| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,424,468 | A→C | 7.3% | intergenic (+82/+48) | ulaF → / ← yjfY | L‑ribulose 5‑phosphate 4‑epimerase/YhcN family protein, periplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,424,468 | 0 | A | C | 7.3% | 391.5 / 15.4 | 117 | intergenic (+82/+48) | ulaF/yjfY | L‑ribulose 5‑phosphate 4‑epimerase/YhcN family protein, periplasmic |
| Reads supporting (aligned to +/- strand): ref base A (62/46); new base C (3/6); total (65/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
CTTCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTC > NC_000913/4424323‑4424617 | cTTCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑gg < 2:282843/149‑1 (MQ=255) ttCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑ggg > 3:82698/1‑149 (MQ=255) ttCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑ggg > 2:287490/1‑149 (MQ=255) ccTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑ggggg < 2:474956/149‑1 (MQ=255) ccTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATACCGCGGCCGTTTTTC‑AAAAAAAAGCCCCCTTCGCA‑ggggg < 4:431959/149‑1 (MQ=255) cTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTTCGCA‑GGGGgc < 4:257537/149‑1 (MQ=255) tgatgaATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGgca > 2:488711/1‑149 (MQ=255) gatgaATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAAAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTAGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTTCGCA‑GGGGgctt < 2:172241/149‑3 (MQ=255) atgaATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGgcaaa < 4:497812/149‑1 (MQ=255) atgaAAAAAAACTTAATGCGTAAACACGGTCCTACCGCTTATTACGGGCAAAAGTAGAACACGCGCTCCGAAAATTTCCTTCCCCGGGAGATAACTGGTCTAATTCCGCACCCGTTTTTA‑AAAAAAAAGCCCCCTTCGCA‑GGGGgcttt < 4:24114/149‑4 (MQ=255) aTAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTTCGCA‑GGGGgcttttttt < 2:410888/149‑8 (MQ=255) aTAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTTCGCA‑GGGGgcttttttt < 3:217460/149‑8 (MQ=255) tAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGgcaaagcaaa < 4:478548/149‑1 (MQ=255) tAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGgcaaagcaaa > 4:194790/1‑149 (MQ=255) tAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGgcaaagcaaa > 4:313913/1‑149 (MQ=255) tAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTACTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGgcaaagcaac > 1:640625/1‑148 (MQ=255) acacTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTa > 3:293362/1‑149 (MQ=255) acTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATg < 1:57126/149‑1 (MQ=255) ttCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGc > 4:152434/1‑149 (MQ=255) tCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCa > 1:344101/1‑149 (MQ=255) cATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCaa > 3:832959/1‑149 (MQ=255) aTGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAAt > 2:645057/1‑149 (MQ=255) aTGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAAt > 2:429352/1‑149 (MQ=255) aTGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAAt < 2:132815/149‑1 (MQ=255) aTGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAAt < 1:363356/149‑1 (MQ=255) tGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATg > 1:165931/1‑149 (MQ=255) tGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATg > 4:423523/1‑149 (MQ=255) tAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTc > 2:700590/1‑149 (MQ=255) tAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTc > 3:98434/1‑149 (MQ=255) aaCACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGt > 3:278505/1‑149 (MQ=255) acacGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGtt < 2:696707/149‑1 (MQ=255) acacGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGtt < 3:769171/149‑1 (MQ=255) tCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTtat > 3:832574/1‑149 (MQ=255) tAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATAcc > 2:831312/1‑149 (MQ=255) gCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑ggg > 1:582214/1‑107 (MQ=255) gCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑ggg < 2:582214/107‑1 (MQ=255) gCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGt > 2:879343/1‑149 (MQ=255) gCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGt > 3:581397/1‑149 (MQ=255) gCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGt < 1:648523/149‑1 (MQ=255) ttattaCGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGc < 2:424635/149‑1 (MQ=255) taCGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGc < 3:423523/149‑1 (MQ=255) gggCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGAt < 3:267408/149‑1 (MQ=255) gCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATaa > 3:55082/1‑149 (MQ=255) cAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATaaa < 1:145654/149‑1 (MQ=255) aGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAat > 3:401943/1‑149 (MQ=255) aGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAat < 1:645057/149‑1 (MQ=255) gTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATcc > 2:226040/1‑149 (MQ=255) tAGAACACGCTCTGGGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGt < 4:328340/121‑1 (MQ=255) tAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGt > 3:328340/1‑121 (MQ=255) tAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCcg > 3:122992/1‑149 (MQ=255) acGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTgg > 1:129659/1‑149 (MQ=255) gcgcTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTg < 1:203278/121‑1 (MQ=255) gcgcTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTg > 2:203278/1‑121 (MQ=255) tGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGc > 3:214024/1‑149 (MQ=255) ggAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCatat < 1:354078/149‑1 (MQ=255) aaTTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGc < 2:344101/149‑1 (MQ=255) aTTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGcc < 1:611109/149‑1 (MQ=255) aTTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGcc < 1:651487/149‑1 (MQ=255) ttcctCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACt > 2:433421/1‑149 (MQ=255) tCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTcccc > 1:659643/1‑149 (MQ=255) gggAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCgg > 3:512823/1‑149 (MQ=255) aTAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGGCGTTACTCCCCGGTTccc < 4:527845/149‑1 (MQ=255) aTAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTccc < 1:67826/149‑1 (MQ=255) aCTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCa > 3:412132/1‑149 (MQ=255) aCTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAACCCCCTTCCAAGGGGGGCAAGGAAAACT‑TTGCAATGGTTCGTTGGTTAAACCCTGTGGTTACCATAAATTTTCGCCGTGGCCTTCATATTTCCCTTTATCCCCGGTTtcccga > 3:613902/1‑146 (MQ=255) cTGGTCTAATTCCGCAGACGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCAt < 4:224375/149‑1 (MQ=255) tGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTcc < 2:180005/143‑1 (MQ=255) tGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTcc > 1:180005/1‑143 (MQ=255) tGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATc < 3:683187/149‑1 (MQ=255) ggTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCACGCATCa > 3:347479/1‑149 (MQ=255) tCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGa > 3:873645/1‑149 (MQ=255) tCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGa > 3:206540/1‑149 (MQ=255) tCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGa > 2:795230/1‑149 (MQ=255) tAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAAt > 1:846078/1‑149 (MQ=255) ttCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTAc < 3:618507/149‑1 (MQ=255) tCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:844957/149‑1 (MQ=255) ccGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGt > 4:657556/1‑70 (MQ=255) cAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgt < 4:873645/149‑1 (MQ=255) ccGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgtagt > 1:7560/1‑149 (MQ=255) tttC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGtt < 3:554944/149‑1 (MQ=255) tC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTgc > 4:308442/1‑149 (MQ=255) c‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTgcg > 1:574014/1‑149 (MQ=255) aaaaaaaaGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGt < 3:252091/104‑1 (MQ=255) aaaaaaaaGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTgcgc > 1:572378/1‑149 (MQ=255) aaaaaaaGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGcc > 4:710770/1‑149 (MQ=255) aaaaaaGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCt > 2:199552/1‑149 (MQ=255) tttgCCCCCTTCGCA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTgc > 3:311887/4‑149 (MQ=255) tttgCCCCCTTCGCA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTgc > 2:199377/4‑149 (MQ=255) aaaGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTgc < 3:396492/149‑1 (MQ=255) aGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGt > 1:384381/1‑127 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATcc < 1:871896/72‑1 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATcc > 2:871896/1‑72 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGTCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCTTc > 3:1709/1‑149 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATc > 4:860532/1‑149 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATc > 4:38418/1‑149 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATc > 1:416409/1‑149 (MQ=255) ccccTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATc > 2:314906/1‑149 (MQ=255) atGCGAA‑GGGGGCAAAGCATACTATGGCAATGTTTCGTTGGTTATACCTAGTGCTAGCGATAAACATCCGCGCTGGAGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCATAACTACGTGGTAGTACGTTGCGCCTTGCGCATCTGt < 2:640625/148‑1 (MQ=255) aa‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttctt > 1:232101/1‑149 (MQ=255) aa‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGAT‑AATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttcttc < 4:59089/149‑1 (MQ=255) | CTTCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTC‑AAAAAAAAGCCCCCTGCGAA‑GGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTC > NC_000913/4424323‑4424617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |