| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3884522 | 57 (0.880) | 5 (0.080) | 5/244 | NT | 8.6% | coding (30/360 nt) | rnpA | protein C5 component of RNase P |
| ? | NC_000913 | = 3884529 | 53 (0.870) | coding (37/360 nt) | rnpA | protein C5 component of RNase P | |||||
AGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3884367‑3884522‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagttaACAAGCG‑TAACTCCCTGGGAAATGCGAGCTTAACCACTCAGGGGTTAGCTTTATTACTTAGAAACGGTCAGACGAGCGCGGCCTTTAGCACGACGACGTGCCAGAACCTGACGACCATTTTTAGTAGCCATACGAGCACGGAAGCCGT < NC_000913/3884529‑3884382 AGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAG < 1:25194/149‑1AGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGATACTAAAAATGGTCGTCAGGTTATGGTACGTCTTCGTGCTAAATGCCGCGCTCGTCCGACCGTTTCTAAGTAATAAAGCTAAGCCCTGAGCGGTTAAGCTCGCATTTCCCAG < 4:491408/149‑1 CCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTAACAAGCG‑TAACTCCC < 1:575052/149‑1 AAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTT > 3:429368/1‑113 AAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTT < 4:429368/113‑1 TTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTAACAAGCG‑TAACTCCCTGG < 3:308706/117‑1 TTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTAACAAGCG‑TAACTCCCTGG > 4:308706/1‑117 GCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTAACAAGCG‑TAACTCCCTGGGAAATGCGA > 4:132325/1‑97 TCGCATTTCCCAGGGAGTT‑ACGCTTGTTAACTCCCTGGGAAATGCGAGCTTAACCACTCAGGGGTTAGCTTTATTACTTAGAAACGGTCAGACGAGC > 3:132325/1‑97 GTTAACAAGCG‑TAACTCCCTGGGAAATGCGAGCTTAACCACTCAGGGGTTAGCTTCATTACTTAGAAACGGTCAGACGAGCGCGGCCTTTAGCACGACGACGTGCCAGAACCTGACGACCATTTTTAGTAGCCATACGAGCACGGAAGC > 1:520738/1‑149 TTAACAAGCG‑TAACTCCCTGGGAAATGCGAGCTTAACCACTCAGGGGTTAGCTTTATTACTTAGAAACGGTCAGACGAGCGCGGCCTTTAGCACGACGACGTGCCAGAACCTGACGACCATTTTTAGTAGCCATACGAGCACGGAAGCC > 1:135275/1‑149 AACAAGCG‑TAACTCCCTGGGAAATGCGAGCTTAACCACTCAGGGGTTAGCTTTATTACTTAGAAACGGTCAGACGAGCGCGGCCTTTAGCACGACGACGTGCCAGAACCTGACGACCATTTTTAGTAGCCATACGAGCACGGAAGCCGT > 1:569076/1‑149 AGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3884367‑3884522‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagttaACAAGCG‑TAACTCCCTGGGAAATGCGAGCTTAACCACTCAGGGGTTAGCTTTATTACTTAGAAACGGTCAGACGAGCGCGGCCTTTAGCACGACGACGTGCCAGAACCTGACGACCATTTTTAGTAGCCATACGAGCACGGAAGCCGT < NC_000913/3884529‑3884382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |