| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3484544 = | 223 (0.930) | 8 (0.030) | 6/496 | 16.7 | 3.5% | coding (55/870 nt) | prkB | putative phosphoribulokinase |
| ? | NC_000913 | = 3484540 | 222 (0.960) | coding (51/870 nt) | prkB | putative phosphoribulokinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATGTCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3484830‑3484544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtg‑g‑‑tC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACAAAGCTTTCAATTAAA < NC_000913/3484540‑3484262 AATGGCCCCTGTACCTGAGTCCACGGTACGGCTTCGTCATGGGTATTCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCTTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGG < 4:692840/280‑1 attgCCCCGGTACCTGATTCCACGGGACGGGTTCGTCTTAGGTAATCAGATATTGGCGAGAATTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTGTGTTCAAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCGTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGT < 4:597895/276‑1 TCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCCGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCT > 1:500214/1‑274 TCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCT < 1:840369/274‑1 CCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGT > 2:943197/1‑279 GTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCATTCTACCTCACCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGTCTGGTGGT > 1:502209/1‑274 TCGTAGGTATGCAGATATTTCCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAACGAAGGTTTGTTCAAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATTTCCCTTTCCGGGCGGGGGTAACGGTTAAAACTGTAGCCTTCCACCTCAGCTGCTTGCCGCTTTACTTTCGCGAATTCTTTACGAAATGCGAGGCTCGTGTGC‑G‑‑TCACCCGCG‑CGCTGGACCCTGTT > 3:280281/1‑273 ATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCGCGGGGCCGAAGCAGCTGATACGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGACAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTAT < 1:442348/275‑1 TGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑TC‑CCCGCGCCGCTGGATCCTGTTACCCCAATGACCGGAAGTTTTGCCGACATCGTAACTCCATGACTTAGCTATCATTGTTATCTCGTCCGac > 4:771639/1‑278 cTGCGGCCCGGCGTCGCGCGCTTTGCCGATTGCCATGTCCATTTCCGGGCGAGTGTAACGGTGAAAACTGTCGCCTTCCGCTTCGGCTGCATCCTGATTTACCTGCGAGAATCTTTCTCGAAACGCGAGGCTGGTGGTGTGCTTC‑CCCGCGCCGCTAGATCCTGTTACCGCAATGACCGGATGTTTGTCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGGCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCA < 3:388728/273‑1 GCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTAGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGAAAATATTTTGCGAAACGCGAGGCTGGTGGTG‑G‑‑TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATAC < 1:280281/274‑1 AGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCG > 3:153131/1‑143 GCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCG < 1:153131/143‑1 CGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCG < 2:771639/280‑1 gccttgtgggtgttG‑‑TC‑CCCGCGCCGCTGGCTCCTGTTACCGCAATGGCCGGATGTTTGGCAGACATAGTAACTCCATGACTTAACTATCATTATTATCGCGTCCGCCGGCGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACA < 2:812956/266‑1 GGTG‑G‑‑TC‑CACGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACAAAGCT < 1:624097/275‑1 TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTCACACAAAGCTTTCAA > 1:1365954/1‑275 TC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGAGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATAGGTGCCTTCACGTAACACAAAGCTTTCAATTAAc > 2:649582/1‑279 AATGTCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTG‑G‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3484830‑3484544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtg‑g‑‑tC‑CCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACAAAGCTTTCAATTAAA < NC_000913/3484540‑3484262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |