| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,390,016:1 | +C | 6.9% | intergenic (+52/+32) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,390,016 | 1 | . | C | 6.9% | 491.3 / 32.1 | 116 | intergenic (+52/+32) | yfbP/nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Reads supporting (aligned to +/- strand): ref base . (51/57); new base C (3/5); total (54/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTAC > NC_000913/2389872‑2390159 | gAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGTATG‑Tcgg > 4:210944/1‑149 (MQ=255)gAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcgg > 2:62421/1‑149 (MQ=255)gAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tc > 1:626429/1‑147 (MQ=255)gAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tc < 2:626429/147‑1 (MQ=255) aaCGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggc < 4:823951/149‑1 (MQ=255) cGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcgg < 1:405721/149‑1 (MQ=255) cGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcgg < 2:356186/149‑1 (MQ=255) cGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcgg < 1:550438/149‑1 (MQ=255) gCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCggcgg‑c > 4:798253/1‑149 (MQ=255) gCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcggt < 3:177015/149‑2 (MQ=255) cTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcggtt < 3:262638/149‑3 (MQ=255) tATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Ctt < 4:724686/149‑1 (MQ=255) tATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Ctt < 3:430883/149‑1 (MQ=255) tATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Ctt > 1:630487/1‑149 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAGAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa > 1:580784/1‑149 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa > 2:253043/1‑149 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa < 4:13023/149‑1 (MQ=255) ttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACt < 3:365155/149‑1 (MQ=255) atatCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTAc < 3:346928/149‑1 (MQ=255) tatCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACa > 2:219032/1‑149 (MQ=255) gagaactGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACa < 3:147419/143‑1 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCTCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACaaa < 3:77861/149‑1 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACaaa < 3:117961/149‑1 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACaaa < 2:848070/149‑1 (MQ=255) gATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGt > 1:687208/1‑149 (MQ=255) gATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGt < 1:219032/149‑1 (MQ=255) tGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTaa < 3:798253/149‑1 (MQ=255) aaTGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACa < 1:597177/149‑1 (MQ=255) aaTGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACa < 4:395485/149‑1 (MQ=255) aaTGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACa < 4:42032/149‑1 (MQ=255) aaTGGCGGGAAAAATTAAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGAACACAGTTCTCTTAACGCTCTGCGTCTATCTACCATCCCTTATTTTACAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGCCTTATAAAGAAACa < 2:295882/149‑1 (MQ=255) ggCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGAt < 3:388731/149‑1 (MQ=255) gCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGAtt < 2:670457/149‑1 (MQ=255) gCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGAtt < 2:630487/149‑1 (MQ=255) cGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTa < 4:194150/149‑1 (MQ=255) ggCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACa > 2:19979/1‑149 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGa > 3:31585/1‑133 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGa < 4:31585/133‑1 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATTAGCGGCAtt < 4:334364/149‑1 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCAtt < 2:541088/149‑1 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCAtt < 4:707258/149‑1 (MQ=255) gCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTg > 2:425523/1‑149 (MQ=255) tGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACg > 2:832465/1‑149 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGca > 1:115549/1‑149 (MQ=255) ttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTTCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGcac > 2:143613/1‑149 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGc > 1:180099/1‑149 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGTATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt < 3:210944/149‑1 (MQ=255) acaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATa < 3:111332/149‑1 (MQ=255) acaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATa > 2:743554/1‑149 (MQ=255) acaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATa < 1:199334/149‑1 (MQ=255) aGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATaca > 3:297110/1‑149 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac < 1:345285/149‑1 (MQ=255) ttCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAcc > 2:832849/1‑149 (MQ=255) cACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCa > 3:877380/1‑149 (MQ=255) cACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCa > 1:712375/1‑149 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCAtt < 1:173525/105‑1 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCAtt > 2:173525/1‑105 (MQ=255) cTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc > 3:557402/1‑149 (MQ=255) cTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc > 4:817834/1‑149 (MQ=255) cTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc > 2:509841/1‑149 (MQ=255) cTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc > 3:269626/1‑149 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTa < 1:222944/90‑1 (MQ=255) tAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc < 1:19979/149‑1 (MQ=255) gCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGTATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGt < 1:577410/149‑1 (MQ=255) tctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAc > 1:419201/1‑149 (MQ=255) tatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTg > 2:411502/1‑149 (MQ=255) tatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTg > 3:671471/1‑149 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa > 3:231385/1‑138 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa < 4:231385/138‑1 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCa < 2:712375/149‑1 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCaga < 3:214614/149‑1 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCaga > 1:53072/1‑149 (MQ=255) actaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCagag < 3:817834/149‑1 (MQ=255) ctaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAgaga > 3:392136/1‑149 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAccc > 1:275573/1‑123 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAccc < 2:275573/123‑1 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGAt > 4:300777/1‑149 (MQ=255) tCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCagag > 3:591805/1‑145 (MQ=255) tCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCCGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCatag < 4:591805/145‑1 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTaa > 3:491615/1‑95 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTaa < 4:491615/95‑1 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAc < 3:492918/129‑1 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAc > 4:492918/1‑129 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca < 2:580784/149‑1 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 3:45443/1‑149 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTCACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGc < 2:255110/147‑1 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 3:695269/1‑149 (MQ=255) tttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc < 1:793368/149‑1 (MQ=255) tttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc < 1:832849/149‑1 (MQ=255) ttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACg > 1:46393/1‑149 (MQ=255) tCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGtt > 4:411303/1‑96 (MQ=255) gtcagaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGAt > 4:79932/6‑149 (MQ=38) aGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAcc > 1:583846/1‑149 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 1:6833/1‑149 (MQ=255) gAAAAACCGCCAAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 1:691070/1‑149 (MQ=255) gaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 1:879354/2‑149 (MQ=255) agccgccgA‑CATGCTCGGCGG‑TTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgcccg > 2:507/3‑149 (MQ=255) ccgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCcgcg < 1:598227/149‑1 (MQ=255) cgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCgcgc < 2:687208/149‑1 (MQ=255) aGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTAc < 2:53072/149‑1 (MQ=255) | GAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTAC > NC_000913/2389872‑2390159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |