New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16708747 (0.720)3 (0.050) 3/252 NT 5.2% coding (2358/2535 nt) mrcB fused glycosyl transferase and transpeptidase
?NC_000913 = 167110 64 (1.020)coding (2381/2535 nt) mrcB fused glycosyl transferase and transpeptidase

GTTATCTGGCTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTA  >  NC_000913/166963‑167256
                                                                                                                                                    |                                                                                                                                                  
gTTATCTGGCTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGc                                                                                                                                                   >  1:52788‑M2/1‑148 (MQ=255)
gTTATCTGGCTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGc                                                                                                                                                   >  4:535059‑M2/1‑148 (MQ=255)
         cTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGc                                                                                                                                          <  1:207067/149‑1 (MQ=255)
               aGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATg                                                                                                                                    >  3:258361/1‑149 (MQ=255)
               aGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATg                                                                                                                                    >  3:36514/1‑149 (MQ=255)
                   gCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATgcagc                                                                                                                                <  1:118714/149‑1 (MQ=255)
                      aaCGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGCACAGCGATT‑GCGGATCGCTGGTccagaccggcaagatac                                                                                                                                   <  2:492627‑M2/143‑18 (MQ=255)
                      aaCGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATgcagcagc                                                                                                                             >  2:270892/1‑149 (MQ=255)
                            gcTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGt                                                                                                                       >  4:495126/1‑149 (MQ=255)
                               gAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAg                                                                                                                    <  2:495620/149‑1 (MQ=255)
                                  tCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCa                                                                                                                 >  1:127423/1‑149 (MQ=255)
                                      gTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATcc                                                                                                             <  4:89720/149‑1 (MQ=255)
                                      gTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATcc                                                                                                             >  3:158692/1‑149 (MQ=255)
                                          cGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGttt                                                                                                         <  1:21924/149‑1 (MQ=255)
                                          cGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGttt                                                                                                         <  4:393363/149‑1 (MQ=255)
                                          cGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGttt                                                                                                         <  1:402068/149‑1 (MQ=255)
                                          cGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGttt                                                                                                         <  3:123436/149‑1 (MQ=255)
                                               gaagaTATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATgcagcagca                                                                                                                            >  1:12002/1‑125 (MQ=255)
                                               gaagaTATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATgcagcagca                                                                                                                            <  2:12002/125‑1 (MQ=255)
                                                  gaTATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGtc                                                                                                 >  3:407233/1‑149 (MQ=255)
                                                      ttGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGtcttct                                                                                             >  1:66331/1‑149 (MQ=255)
                                                        gCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCa                                                                                           >  2:427100/1‑149 (MQ=255)
                                                                      ggACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGc                                                                             >  1:357055/1‑149 (MQ=255)
                                                                       gACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGcc                                                                            <  2:362880/149‑1 (MQ=255)
                                                                          tACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCa                                                                         >  1:46165/1‑149 (MQ=255)
                                                                          tACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCACCCGCAGCAACAGCCGCa                                                                         >  3:354688/1‑149 (MQ=255)
                                                                             gacgGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACa                                                                      >  4:562146/1‑149 (MQ=255)
                                                                                  cAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAAc                                                                 <  1:186096/149‑1 (MQ=255)
                                                                                   aaCTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAAcc                                                                >  3:112057/1‑149 (MQ=255)
                                                                                     cTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTg                                                              >  4:188599/1‑149 (MQ=255)
                                                                                      tttgtttgCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGc                                                             >  2:439732/1‑149 (MQ=255)
                                                                                      tttgtttgCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGc                                                             >  2:574493/1‑149 (MQ=255)
                                                                                         gtttgCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCa                                                          <  2:596958/149‑1 (MQ=255)
                                                                                             gCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCaa                                                      >  4:374822/1‑149 (MQ=255)
                                                                                               aGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAaga                                                    <  2:357055/149‑1 (MQ=255)
                                                                                               aGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAaga                                                    <  2:521124/149‑1 (MQ=255)
                                                                                                gCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAagag                                                   <  4:207636/149‑1 (MQ=255)
                                                                                                  ggTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCa                                                 <  1:413943/149‑1 (MQ=255)
                                                                                                  ggTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCa                                                 <  4:354688/149‑1 (MQ=255)
                                                                                                        aTGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGa                                           >  1:534609/1‑149 (MQ=255)
                                                                                                        aTGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGa                                           >  1:145554/1‑149 (MQ=255)
                                                                                                          gCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGttt                                                                                                         <  3:290043/85‑1 (MQ=255)
                                                                                                          gCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGttt                                                                                                         >  4:290043/1‑85 (MQ=255)
                                                                                                          gCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACa                                         >  1:318067/1‑149 (MQ=255)
                                                                                                            gTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGc                                       <  4:83823/149‑1 (MQ=255)
                                                                                                            gTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGc                                       >  2:470603/1‑149 (MQ=255)
                                                                                                            gTATCTTGCCGGTCTGGACCAGAGATCCGCA‑ATCGCTGTGccagaccggcaagatacgcatgccaccgctgcaaacaaagttgccgtcgtagtccacgcccatatctgcaatatcttctggcggaacaagattcagcggcgtt                                             <  1:492627‑M2/143‑104 (MQ=255)
                                                                                                                cTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAg                                                                                                                    >  3:492781/1‑68 (MQ=255)
                                                                                                                cTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAg                                                                                                                    <  4:492781/68‑1 (MQ=255)
                                                                                                                        tCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGcc                           >  4:357569/1‑149 (MQ=255)
                                                                                                                          tGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCgg                         <  2:471193/149‑1 (MQ=255)
                                                                                                                            gACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGtt                       <  2:46165/149‑1 (MQ=255)
                                                                                                                            gACCAGCGATCAGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGtt                       >  3:378738/1‑149 (MQ=255)
                                                                                                                             aCCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTg                      <  1:574493/149‑1 (MQ=255)
                                                                                                                             aCCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTg                      <  1:439732/149‑1 (MQ=255)
                                                                                                                              ccAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTgg                     >  2:202436/1‑149 (MQ=255)
                                                                                                                              ccAGCGATCCGCA‑ATCGCTGGTccagaccggcaagatacgcatgccaccgctgcaaacaaagttgccgtcgtagtccacgcccatatctgcaatatcttctggcggaacaagattcagcggcgttggcgtctggttagccagataacgc                     <  1:369163‑M2/149‑128 (MQ=255)
                                                                                                                              acAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTgg                     >  4:308968/2‑149 (MQ=255)
                                                                                                                               cAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGGCAGCGACGGTGTAGCCGTTTgca                    <  2:223931/149‑3 (MQ=255)
                                                                                                                                aGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACCGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGAt                   <  3:19005/149‑1 (MQ=255)
                                                                                                                                 gCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATc                  >  2:175276/1‑149 (MQ=255)
                                                                                                                                   gATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCaa                >  4:259410/1‑149 (MQ=255)
                                                                                                                                    aTCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAg               <  4:36514/149‑1 (MQ=255)
                                                                                                                                    aTCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAg               <  2:318067/149‑1 (MQ=255)
                                                                                                                                    aTCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAg               >  2:40219/1‑149 (MQ=255)
                                                                                                                                     tCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAgg              >  2:515912/1‑149 (MQ=255)
                                                                                                                                          a‑aTCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATg         >  4:129573/1‑149 (MQ=255)
                                                                                                                                             tCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGtt       <  3:562146/149‑1 (MQ=255)
                                                                                                                                              cGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGttt      <  1:443714/149‑1 (MQ=255)
                                                                                                                                                cTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTgg    <  3:166417/149‑1 (MQ=255)
                                                                                                                                                  gtgCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGgta  <  2:66331/149‑1 (MQ=255)
                                                                                                                                                  gtgCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGgta  <  3:305993/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GTTATCTGGCTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCA‑ATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTA  >  NC_000913/166963‑167256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.