| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,051 | C→G | 12.0% | intergenic (+34/‑164) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,051 | 0 | C | G | 12.0% | 1353.0 / 147.9 | 439 | intergenic (+34/‑164) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (201/183); new base G (18/35); total (219/220) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-02 | |||||||||||
Only 100 of 439 total aligned reads displayed.
ACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCC > NC_000913/3780904‑3781198 | aCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCa < 1:445885/149‑1 (MQ=255)aCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCa < 1:588352/149‑1 (MQ=255) cGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCTCTGATGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAATGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTAAg < 4:549334/149‑1 (MQ=255) cGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAg < 3:17023/149‑1 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAgg > 1:861386/1‑149 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAgg < 1:71435/149‑1 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGACTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAgg < 2:854960/149‑1 (MQ=255) cTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGagag < 4:489212/149‑1 (MQ=255) tGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCGTAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAgg < 3:96078/149‑1 (MQ=255) tGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAgg < 2:575141/149‑1 (MQ=255) tGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAgg < 3:276961/149‑1 (MQ=255) tGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAgg < 3:434037/149‑1 (MQ=255) tGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAgg < 3:606557/149‑1 (MQ=255) gcgcGAAATCGTTCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAgggg > 3:515058/1‑149 (MQ=255) cgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg < 3:71993/145‑1 (MQ=255) cgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg > 4:71993/1‑145 (MQ=255) gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGAAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCACTCACCCTAACCCTCTCCCTGAGGGAGAgggttagg < 4:449045/149‑6 (MQ=255) aTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTc < 2:349316/149‑1 (MQ=255) aTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTc > 3:122919/1‑149 (MQ=255) tCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑g > 4:698512/1‑149 (MQ=255) gATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑Ggc > 1:754436/1‑149 (MQ=255) tCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑Ggcgc > 3:416310/1‑149 (MQ=255) cAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCt < 4:657980/149‑1 (MQ=255) aGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGTGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCtg > 4:747933/1‑149 (MQ=255) aGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAggg < 3:651676/134‑1 (MQ=255) aGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCtg > 3:618944/1‑149 (MQ=255) aGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCtg > 3:188533/1‑149 (MQ=255) ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCtgtat > 1:244538/1‑145 (MQ=255) ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTAc < 1:314331/149‑1 (MQ=255) cGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTcc < 1:200066/149‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTccc > 2:812716/1‑149 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTc > 4:794432/1‑149 (MQ=255) aGATTTGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGTAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCa > 4:603422/1‑149 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑CGCGCTGTATGTACTCCCTCAc < 2:429873/149‑1 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCActc > 2:155003/1‑149 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCActc > 4:220775/1‑149 (MQ=255) ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAAc < 1:482749/149‑1 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGTGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCa > 1:156843/1‑149 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAgg < 2:670581/95‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttt > 2:625501/1‑149 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttt > 4:679086/1‑149 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttt > 4:316436/1‑149 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttt < 2:493526/149‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttt > 3:572222/1‑149 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttttt < 2:25683/149‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTtctc > 1:789271/1‑149 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCttttt < 3:252817/141‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCt > 3:347969/1‑149 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCActct < 4:246947/118‑1 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTc > 3:76105/1‑149 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCCCGc < 4:828671/149‑1 (MQ=255) cACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGGTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCt > 4:157257/1‑149 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTTAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 2:394678/149‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 3:378906/149‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 2:186264/149‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCACCTCCgg < 2:589268/149‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 3:458317/149‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga > 3:138557/1‑149 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga > 1:387761/1‑149 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag < 4:188533/149‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 4:416310/149‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 3:811074/149‑1 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 3:532193/149‑1 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 3:747933/149‑1 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 4:130039/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:272843/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:6521/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 2:474916/149‑1 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgggg > 1:180375/1‑149 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag > 4:758946/1‑139 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg > 4:328180/1‑149 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 2:283459/149‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 1:625501/149‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 1:122775/149‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa > 2:539646/1‑149 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:231820/149‑1 (MQ=255) cATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAg < 1:409665/149‑1 (MQ=255) tttGCGCCCCCTCACCCTAACCCTCTCCCCCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACt > 3:783264/1‑149 (MQ=255) tGCGCCCCCTCACCCAACCCCCCCCCCTCGGGGGGGGGGGCCCGTCC‑GGTGCTTTATCTCCCCCCCCCCTCTAAAACGACC‑CCGCTCTTTTTTTTCCCCCCCCGCCCCCCGGGGGAGGGGGCGGGGGTGAGGGGAAAAGGCCGCACTGc < 4:261717/149‑1 (MQ=255) gccccccctccccctAACCCTCCCCCTCGGGGAGGGGGGCCCGTTC‑GGCCTTGTATGCACCCCCTCACTCTGAAACGCCA‑CCGCACTTTTTTTTTCCCCCCCGCCCCCCGGGGGAGGGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCt < 4:637232/146‑1 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg > 3:851413/1‑105 (MQ=255) cccccAAACCCCCCCCCCCGGGGGGGGGGGACCGTTC‑GGGCCTGTTTGACCGCCCCCACTCGAAAACGCCC‑CCGCACTTTTTTTTTCTCCCCCCCCCCCCGGGGGAGGGGGCGGGGGTGGGGGTAAAAGGCCGCACTGCTCACCAAttt < 2:714984/147‑1 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 3:21934/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 4:383235/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 1:818524/1‑149 (MQ=255) cTACCCCTC‑CCCCCCGGGAGGGGGGGACGTTCGGGCCCTTTTTGTCCTCCCCCCCCCGGAAAAGACC‑CCGCCTTTTTTTTTCCCCCCTCCCCCCCCGGGGGGGGGGGCGGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 1:890256/149‑1 (MQ=255) cTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:414993/1‑149 (MQ=255) cTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:890358/1‑149 (MQ=255) gttcccTCGCCGTCGCGGAGAGGGGCCCGTTC‑GGCGCTCGTTGCACTCCCTCACTGT‑AAACGGGACCCCCACTTTTTTTTTACCCCGCGCCCGAGCGGGGGGGGGGCGGGGGTGAGGAGAAAAGGCCGCACTGCTCACCAATTTTCTGc < 2:779767/146‑1 (MQ=255) ccccTCTCCCTGAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTa > 2:747367/2‑149 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTAt > 3:4844/1‑149 (MQ=255) ccTCTCCCTGAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:523526/1‑149 (MQ=255) ccTCTCCCTGAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:610344/1‑149 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 3:684957/1‑149 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGATGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAATGGCCGCACTCCTCACCAATTTTCGGCTATc > 4:561411/1‑149 (MQ=255) ccTCTCCCCCAGGGAGGGGGGCCCGTTC‑GGCGTTTTATGTACCCCCCCCCTCGGAACCGACA‑CCGCACTTTTTTTTTCCCCCCCCCCCCCCGGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc < 4:586780/149‑1 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGATAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 4:776344/1‑149 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag > 2:334859/1‑98 (MQ=255) tCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 1:775776/1‑149 (MQ=255) tCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 1:570536/1‑149 (MQ=255) | ACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTC‑GGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCC > NC_000913/3780904‑3781198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |