| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,608,695 | C→G | 8.0% | intergenic (+46/+56) | zntA → / ← tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,608,695 | 0 | C | G | 8.0% | 241.6 / 6.3 | 92 | intergenic (+46/+56) | zntA/tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base C (40/40); new base G (2/5); total (42/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAA > NC_000913/3608548‑3608842 | acGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCctct > 1:429278/1‑149 (MQ=255) cGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTg < 1:214172/149‑1 (MQ=255) tAGGGATGACCGGGTTGTGGCTGGCAGTGCAGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGgaga < 2:804158/149‑1 (MQ=255) aGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGagag < 1:765177/149‑1 (MQ=255) aGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGAAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGagag < 1:623139/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAgg < 3:638717/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:742232/149‑1 (MQ=255) ggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAggg > 4:399208/1‑149 (MQ=255) ggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAggg > 4:1007721/1‑149 (MQ=255) ggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAggg > 1:374568/1‑149 (MQ=255) gATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGt > 1:388584/1‑149 (MQ=255) gACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑g < 1:572187/149‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCTCCTCTGGGGAGAGGGTTA‑gg > 3:32236/1‑149 (MQ=255) ccGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑ggg > 3:705863/1‑149 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATAGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCGCTGGGGAGAGGGTTA‑GGGt < 4:890360/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgg < 4:736660/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgg < 1:883717/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgg < 3:780526/149‑1 (MQ=255) gtgGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgggg > 4:556300/1‑149 (MQ=255) gctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAgg > 1:480730/1‑132 (MQ=255) gctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:480730/132‑1 (MQ=255) tggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTATGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAg > 2:679203/1‑149 (MQ=255) gcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAggc > 4:709775/1‑149 (MQ=255) gcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAggc < 2:429278/149‑1 (MQ=255) cAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAggcg > 3:759769/1‑149 (MQ=255) cAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGCCCCCTCGCCCCTCGGGGGAGAGGGTTA‑GGGTGAGGGGAAAAggcg < 1:57548/149‑1 (MQ=255) ttccgatcGGGGGCGACGGTGCTGGAGACAGGAAATGCTTTAAGATTGTGGCGCAGGAGAAAA‑GGC‑AAACCGATCGAAACATTGAGCGC‑GACCGGCCCCCCCGCCCCTGTGGGGAGGGGGTTG‑GGGTGAGGGGAAAAGGCGGCATCGaa < 2:916748/142‑1 (MQ=255) gCAGATGGGGGGGGGCGGGTGCTGGTGACAGCAAATGCTTAAAGATTGTTGCGAAGGAGAAAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGCCCCCGCGCCCCTCGGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGaa < 1:432473/149‑1 (MQ=255) gCAGATGGGGGGGCGAGGGTGGGGGTGAAAGCAAATGCGTTAGGATGGTTGCGAAGGAAAAAA‑GGC‑AACCCGATCGAAACATTGAGCGC‑GATCGGCCCCCCCCCCCCTCGGGGGAGGGGTTTA‑GGGTGAGGGGAAAAGGCGGCATCGaa < 2:487056/149‑1 (MQ=255) gCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCTCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGaa < 4:32236/149‑1 (MQ=255) cggggggCGAGGGTGCTGGAGACAGAAATGGCGTTAGGATTGTGGCGCGGGAAATAA‑GGC‑AACCCGATGGCAAATTGGGGCGA‑GACGGGCCCCCCCGCCCCTGGGGGGAGGGGGTTG‑GGTAGGGGGGAAAAGGCGGCATCGAAGCCAAt < 2:96874/147‑1 (MQ=255) gggcgggTGCTGGTACAAGCGAATGCTTTAAGTTTGTTGCGCAGGAGATAA‑GGC‑AAACGGATCGCAACATTGGGCGC‑GATCGGCCCCCTCGCCCCTCTGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGccc < 2:927460/144‑1 (MQ=37) gCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGccc > 4:482368/1‑149 (MQ=255) gACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCt > 1:315881/1‑149 (MQ=255) cGGGGCTGGTGACAGGAAATGCGTTAAGATTGTTGGGGAGGAGATAA‑GGC‑AACCCGATCAAAAAATTGAGCGC‑GACCGGCCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTAt < 4:795563/149‑1 (MQ=37) gggggggACGGCAAATGGTTTAGGTTTGTTGGGAGGGAGAAAG‑GGA‑AAACGGAGCGAAACATTGAGCGC‑GATGGGCCCCCCCGCCCCTTGGGGGGGAGGGTTA‑GGGGGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 4:409650/143‑1 (MQ=255) tGACAGCAAATGCGTTAAGTTTGTGGCGCAGAAGATAA‑GGC‑AAACCGATCGCAACATGGAGCGC‑GACCGGCCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCt < 2:656265/149‑1 (MQ=38) ggaaaGCAAATGCTTTAAGATTTTGGCGCA‑GAGAAAAGGGC‑AACCCGATCGAAACATGGAGCGG‑GATGGGTCCCCTCGCCCCTTGGGGAAGAGGTTTA‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCt < 2:435172/145‑1 (MQ=255) gACAGCGAATGCGTTAAATTTGTGGCGGAGGAGATAA‑GAC‑AAACCGTTCGAAACTTTGAGCGC‑GCTCGGTCCCCGCGCCCCTGTGGGGAG‑GGGTTAGGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCtt < 3:378/149‑1 (MQ=255) gcAGCAAATGCTTTAAGGTGTTTGCCAAGGAGAAAG‑GGC‑AACCCAACCGCAACATGGA‑CGCGGGGCGGGCCGCTCGCCCCTCGGGGAAGAGGGTTG‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCttt < 3:363632/148‑1 (MQ=255) ggagagtGCTTTAAGGTTGTCGCGCAGGGGATAA‑GGA‑AAACGGATCGAAGCATAGAGCGT‑GACCGCCCCCCCCGCCCCTTTGGGGGGAGGGTGG‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTAc < 3:116238/143‑1 (MQ=255) gAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑gg > 1:975560/1‑93 (MQ=255) gAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑gg < 2:975560/93‑1 (MQ=255) gAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGATA‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCATTACGaa > 2:12391/1‑149 (MQ=255) cGTTAAGATTGTTGCGAAGGAGATAA‑GGA‑AAACGGATCGAAACATGGAGCGC‑GATCGGCCCCCTCCCCCCTCGGGGGAGGGGGTTA‑GGGGGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCaaa < 2:374568/149‑1 (MQ=255) gtaaggtttgttgCGCAGGAGAAAA‑GGC‑AAACCGATCGAAACATGGAGCGC‑GACCGGCCCCCCCGCCCCTCGGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAAt < 4:100273/142‑1 (MQ=38) gTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAAt > 3:100273/1‑149 (MQ=255) ttAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATa > 3:141048/1‑149 (MQ=255) ttAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATa > 3:405136/1‑149 (MQ=255) aaagttggttgCGAGGGAAATAA‑GAA‑AACCCCATGGAAAAATTGAGCGC‑GGCCGTCCCCCGCCCCCCTCGGGGGGGGGGGTTG‑GGTGGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATaa < 3:482368/142‑1 (MQ=255) aaaGTTTGTTGCGAAGGAAATAA‑GGC‑AAACCGATCGAAACTTTGGGCGC‑GCTCGCCCCCCCCCCCCCTCGGGGGAGAGGGTTA‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATaa < 3:399208/148‑1 (MQ=255) aaGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAAc > 3:374976/1‑149 (MQ=255) gATTGTTGGGGAGAAGAAAA‑GGC‑AAGCCAATCGAAACTTTGGCGGC‑AACCGGCCCCTGCGCCCTTCGGGGGAGGGGTTGG‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGa < 3:400000/149‑1 (MQ=255) gATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAGGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGa > 1:951434/1‑149 (MQ=255) gATTGTTGCGCAGGAAAAAA‑GGA‑AAACCGATCGAAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGa < 2:973549/149‑1 (MQ=38) gttgCGCAGGAAAAAA‑GCC‑AACCCGATCGAAACATGGAGCGC‑GATCGGCCCCCCCGCCCCTCTGGGGAGAGGGTTG‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAg < 2:55712/149‑1 (MQ=255) tggcgaAGGAGA‑AA‑GGCAAAACCGATCGAAACTTGGAGCGC‑GATCGACCCCCTCACCCGTCGGGGGGGGGGGTTA‑GGGTGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAgg < 1:512426/147‑1 (MQ=255) gcAGGAGAAAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGCCCCCCTCCCCCCTCTGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGt < 4:374976/149‑1 (MQ=39) aGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTcc > 1:13207/1‑149 (MQ=255) gaTAA‑GGC‑AACCGGATCGAAAAAGTGGGCGC‑GATCGGCCCCCCCGCCCCTCGGGGGAGGGGGTAG‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATcc < 4:363686/149‑1 (MQ=255) aTAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCg > 3:426260/1‑149 (MQ=255) gC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTctct > 1:458256/1‑149 (MQ=255) aaaCCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 3:825907/1‑149 (MQ=255) aaaCCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 4:442079/1‑149 (MQ=255) acccGATCGCAAAATTGGGCGG‑GCTCGCTCCCCCCGCCCCTGTGGGGAGGGGGTTG‑GGGGGAGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 3:403094/147‑1 (MQ=255) aCCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAg > 2:989065/1‑149 (MQ=255) ccGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc > 3:957668/1‑149 (MQ=255) cGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTACATCCGTCTCTTTAGCa > 4:883927/1‑149 (MQ=255) cgaaaCATTGGGCGG‑GATCGGTCCCCTCCCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa < 4:957668/146‑1 (MQ=255) cgaaaCATGGGGCGC‑GATCGGCCCCCTCGCCCCTCGGGGGAGAGGGTTA‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa < 4:836046/146‑1 (MQ=255) cAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGt > 2:376929/1‑149 (MQ=255) aTTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgt > 3:267262/1‑149 (MQ=255) aTTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgt > 2:287471/1‑149 (MQ=255) aGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTc > 2:442925/1‑149 (MQ=255) gccc‑gATCGGCCCCCCCGCCCCTCGGGGAGGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTcc < 1:679203/146‑1 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 2:675189/1‑149 (MQ=255) aTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa > 1:925116/1‑149 (MQ=255) aTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa > 3:29420/1‑149 (MQ=255) tCGGTCCCCTCGCCTGCTTGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg < 3:355003/149‑1 (MQ=255) tCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg > 2:313951/1‑149 (MQ=255) tCGGTCCCCCCCCCTCTCTGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg < 1:1005637/149‑1 (MQ=255) ggTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGt < 4:405136/149‑1 (MQ=255) ctaacccTCTCCCCAGAGGGGCGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg > 1:252319/5‑147 (MQ=255) ctaacccTCTCCCCAGAGGGGCGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGt > 1:412217/5‑149 (MQ=255) tCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTAc > 2:746202/1‑149 (MQ=255) cccGCCCCTTGGGGGGGAGGGTTA‑GGGAGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaaaa < 1:456443/147‑1 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaaaa > 2:532382/1‑149 (MQ=255) tCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAAc > 3:656539/1‑149 (MQ=255) gCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCt < 3:368138/72‑1 (MQ=255) gCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCt > 4:368138/1‑72 (MQ=255) ccccTGTGGGAGGAGGGATA‑GGTTGAGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 4:1022359/149‑1 (MQ=255) ccccTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 4:759769/149‑1 (MQ=255) ccccTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 3:86261/149‑1 (MQ=255) tctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGaa > 2:346342/1‑149 (MQ=255) | ACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA‑GGC‑AAACCGATCGCAACATTGAGCGC‑GATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAA > NC_000913/3608548‑3608842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |