| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,519,228 | C→A | 6.8% | intergenic (+23/+29) | yfeD → / ← gltX | DUF1323 family putative DNA‑binding protein/glutamyl‑tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,519,228 | 0 | C | A | 6.8% | 354.6 / 11.3 | 103 | intergenic (+23/+29) | yfeD/gltX | DUF1323 family putative DNA‑binding protein/glutamyl‑tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base C (42/54); new base A (3/4); total (45/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TCGACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGCCCCGCACC > NC_000913/2519082‑2519373 | tCGACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCATGAAAAAGTCACGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTATCGATATTGACGAATCAG‑CATAAATAAAAAACGCCAGGATATTAtctc > 4:409488/1‑149 (MQ=255) gACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCt < 4:157168/149‑1 (MQ=255) aaaTCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGcc > 3:609714/1‑149 (MQ=255) aaaTCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGAGATAATATCCTGc < 1:255935/148‑1 (MQ=255) atcatcAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCg < 2:126974/148‑1 (MQ=255) tcatcaACGCGATAGATAATATGACCCACGTTGAGCCGGAAAAAGTCGCGCAATTTTTGAC‑ACCTGAAGGAATTCGCAATCTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGTGCTAATATCCTGCCGtt < 4:592029/149‑1 (MQ=255) tcatcaACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGtt < 3:5058/149‑1 (MQ=255) tcatcaACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGAGATAATATCCTGCCGtt < 4:130732/149‑1 (MQ=255) tgaaCCCGAAAGATAATCTGACAGACATTGAGCATGAAAACGTCGCGCCATTTTTGTC‑ACGTGAACGAATTCACAATTTCCT‑CGCCCGTCTCGATACTGACGAATCAG‑CATAAATAAAAAACGGCATGATACAGTCTCCTGCCGTTTAt < 4:212409/147‑1 (MQ=255) tcaACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTa > 2:889154/1‑148 (MQ=255) caACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTAt > 2:717475/1‑148 (MQ=255) caACGCGATACATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTAt > 1:718982/1‑148 (MQ=255) aCGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCt > 2:782345/1‑148 (MQ=255) aCGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCt > 2:338259/1‑148 (MQ=255) aCGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCt > 1:66125/1‑148 (MQ=255) gatagataATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTa < 3:175339/149‑1 (MQ=255) tagataATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGGTATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTac > 1:561616/1‑148 (MQ=255) ataataTGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACg < 1:648740/148‑1 (MQ=255) ataataTGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGc < 4:345450/149‑1 (MQ=255) atatGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTaa > 3:768953/1‑149 (MQ=255) atatGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTa > 1:708191/1‑148 (MQ=255) acagacaTTGAGCAGGAATAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTAc < 4:652191/148‑1 (MQ=255) acagacaTTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGTATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTAc > 3:652191/1‑148 (MQ=255) acagacaTTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTAc < 2:708191/148‑1 (MQ=255) agacaTTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTActg < 1:382486/148‑1 (MQ=255) gacaTTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTActgc > 1:848166/1‑148 (MQ=255) cagtGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGa < 3:578072/146‑1 (MQ=255) ttGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGAt > 2:618285/1‑148 (MQ=255) gCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTcg > 3:394612/1‑149 (MQ=255) aaaaaGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGtt < 1:245803/148‑1 (MQ=255) cccggcaTTTTTGGCAACGTGAAGGATTTCG‑AATTTCCTCCGCCCGTTTCAAATTTGA‑GAATTAGCCATAAA‑AAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATa < 4:914649/143‑1 (MQ=255) gcgcAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATaa > 4:433628/1‑149 (MQ=255) cgcAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATaa > 2:527943/1‑148 (MQ=255) tttGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAg < 1:377954/148‑1 (MQ=255) gTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCt < 4:609714/149‑1 (MQ=255) cGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTttg < 1:782345/148‑1 (MQ=255) tGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTttgtt > 2:168150/1‑148 (MQ=255) aaGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGa < 2:848166/148‑1 (MQ=255) aaGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGa < 2:510714/148‑1 (MQ=255) aGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTGTCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATGAAATCCAGCGCTTTGTTGAt < 2:66125/148‑1 (MQ=255) aGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGAt < 2:959731/148‑1 (MQ=255) aGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGAGTTCAGCAATAAAATCCAGCGCTTTGTTGAt > 2:845906/1‑148 (MQ=255) aaTTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACg < 1:8042/148‑1 (MQ=255) aaTTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACg < 2:219770/148‑1 (MQ=255) aaTTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGc < 3:149427/149‑1 (MQ=255) aTTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCt > 4:92170/1‑149 (MQ=255) ttCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTc > 4:514615/1‑149 (MQ=255) gCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGAt < 3:91889/149‑1 (MQ=255) cAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATa < 3:422691/149‑1 (MQ=255) aaTTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATa < 2:530291/148‑1 (MQ=255) aaTTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATa > 1:643089/1‑148 (MQ=255) ccT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCgg < 4:90849/149‑1 (MQ=255) ccT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCg < 1:845906/148‑1 (MQ=255) ccT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCCAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCg < 1:322327/148‑1 (MQ=255) cGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTc < 3:370129/149‑1 (MQ=255) gCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTc > 1:839689/1‑148 (MQ=255) ccGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCtt < 1:618285/148‑1 (MQ=255) ccGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTa > 3:267238/1‑149 (MQ=255) tcGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAAt > 3:203856/1‑149 (MQ=255) tcGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAAt > 3:80438/1‑149 (MQ=255) cGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAAt < 1:797097/148‑1 (MQ=255) atTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCg < 1:943744/148‑1 (MQ=255) ttGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTg > 3:843775/1‑149 (MQ=255) gACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGaa > 3:125614/1‑149 (MQ=255) gACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGa < 2:708428/148‑1 (MQ=255) aCGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAAc < 3:151110/149‑1 (MQ=255) aaTCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACgg < 1:527943/148‑1 (MQ=255) tCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTaa > 4:295506/1‑149 (MQ=255) cATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACAt > 1:116837/1‑148 (MQ=255) cATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATc < 4:171693/149‑1 (MQ=255) ataaataaAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCt > 4:402434/1‑123 (MQ=255) ataaataaAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCt < 3:402434/123‑1 (MQ=255) aataaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAAtt > 1:289030/1‑54 (MQ=255) aataaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAAtt < 2:289030/54‑1 (MQ=255) aataaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGt > 3:22713/1‑149 (MQ=255) ataaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTg < 4:445152/149‑1 (MQ=255) ataaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTg > 3:662461/1‑149 (MQ=255) taaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTg < 2:561616/148‑1 (MQ=255) taaaAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGc > 4:644611/1‑149 (MQ=255) aaaaaaCGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGc < 1:489461/148‑1 (MQ=255) taaaCGGCAGGAGATAATATCCTGCCGTTTATCTTTTTACACGCTAAGTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTATCAATTGCGTGAACGGTAACATCCAGTGCTg > 1:628303/2‑148 (MQ=255) aaaCGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGga < 4:22713/149‑1 (MQ=255) aaaCGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGga < 3:92170/149‑1 (MQ=255) aCGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCt < 1:738706/144‑1 (MQ=255) aCGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCt > 2:738706/1‑144 (MQ=255) aCGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGgaga < 4:80438/149‑1 (MQ=255) aCGGCAGGAGATAATATCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAAc < 4:319362/128‑1 (MQ=255) aCGGCAGGAGATAATATCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAAc > 3:319362/1‑128 (MQ=255) ggCAGGAGATAATATCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACt > 3:904296/1‑149 (MQ=255) ggATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGcc < 1:338259/148‑1 (MQ=255) gATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGccc > 2:47864/1‑148 (MQ=255) atatTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGt > 1:570037/1‑102 (MQ=255) atatTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGt < 2:570037/102‑1 (MQ=255) atatTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGcccc > 1:935403/1‑148 (MQ=255) tattatCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGCCCCg > 1:934762/1‑148 (MQ=255) atCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAAtt < 2:790193/107‑1 (MQ=255) atCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGCCCCGCAcc < 2:429515/148‑1 (MQ=255) atCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGCCCCGCAcc < 1:698606/148‑1 (MQ=255) tctcCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTc > 3:15673/1‑45 (MQ=255) tctcCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTc < 4:15673/45‑1 (MQ=255) | TCGACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTC‑ACGTGAAGGAATTCGCAATTTCCT‑CGCCCGTCTCGATATTGACGAATCAG‑CATAAATAAAAAACGGCAGGATATTATCTCCTGCCGTTTATCTTTTTACACGCTAATTACTGCTGATTTTCGCGTTCAGCAATAAAATCCAGCGCTTTGTTGATACGCTCGATACTGCGGGTCTTACCAATTGCGTGAACGGTAACATCCAGTGCTGGAGACTGCCCCGCACC > NC_000913/2519082‑2519373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |