| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,726,045 | C→A | 5.6% | intergenic (‑299/+24) | kgtP ← / ← rrfG | alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,726,045 | 0 | C | A | 5.6% | 318.3 / 2.7 | 92 | intergenic (‑299/+24) | kgtP/rrfG | alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon |
| Reads supporting (aligned to +/- strand): ref base C (43/42); new base A (2/3); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAA > NC_000913/2725898‑2726190 | gATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTc < 1:865682/148‑1 (MQ=255)gATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCa > 4:23167/1‑149 (MQ=255) tAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑gg < 3:931540/149‑1 (MQ=255) aaTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGa < 2:126144/148‑1 (MQ=255) aTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGAt < 1:844896/148‑1 (MQ=255) tttCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATgg > 4:868928/1‑149 (MQ=255) ttCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATgg < 1:393698/148‑1 (MQ=255) ttCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATgg > 2:550223/1‑148 (MQ=255) tCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGcc < 3:516252/149‑1 (MQ=255) cTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGAC‑GGATGGcc < 2:14998/148‑1 (MQ=255) tGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGAC‑GGATGGCCtt < 3:71729/149‑1 (MQ=255) tGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCtt < 3:724478/149‑1 (MQ=255) ggTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCC‑TGACGGATGGCCttt < 4:348647/149‑1 (MQ=38) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTc > 4:399622/1‑149 (MQ=255) tAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGAC‑GGATGGCCtttt < 1:809497/148‑2 (MQ=255) tAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCC‑TGACGGATGGCCtttt < 2:67017/148‑2 (MQ=38) aggaggACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCa > 3:905145/1‑149 (MQ=255) ggaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATaa > 1:315653/1‑148 (MQ=255) acGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTc < 3:163906/138‑1 (MQ=255) acGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTc > 4:163906/1‑138 (MQ=255) cGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGa > 1:448569/1‑148 (MQ=255) gTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATGTAGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGTATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATg > 4:793626/1‑149 (MQ=255) aTGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGc > 1:640766/1‑148 (MQ=255) aaGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGc > 3:65346/1‑149 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCa < 4:883322/149‑1 (MQ=255) gggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGt > 2:122787/1‑148 (MQ=255) cAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTcc < 2:448569/148‑1 (MQ=255) aaGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCt < 4:477811/149‑1 (MQ=255) aGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTa < 4:905145/149‑1 (MQ=255) tGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTAct > 1:143476/1‑148 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTc > 2:293210/1‑140 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTc < 1:293210/140‑1 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTAct > 1:784094/1‑146 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTAct < 2:784094/146‑1 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACtctc < 4:758292/149‑1 (MQ=255) aGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCAt < 3:18369/149‑1 (MQ=255) gCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg < 3:865425/149‑1 (MQ=255) ccGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg < 1:654985/148‑1 (MQ=255) ccGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg > 2:807211/1‑148 (MQ=255) cGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg < 4:64995/149‑1 (MQ=255) gTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc < 4:398639/149‑1 (MQ=255) gTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc > 3:746065/1‑149 (MQ=255) gCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcac > 4:102692/1‑149 (MQ=255) cTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca > 4:868907/1‑149 (MQ=255) tGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca > 2:135260/1‑148 (MQ=255) cTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAcc > 1:466627/1‑148 (MQ=255) cTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAcc > 1:233611/1‑148 (MQ=255) tGGCATATGTGGGAGTATAAGACGCGCATCGTCGCATCAGGCATTTTCTTCTGCGCCACTGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTTTCGCATGGGGAGACCCCACACTACCAt > 4:719709/1‑149 (MQ=255) tGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCAt > 4:247031/1‑149 (MQ=255) gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCt < 3:446783/105‑1 (MQ=255) gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCt > 4:446783/1‑105 (MQ=255) gggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTAc > 1:200701/1‑148 (MQ=255) gggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACg > 4:833769/1‑149 (MQ=255) ggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTc > 3:936567/1‑80 (MQ=255) ggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTc < 4:936567/80‑1 (MQ=255) taAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt < 1:655599/148‑1 (MQ=255) aaGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa > 3:100757/1‑149 (MQ=255) gACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCa > 1:595912/1‑74 (MQ=255) gACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCa < 2:595912/74‑1 (MQ=255) aCGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACt > 1:208397/1‑148 (MQ=255) aCGCGCAGCGTCGCATCAGGCATGTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACt > 1:823203/1‑148 (MQ=255) gcgcAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt < 4:772860/149‑1 (MQ=255) cgcAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATACAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt > 1:793553/1‑148 (MQ=255) cgcAGCGTCGCATCAGGCATTTTTTTCTGCACCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTg < 4:901080/149‑1 (MQ=255) cAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa < 2:793553/148‑1 (MQ=255) cGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc < 4:811325/149‑1 (MQ=255) cGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCgg > 2:168023/1‑148 (MQ=255) gCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGc < 2:200701/148‑1 (MQ=255) tCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg < 4:100757/149‑1 (MQ=255) gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc < 2:631810/138‑1 (MQ=255) gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc > 1:631810/1‑138 (MQ=255) gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTc > 4:178477/1‑149 (MQ=255) cATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTTTGAGTTCGGCATGGGGTc > 2:371415/1‑148 (MQ=255) aTTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAg < 3:532851/149‑1 (MQ=255) ttttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt < 4:388581/149‑1 (MQ=255) ttttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt < 3:571874/149‑1 (MQ=255) tttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt < 2:937245/148‑1 (MQ=255) ttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg < 2:143476/148‑1 (MQ=255) ttttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg < 1:135260/148‑1 (MQ=255) tttCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTggg < 3:178477/149‑1 (MQ=255) ccAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcg < 2:709463/148‑1 (MQ=255) aTGCAAAAAGGCCATCCGTCA‑AGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCgcgc > 1:570816/1‑148 (MQ=255) aaaaaGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACgg > 4:104239/1‑149 (MQ=255) gaaaGGCCATCCTGAC‑GGATGGCCTTTTTGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACgg > 3:511113/2‑149 (MQ=11) aaGGCCATCCTGAC‑GGATGGCCTTTC‑GCATAATTTGATGCTTGGGAATTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACTACCGCGCTACGgccg > 3:808017/1‑149 (MQ=14) ggCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgc > 1:465812/1‑148 (MQ=255) gCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa < 4:341814/149‑1 (MQ=255) ccATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa > 2:268794/1‑148 (MQ=255) ccATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAg < 4:509982/149‑1 (MQ=255) aTCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAgg > 2:814500/1‑148 (MQ=255) tCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgc > 1:950213/1‑140 (MQ=255) tCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgc < 2:950213/140‑1 (MQ=255) cGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCaaa < 3:102692/149‑1 (MQ=255) | GATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCA‑GGATGGCCTTTC‑GCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAA > NC_000913/2725898‑2726190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |