| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,736,323 | A→G | 5.7% | intergenic (+166/+30) | xylR → / ← bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,736,323 | 0 | A | G | 5.7% | 1712.2 / 58.1 | 525 | intergenic (+166/+30) | xylR/bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Reads supporting (aligned to +/- strand): ref base A (248/242); new base G (10/20); total (261/264) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.93e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 530 total aligned reads displayed.
GGCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCA > NC_000913/3736175‑3736471 | gCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGAc < 2:723563/149‑1 (MQ=255) gCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGAc > 1:423668/1‑149 (MQ=255) gTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGGACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa > 3:288106/1‑149 (MQ=255) acaTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGt < 1:478686/148‑1 (MQ=255) acaTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTc > 3:802841/1‑149 (MQ=255) aTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCgg > 1:875506/1‑149 (MQ=255) tCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGa < 1:497435/149‑1 (MQ=255) tCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGa < 4:686850/149‑1 (MQ=255) aGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATa > 1:155049/1‑149 (MQ=255) ggTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TTGTCAGTCGGATaa < 4:351612/149‑1 (MQ=255) gTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TTGTCAGTCGGATAAg < 2:860933/149‑1 (MQ=255) gTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TTGTCAGTCGGATAAg < 1:747054/149‑1 (MQ=255) gTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAg < 2:74396/149‑1 (MQ=255) tAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAgg < 2:586515/149‑1 (MQ=255) aCGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCt > 1:704493/1‑149 (MQ=255) gTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGaa < 3:615284/149‑1 (MQ=255) tGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGaaa < 1:344915/149‑1 (MQ=255) tGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGaaa < 2:246727/149‑1 (MQ=255) ttGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGc > 3:10690/1‑149 (MQ=255) ttGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGc > 3:833023/1‑149 (MQ=255) gTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCaa < 2:443758/149‑1 (MQ=255) gTCGGATAAGGCGTTCACGCCGCATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGAt < 1:240384/130‑1 (MQ=255) gTCGGATAAGGCGTTCACGCCGCATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCaa > 2:363120/1‑149 (MQ=255) tCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt > 1:178320/1‑149 (MQ=255) cGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAtt > 3:417393/1‑149 (MQ=255) ggATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTa > 1:696419/1‑149 (MQ=255) gATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTAc > 2:325024/1‑149 (MQ=255) ataaggcgTTCACGCCGCATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACa > 4:285181/5‑149 (MQ=255) ggcgTGAACGCCTTATCCGACCTACCCGGCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACTAAGTAAAAGGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATg > 4:541578/1‑149 (MQ=255) gcgTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTCCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATgc < 2:780800/149‑1 (MQ=255) aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCg < 1:543380/112‑1 (MQ=255) aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGcgccgc > 1:721207/1‑149 (MQ=255) aCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCcgcg > 2:211343/1‑149 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAt < 1:369268/149‑1 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTa > 1:194781/1‑149 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGATCAAGGAAATGCAATTACATATGCGCCGCGATTa > 1:734899/1‑149 (MQ=255) ttATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTaa > 2:616912/1‑149 (MQ=255) cgatctaCCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTAAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAAc < 1:63853/143‑1 (MQ=255) cGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGtt > 2:71284/1‑149 (MQ=255) cGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGtt < 4:769838/149‑1 (MQ=255) cGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGtt < 3:769274/149‑1 (MQ=255) gACCTACCCGCCAGGCATGATAAAACTGACCAACAACGGTTCAGGCTCGTAGCTCAACTGGCGGAGACAAATTAAAAAGCCATCTCCGAC‑GGACAAGACGGATAAGGCTCAAGGAAAAGCAATTACATAAGCGCCGCGATTAAACGTTg < 2:181836/149‑1 (MQ=255) gACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg < 1:774682/149‑1 (MQ=255) aCCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTgg > 2:267170/1‑149 (MQ=255) ccTCCCCCCCAGGCATGATAAACCGCACCAACAACGCTTCAGGCTCGTAGCTCCCCTGCCTGAGACACAGTAAAAAGCCCTCTCCGAC‑TGTCCAGTCGCCTCCGGCTCTAGGAAACGCAATTCCATCGGCGCCGCGATTAGccagatcg > 2:63853/1‑143 (MQ=255) tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTa > 4:102732/1‑149 (MQ=255) ccGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATcc > 3:866630/1‑149 (MQ=255) cGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCt < 2:121565/149‑1 (MQ=255) aTGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACAtt < 4:205028/149‑1 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACACAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGc > 4:798626/1‑149 (MQ=255) tAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGa > 3:432574/1‑149 (MQ=255) tAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGa > 2:412342/1‑149 (MQ=255) aaaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa > 2:507529/1‑149 (MQ=255) aaaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa < 1:842856/149‑1 (MQ=255) aaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACa > 2:138299/1‑149 (MQ=255) aCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg < 4:497004/149‑1 (MQ=255) cGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAgg < 1:892732/149‑1 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGt > 3:517397/1‑119 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAg > 4:4571/1‑149 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAg < 3:733411/149‑1 (MQ=255) caacaaCGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgtt > 2:682237/1‑149 (MQ=255) aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttg < 1:325024/149‑1 (MQ=255) aacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg < 2:342427/139‑1 (MQ=255) acGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTtat < 4:133498/149‑1 (MQ=255) gCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa < 3:216142/149‑1 (MQ=255) gCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa < 4:432574/149‑1 (MQ=255) tCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAActc < 3:552043/149‑1 (MQ=255) ggCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTc < 1:562551/149‑1 (MQ=255) ggCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTc < 4:59339/149‑1 (MQ=255) gCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTcc < 1:114742/149‑1 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCttt > 1:386979/1‑149 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGCAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt < 2:88804/75‑1 (MQ=255) tAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg < 3:199228/149‑1 (MQ=255) gCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTcc > 1:98758/1‑142 (MQ=255) cTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTc < 1:812443/149‑1 (MQ=255) tCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCg > 3:676886/1‑149 (MQ=255) tCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCg > 4:628992/1‑149 (MQ=255) aaCTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAg > 2:552426/1‑149 (MQ=255) aaCTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAg > 4:313415/1‑149 (MQ=255) tGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTa > 3:48679/1‑114 (MQ=255) tGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCt > 3:586485/1‑149 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCa > 3:655288/1‑149 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCAGCGATTAACCGCTGGTTATCCTGGTACATTGCGAACAGGTAGCTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCa > 2:494405/1‑149 (MQ=255) gcAAAGTAAAAAGCCTTACCCGAC‑TGACAAGACGGATAAGGCTCAGGGAAATGCAATTACATATGCGCCGCCACTAACCGTTTGTTATCCTGGAACATTATGCACCGGTGGTTGTTATTACTATTCCTTTTGGTCGAGTAGCCCttaaa > 2:30198/2‑146 (MQ=255) aCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg > 4:236590/1‑149 (MQ=255) aaaGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTCGGTCGAGTAGCCCTTCAGCt > 2:525907/1‑149 (MQ=255) gTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt < 1:267170/149‑1 (MQ=255) gTAAAAAGCCCTATCCGAC‑TGACAATTCGGATAAGGCTCAAGGAAATGCAACTACATATGCGCCTCGATTAACCATCGACTATCCTGGTACATTGCGAACAGGCAGATGTTATAACTCTTCCCTTTAGTCGAGTAGCCCTTCAGCTtgt > 2:380719/1‑149 (MQ=255) ttgaGCCTTATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGa < 2:47200/126‑1 (MQ=39) aaaaGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGaa < 1:593025/149‑1 (MQ=255) ccTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCttt > 4:719168/1‑118 (MQ=255) cTTATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCg > 3:359883/1‑149 (MQ=255) ttATCCGACTTGTC‑AGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGc > 1:60514/1‑149 (MQ=255) ttATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGc > 3:152603/1‑149 (MQ=255) ttATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGc < 3:388517/149‑1 (MQ=255) ttATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGc < 1:138299/149‑1 (MQ=255) ttATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGc < 3:4571/149‑1 (MQ=255) tATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCGTGTGAATCATCGCt < 1:671494/149‑1 (MQ=255) cGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTgg < 2:825978/149‑1 (MQ=255) gAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGc > 3:334534/1‑149 (MQ=255) | GGCGTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCA > NC_000913/3736175‑3736471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |