BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	713121 =	95 (0.910)	5 (0.050)	5/250	NT	5.5%	coding (135/546 nt)	seqA	negative modulator of initiation of replication
*	?	NC_000913	713158 =	81 (0.800)	5 (0.050)	5/250	NT	5.5%	coding (172/546 nt)	seqA	negative modulator of initiation of replication

Only 100 of 109 total aligned reads displayed.

CACTGGATTAAGATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTATGCTGCT  >  NC_000913/712975‑713267

aacgcctgggcgtcaagagaatatagtgtagacaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcga                                                                                                                                                    <  2:301369‑M1/2‑1 (MQ=255)

aacgcctgggcgtcaagagaatatagtgtagacaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcga                                                                                                                                                    <  2:939245‑M1/2‑1 (MQ=255)

aacgcctgggcgtcaagagaatatagtgtagacaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcga                                                                                                                                                    >  1:62294‑M1/147‑148 (MQ=255)

  cgcctgggcgtcaagagaatatagtgtagacaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcgacga                                                                                                                                                 >  3:448870‑M1/145‑149 (MQ=255)

  cgcctgggcgtcaagagaatatagtgtagacaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcgacga                                                                                                                                                 >  4:62314‑M1/145‑149 (MQ=255)

   tgGATTAAGATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGaa                                                                                                                                                >  3:601553/1‑149 (MQ=255)

      aTTAAGATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag‑a                                                                                                                                            <  3:708456/149‑1 (MQ=255)

      aTTAAGATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag                                                                                                                                              <  1:392413/148‑1 (MQ=255)

       ttAAGATGAAAACGATTGAAGTTGATGGTGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAat‑ag                                                                                                                                           >  4:865354/1‑149 (MQ=255)

        tAAGATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag‑ag                                                                                                                                           >  2:617928/1‑148 (MQ=255)

            aTGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGaaa                                                                                                                                               <  1:144204/141‑1 (MQ=255)

            aTGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGaaa                                                                                                                                               >  2:144204/1‑141 (MQ=255)

            aTGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTc                                                                                                                                       >  2:426155/1‑148 (MQ=255)

             tGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTCCTCCGGTGACGAAAG‑AGGTTcgc                                                                                                                                     >  3:737626/1‑149 (MQ=255)

               aaaaCGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTcgcg                                                                                                                                    >  2:281504/1‑148 (MQ=255)

                 aaCGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTg                                                                                                                                 >  4:322474/1‑149 (MQ=255)

                        agtgtagacaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcGACGATAGCAGGTTCGCGTTGCGTCAc                                                                                                                           >  3:295106‑M1/123‑149 (MQ=255)

                           gTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGc                                                                                                                       >  4:699417/1‑149 (MQ=255)

                           gTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGc                                                                                                                       >  3:30371/1‑149 (MQ=255)

                           gTTGATGATGAACTCTACAGCTAGATTGTCAGCCACACTAAGCATATCGTCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGATAG‑AGGTTCGCGTTGCGTCACCTGc                                                                                                                       <  3:805666/149‑1 (MQ=255)

                            ttGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGc                                                                                                                       >  1:264982/1‑148 (MQ=255)

                            ttGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCt                                                                                                                      >  4:328208/1‑149 (MQ=255)

                             tgatgatgaACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCt                                                                                                                      <  2:554208/148‑1 (MQ=255)

                               acaacagcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcGACGATAGCAGGTTCGCGTTGCGTCACCTGCTAt                                                                                                                    >  3:150204‑M1/116‑149 (MQ=255)

                                    gaACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcga                                                                                                              >  4:207893/1‑149 (MQ=255)

                                     gcagcataaagcgattgaccgctcgcttttgctctgcgtattcatccgaaagcagaagttcacgcattgcgcgaaccttgtctttaatcgttttgaccggcttcgcttcGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcgaa                                                                                                             >  4:899270‑M1/110‑149 (MQ=255)

                                     aaCTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcgaa                                                                                                             <  3:502662/149‑1 (MQ=255)

                                      aCTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcgaag                                                                                                            >  3:245888/1‑149 (MQ=255)

                                      aCTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcgaag                                                                                                            <  3:423643/149‑1 (MQ=255)

                                          tACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcgaagcgaa                                                                                                        >  4:323576/1‑149 (MQ=255)

                                           aCAGTTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTcgaagcgaag                                                                                                       >  3:184291/1‑149 (MQ=255)

                                              gCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGcc                                                                                                     <  1:281504/148‑1 (MQ=255)

                                               cTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCgg                                                                                                   >  4:903045/1‑149 (MQ=255)

                                               cTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATCTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCgg                                                                                                   >  3:874885/1‑149 (MQ=255)

                                                   atTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCa                                                                                                >  2:576542/1‑148 (MQ=255)

                                                   atTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCa                                                                                                >  2:601807/1‑148 (MQ=255)

                                                       ccagccaCACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACg                                                                                           >  3:839464/1‑149 (MQ=255)

                                                         agccaCACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGa                                                                                          <  2:28133/148‑1 (MQ=255)

                                                          gccaCACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGAtt                                                                                        <  4:839464/149‑1 (MQ=255)

                                                             acacTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTaaa                                                                                     >  3:740919/1‑149 (MQ=255)

                                                             acacTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTaaa                                                                                     <  4:321664/149‑1 (MQ=255)

                                                             acacTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTaa                                                                                      >  2:469778/1‑148 (MQ=255)

                                                              cacTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAg                                                                                    <  4:327088/149‑1 (MQ=255)

                                                                cTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGAc                                                                                  >  3:93166/1‑149 (MQ=255)

                                                                 tAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACa                                                                                 >  4:605146/1‑149 (MQ=255)

                                                                  aaGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACa                                                                                 <  1:426155/148‑1 (MQ=255)

                                                                  aaGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACa                                                                                 <  2:625649/148‑1 (MQ=255)

                                                                  aaGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACa                                                                                 >  1:948498/1‑148 (MQ=255)

                                                                   aGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACaa                                                                                <  2:648473/148‑1 (MQ=255)

                                                                   aGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACaa                                                                                <  1:576542/148‑1 (MQ=255)

                                                                   aGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACaa                                                                                >  1:514452/1‑148 (MQ=255)

                                                                      atatCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGtt                                                                            >  3:621235/1‑149 (MQ=255)

                                                                                gagCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATg                                                                   <  2:934783/148‑1 (MQ=255)

                                                                                gagCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGc                                                                  <  3:714597/149‑1 (MQ=255)

                                                                                  gcgcATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGt                                                                <  4:30371/149‑1 (MQ=255)

                                                                                  gcgcATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGt                                                                <  3:388179/149‑1 (MQ=255)

                                                                                       tCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAAc                                                            >  1:865251/1‑148 (MQ=255)

                                                                                       tCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAAc                                                            >  2:138784/1‑148 (MQ=255)

                                                                                       tCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACt                                                           >  4:909727/1‑149 (MQ=255)

                                                                                         cGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTc                                                         >  3:272617/1‑149 (MQ=255)

                                                                                          gACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag‑ag                                                                                                                                           >  4:851794/1‑66 (MQ=255)

                                                                                          gACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag‑ag                                                                                                                                           <  3:851794/66‑1 (MQ=255)

                                                                                           aCATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCt                                                        >  2:113635/1‑148 (MQ=255)

                                                                                           aCATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCt                                                        >  2:469033/1‑148 (MQ=255)

                                                                                               tttACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag‑ag                                                                                                                                           >  3:246219/1‑61 (MQ=255)

                                                                                               tttACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAag‑ag                                                                                                                                           <  4:246219/61‑1 (MQ=255)

                                                                                               tttACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCtt                                                    >  1:836671/1‑148 (MQ=255)

                                                                                               tttACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCtt                                                    >  1:396167/1‑148 (MQ=255)

                                                                                                ttACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTc                                                  <  4:403265/149‑1 (MQ=255)

                                                                                                   cGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCgg                                                <  1:164833/148‑1 (MQ=255)

                                                                                                   cGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCAGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCgg                                                >  1:151574/1‑148 (MQ=255)

                                                                                                         aTGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATa                                         <  4:412513/149‑1 (MQ=255)

                                                                                                          tGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATa                                         <  1:385971/148‑1 (MQ=255)

                                                                                                            ttGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACaa                                                                                <  4:759543/107‑1 (MQ=255)

                                                                                                            ttGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACaa                                                                                >  3:759543/1‑107 (MQ=255)

                                                                                                             tGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGc                                      >  1:179256/1‑148 (MQ=255)

                                                                                                               aaaTTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCTCAATGCGTGAACTTCTGCTTTCGGATGAATACGCag                                    >  2:697837/1‑148 (MQ=255)

                                                                                                               aaaTTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCaga                                   <  4:184291/149‑1 (MQ=255)

                                                                                                               aaaTTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCag                                    <  1:517092/148‑1 (MQ=255)

                                                                                                                ccttgtctttaatcgttttgaccggcttcgcttcGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTa                                                                                                                     >  2:779117‑M1/35‑66 (MQ=255)

                                                                                                                ccttgtctttaatcgttttgaccggcttcgcttcGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTa                                                                                                                     <  1:779117‑M1/32‑1 (MQ=255)

                                                                                                                   tttCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATg                                                                   >  2:213823/1‑113 (MQ=255)

                                                                                                                   tttCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATg                                                                   <  1:213823/113‑1 (MQ=255)

                                                                                                                     tCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCaaaa                             <  3:328208/149‑1 (MQ=255)

                                                                                                                        gccgcATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGa                                                                                   <  4:261978/92‑1 (MQ=255)

                                                                                                                        gccgcATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGa                                                                                   >  3:261978/1‑92 (MQ=255)

                                                                                                                            cATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAagcgagcg                      <  4:235007/149‑1 (MQ=255)

                                                                                                                            cATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGACGAATACGCAGAGCAAaagcaagc                       <  1:823589/148‑1 (MQ=255)

                                                                                                                              tCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTcgcg                                                                        <  4:718558/97‑1 (MQ=255)

                                                                                                                               cacaGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCAGCTTCTATCGTCGAAGCGAAGCCGCTCAAAACGATTAAATGCAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATAGGCAGAGCCAAAGCGAGCGGt                    >  1:715475/1‑148 (MQ=255)

                                                                                                                                  aGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCaa                 <  2:162507/148‑1 (MQ=255)

                                                                                                                                     ctgctgCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCaaa                              >  2:346224/1‑132 (MQ=255)

                                                                                                                                     ctgctgCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCaaa                              <  1:346224/132‑1 (MQ=255)

                                                                                                                                      tgctgcTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGc             <  1:929244/148‑1 (MQ=255)

                                                                                                                                        ctgctCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCtt           <  2:514452/148‑1 (MQ=255)

                                                                                                                                           ctCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTAtg       >  3:494025/1‑149 (MQ=255)

                                                                                                                                            tCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTAtg       <  2:647701/148‑1 (MQ=255)

                                                                                                                                             ccGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTAtgc      >  1:811449/1‑148 (MQ=255)

                                                                                                                                               ggTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTAtgctgc   <  3:699417/149‑1 (MQ=255)

                                                                                                                                                gTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTATgctgct  <  4:272617/149‑1 (MQ=255)

CACTGGATTAAGATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAG‑AGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTATGCTGCT  >  NC_000913/712975‑713267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.