| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,600,156 | C→T | 5.1% | A12T (GCC→ACC) | yjjA ← | putative DUF2501 family periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,600,156 | 0 | C | T | 5.1% | 329.5 / 5.5 | 100 | A12T (GCC→ACC) | yjjA | putative DUF2501 family periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base C (37/57); new base T (2/3); total (40/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
AGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTA > NC_000913/4600011‑4600304 | aGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGgcaca > 1:772635/1‑149 (MQ=255)aGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGgcaca < 3:368273/149‑1 (MQ=255) agttagttAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGgcacagcac > 3:321804/1‑149 (MQ=255) ttagttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGTGCTGGCGGCAATGGcacagcaca‑g > 1:333270/1‑149 (MQ=255) ttagttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGcacagcaca‑g > 1:640576/1‑149 (MQ=255) agttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACa‑gaa < 2:726702/149‑1 (MQ=255) agttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACa‑gaa < 2:443700/149‑1 (MQ=255) agttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACa‑gaa < 3:61652/149‑1 (MQ=255) gttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACa‑gaag > 2:20678/1‑149 (MQ=255) ttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACa‑gaaga < 2:419492/149‑1 (MQ=255) ttaATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACa‑gaaga > 2:480910/1‑149 (MQ=255) taATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGAt < 4:697082/149‑1 (MQ=255) aTGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGt < 3:639896/149‑1 (MQ=255) tGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGtt < 3:525678/149‑1 (MQ=255) cgcgAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTaa < 2:763484/149‑1 (MQ=255) gcgagcgaCCAGCCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAAc > 2:246105/1‑149 (MQ=255) agctaCCATCCGCCTGCCTGTGTCGTGCTGTTTTTGTTGCCAAGTTCGCTGGCGGCGCTGGATAGCGCATCTTTCCAGGACGCAGCATGAACCCCGATGTAAATTAATTCGCTGGCGGCAACGGCACCGCACA‑GAAGATGTTTAACAGt < 4:235174/149‑1 (MQ=255) ccAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtca < 4:1687/149‑1 (MQ=255) ccAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtca < 1:87531/149‑1 (MQ=255) cAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtcat < 4:222546/149‑1 (MQ=255) cAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtcat < 4:835220/149‑1 (MQ=255) aaCCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtcatc > 2:687298/1‑149 (MQ=255) cGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtcatcatc > 1:179486/1‑149 (MQ=255) cGCCTTCCTGTGTCGTGCTGTTTTGGTTG‑CAAATTCGGTGGGGGCCCTGGAAAAGAGATTTTTCCCGGGCGCAACATGGACCCCGGGGGGAATTAATGGGCTTGGGGGCATGGGACAGCACAGGAGGATTTTTAAAGGTTttc‑tcatca > 1:786476/1‑149 (MQ=255) gCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTtcatcatca > 3:667506/1‑149 (MQ=255) ccTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTaa < 1:142706/133‑1 (MQ=255) ccTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTaa > 2:142706/1‑133 (MQ=255) tCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTAc < 3:682768/149‑1 (MQ=255) tgtgTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCa < 1:302520/149‑1 (MQ=255) tgtgTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCa < 3:347759/149‑1 (MQ=255) tgtCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTCGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAg < 2:93041/149‑1 (MQ=255) tGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAGATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGa > 2:428348/1‑149 (MQ=255) tGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGa > 4:641803/1‑149 (MQ=255) gCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGaa < 4:667506/149‑1 (MQ=255) tGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGTCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAAtt < 1:731295/149‑1 (MQ=255) tGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAAtt > 3:674528/1‑149 (MQ=255) tGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAAtt > 3:666096/1‑149 (MQ=255) ttttGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATtgt < 4:215040/149‑1 (MQ=255) ttttGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATtgt > 1:8976/1‑149 (MQ=255) ttGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTgtgt < 1:373004/149‑1 (MQ=255) ttGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGTACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCa < 3:730668/149‑1 (MQ=255) ttGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCa > 1:139993/1‑149 (MQ=255) gCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGt > 1:95819/1‑149 (MQ=255) gCCAAGTTCGCTGGCGGCGCTGGAGAGCGCAGCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGt > 4:539913/1‑149 (MQ=255) cAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGtat > 2:540588/1‑149 (MQ=255) cAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGtat > 2:735944/1‑149 (MQ=255) aaGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTgtgt < 4:317390/140‑1 (MQ=255) aaGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTgtgt > 3:317390/1‑140 (MQ=255) cGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGcc < 2:8976/149‑1 (MQ=255) gCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCa < 4:350360/149‑1 (MQ=255) gCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCa < 1:873852/149‑1 (MQ=255) tGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGa > 2:760286/1‑149 (MQ=255) gcgcTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACgg < 4:834421/149‑1 (MQ=255) gcgcTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACgg < 3:46631/149‑1 (MQ=255) cgcTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACggg < 3:837259/149‑1 (MQ=255) cTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGa > 3:233784/1‑149 (MQ=255) tGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGAt < 3:627608/149‑1 (MQ=255) agagCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTaa < 1:592911/149‑1 (MQ=255) agCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATa < 2:689590/149‑1 (MQ=255) gcgcATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATAc > 1:782064/1‑149 (MQ=255) gcATCTTTCCAGGACGCAGCCTGCACCCCGGTGGCAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACCCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATActc < 4:685985/149‑1 (MQ=255) aTCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACgg < 3:62791/135‑1 (MQ=255) aTCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACgg > 4:62791/1‑135 (MQ=255) aTCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCtt < 3:627704/149‑1 (MQ=255) aTCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCtt < 4:666096/149‑1 (MQ=255) aTCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCtt > 4:254087/1‑149 (MQ=255) tttCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTAc > 1:3819/1‑149 (MQ=255) tttCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTAc > 4:31401/1‑149 (MQ=255) tttCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTAc > 4:113762/1‑149 (MQ=255) tttCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTAc > 4:38727/1‑149 (MQ=255) tCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCt < 3:38727/149‑1 (MQ=255) aGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGTACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATAc > 4:565399/1‑137 (MQ=255) aGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGTACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATAc < 1:497968/137‑1 (MQ=255) aGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGTACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATAc > 2:497968/1‑137 (MQ=255) aGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGTACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATAc < 3:565399/137‑1 (MQ=255) agcaTGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGc < 1:735944/149‑1 (MQ=255) caTGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTa < 1:511238/149‑1 (MQ=255) aTGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGgca > 2:640699/1‑40 (MQ=255) aTGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGgca < 1:640699/40‑1 (MQ=255) aCCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCATAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTa < 3:539913/149‑1 (MQ=255) aCCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTa > 3:444025/1‑149 (MQ=255) tGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGGTGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACggg > 4:509344/1‑107 (MQ=255) tGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACggg < 3:509344/107‑1 (MQ=255) tGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATcc < 2:516417/149‑1 (MQ=255) gAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCa > 4:767238/1‑149 (MQ=255) aaTTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGTAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGt > 1:306915/1‑149 (MQ=255) aTTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGTAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGtt < 2:306915/149‑1 (MQ=255) aTTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGtt > 4:268401/1‑149 (MQ=255) aaTGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGaa < 4:799357/149‑1 (MQ=255) aTGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAg < 1:333407/149‑1 (MQ=255) aTGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAg < 4:674528/149‑1 (MQ=255) gcgcTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGAt > 2:20379/1‑149 (MQ=255) gcTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCa < 2:870046/149‑1 (MQ=255) cTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCAc < 2:744155/149‑1 (MQ=255) cTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCAc > 3:219833/1‑149 (MQ=255) aaTGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAAc < 2:179486/149‑1 (MQ=255) ggCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTGCTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGt < 3:90847/149‑1 (MQ=255) gcacagcaca‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGtt < 1:246105/149‑1 (MQ=255) cacagcaca‑gAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTa < 4:554209/149‑1 (MQ=255) cacagcaca‑gAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTa < 4:852030/149‑1 (MQ=255) | AGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACA‑GAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTA > NC_000913/4600011‑4600304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |