |