| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 70,657:1 | +G | 5.3% | coding (271/879 nt) | araC → | ara regulon transcriptional activator; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 70,657 | 1 | . | G | 5.3% | 302.0 / 11.7 | 75 | coding (271/879 nt) | araC | ara regulon transcriptional activator; autorepressor |
| Reads supporting (aligned to +/- strand): ref base . (44/27); new base G (2/2); total (46/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.81e-01 | |||||||||||
GAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACG > NC_000913/70393‑70925 | ggaGCGGAAAATGAGCACCCGCTGCCGGGATACTCTTTTACAGCCCATCTTGTGGGGTGTTTAACGCCGATTGAGGCAAACGGTTATCTCGATTTTTTTATCGACCGACCGTTGGGAATGAAAGGTTATATGCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCa < 4:23783/273‑1 (MQ=255) tCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACttt > 4:232011/1‑274 (MQ=255) gctgcCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAATGG‑GTATCACCAGTGGGTTTACTTTCGTCcg > 4:171089/1‑275 (MQ=255) ctgcCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGACT‑G‑GTATCTCCAGTGGGTTTACTTTCGTCcgcg > 2:565704/1‑275 (MQ=255) ttCGTTTACCGCCCAGCTGGTGGCGGGTTTAAGGCCGATTGGGGGCAACGGTAATTTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGc < 4:565703/274‑1 (MQ=255) tttAACGCCCATTTGGTGGGGGGTTTAACGTCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAAGCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATg < 4:488716/274‑1 (MQ=255) ttACCGCCCATCTGGTGGCCGGTGTAACGCCGATTGAGGCCAACGGTTATCTCTATTTTTTGATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGaa < 4:389008/275‑1 (MQ=255) cATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTaa > 2:59001/1‑275 (MQ=255) tCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTNGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCAGCCTGAGGCTCGCGAAT‑GNGTGTC‑CCAGAGGGTTTATGTTCTTCNCCCCGCCT‑CCGGGCATGAAGGGCTTacccgtcc > 3:130241/1‑272 (MQ=255) gtggCGGGTTTAACGCCGATTGAGGCCCACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGTTCGCGAAT‑G‑GTATTCCCCGTGGGTTTACTTTCGTCCGAGCGCCT‑ACTGGCATGAGTGGCTTAACTGGcc > 2:562010/1‑275 (MQ=255) gCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCCGGGGGTGGTGAAAAATCAGGGACTAGAATTTTTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGATATTCATCACTACGGTCGTCATCCTGAGGCTCGCGCAT‑G‑GTATCACCAGTGGGTTTACTTTCGTTCGCGTGCCT‑CCTTGCATGCATGGCTTAACTTGCCGTCAatc > 1:8276/1‑278 (MQ=255) ttAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGc < 1:130241/278‑1 (MQ=255) aaCGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCCGGGGGAGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGTCCGGGTGCTCTTTCGATGTTCACGCCAGGAGAGATTCATCACGACGGTCGTCCTCCGGCGCCTCGCGAAT‑G‑GTATCACTAGTGAGTTTCCTTTCATCCGCGGCCCT‑CACGGCATGAAGGCCCTAACTTGCCATCactctt > 4:128352/1‑268 (MQ=255) gATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATCCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCggt > 1:90899/1‑271 (MQ=255) tGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTg > 2:98817/1‑275 (MQ=255) tataTTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCcgc > 2:477695/1‑169 (MQ=255) tataTTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCa > 2:153560/1‑275 (MQ=255) ttttCGCAATCTCACCATTCGCGGTCAGGGGGGGGTGAAAAAGCAGGGGCGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCaa < 4:59001/272‑1 (MQ=255) ttCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCgcgcgc < 4:477694/169‑1 (MQ=255) ctcAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCAt < 2:292155/275‑1 (MQ=255) cAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTa > 2:96069/1‑275 (MQ=255) cAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAAGGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCCTTTCAGCGACCTGTTTGGGCAAATCATTa > 2:445841/1‑275 (MQ=255) aaTCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATc > 4:115668/1‑136 (MQ=255) aaTCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCaa > 2:240726/1‑206 (MQ=255) aaTCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATCCGGGTTTCTTTCGACCGGATGCAGCGCACCACCCGCATTTCAGAGCCCCGTTTGGGCAAATCCTTaa > 4:135804/1‑275 (MQ=255) tcgccagtggagttCAGGGGGGGGTTAGAGCGCNGGGGGGAGAATTTGTCTGCGGCCCGNGTGATGTTTTGCTGTTCCCGCCAGGGGAGATTCATCACTACGGCCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGNTTTACTTTCGTCCGCGATCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGc < 3:132937/266‑1 (MQ=255) tcACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACg < 4:240725/206‑1 (MQ=255) tcACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATAGTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCa < 2:115668/136‑1 (MQ=255) aCCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCgg > 2:509158/1‑275 (MQ=255) aCCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACGGGCATGAATGACTTAAATGGCCGTCAATCTTTGCCAATAAGGGTTTCTTTAGCCCGGATGAAGGGCACCAGCCCAATTCAAGCGACCAGTTTGGGACAATCATGAAGCCCgg > 4:246759/1‑275 (MQ=255) ccATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCAAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCTCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGACgg > 2:678021/1‑274 (MQ=255) cATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTATGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGc > 2:592952/1‑275 (MQ=255) cATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGc < 4:98817/275‑1 (MQ=255) gttCAGGGGTGGGTGAAAAATCAGGGACTAGATTTGTTCTGCCGCCCTGGACACATTTTGCGTTTCCGGCCAGGAGGGATTCATCTCTATGGTCTTCATCCGGAGGCTCGCTAAT‑T‑GTATCACCAGTGGGTTTACTTTCGTCGGCGCGCTT‑ACTGCCATGAATGGCTTAACTAGCCGTTAATAGTTGCCAATACGGGTTCCTTTCGCCCGCATGATGCGCCCCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGa < 4:146384/273‑1 (MQ=255) ggggTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGgcg < 2:232012/275‑1 (MQ=255) ggggTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGCCAAg > 2:146385/1‑265 (MQ=255) tggtgAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTgg > 2:333930/1‑164 (MQ=255) gtgAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCAc > 2:36144/1‑111 (MQ=255) gtgAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGACGGGCGCTATTCGGAg > 1:165996/1‑279 (MQ=255) gtgAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTc > 2:77715/1‑275 (MQ=255) gAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTgg > 2:236945/1‑142 (MQ=255) gAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGt < 4:333929/164‑1 (MQ=255) aaaaTCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGt < 4:36144/111‑1 (MQ=255) aaaaTCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCgggg > 2:351432/1‑273 (MQ=255) aaTCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATg < 4:236944/142‑1 (MQ=255) tgtttccggACCGGGTGATATTTGGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAG‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGc < 4:509157/267‑1 (MQ=255) tGTCTGCCGACCGGGTGATATTTTGCGGTTCCCGCCAGGAGGGATTCATAACTACGGTCGTCATCCGGAGGCTAGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGc < 2:637605/275‑1 (MQ=255) tGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAATGG‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGc < 2:171090/272‑1 (MQ=255) gccgccCCGGTGTTATTTTGATTGTCCCTCCAGGAGGGTTTCGTCCCGACGGTCGTCATCCGTGGGCTGGCGAAT‑G‑GTATCACCAGTGGGTTTAGTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGa < 4:592951/274‑1 (MQ=255) gggcgggatgggtttttGGTGGTCCGGCCAGGTGGGGTTGTTCAAGACGGTGGTAGACCGGAGGCGTCAGAAT‑G‑GTGTGAGCAGGGGGGTGACTTGCAGCCG‑GGGCCTCACTGGCGTGGAGGTCTTAACTGGCCGTCACTCTTGGCCAATACGGGTTTCTTTCGCCCGGATTAAGCGCACCCGCCGCATTTCAGCGACCTGGTTGGGCAAATCATTAACGCCGTGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGc < 4:195304/261‑1 (MQ=255) gCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGNCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATNAACGCCGGGCAGGGGCAAGGGCGCTCTTCGGGGCGGGTGGTGATANANCTGCTGGGGCAATTGTTATTGCGGCGCATgg > 3:49218/1‑278 (MQ=255) ttCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCATCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCa > 1:115894/1‑206 (MQ=255) cccGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGGTAAATCCGCCTGAACAATTGTTACCGGGGCGCATGGaa > 4:594079/1‑274 (MQ=255) agggtggaTTCATCACTACCGTCTGACTCCGGGGGGTCGGGAAT‑T‑GTATTCCCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTa < 4:414435/269‑1 (MQ=255) gagagaTTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTaa > 2:572138/1‑274 (MQ=255) aTTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGGCCCAGCCGCATTTCAGCGACCTGTTTGGGCCAATCATTAACGCCGGGGAAGGGGACGGGCGCTATTCGGAACCGCTGGCACACAATCTCCTTGACCAATTGTTTCTGCGGCGCCAGGCAGCGGTTAACAAGTc > 4:509393/1‑275 (MQ=255) tcatcaCTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCCCCATCCGCATTTCAGCGACCTTTTTGGGCAATTCATTACCTCCGGGCACGGGTAAGGCCGCTATTCGGAGCTGCTGGCGTTAAATCTGTTGGAGCAATGGTTACTGCGGCGATTGGACTCGATTacacagcgcc > 4:334377/1‑266 (MQ=255) tcaCTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGGCAATACGGGTTTCTTTCGCCCGGACGAAGCGCACCAGCCGCATTTCATAGACCTGTTTGGGACAATCATTAACACCAGGCAAAGGGAAGGGCGCTATTCGGAGCTGCTAGCGATAAATCGTCTTGAGCAATGGGTACTGCGACTCATGGAAGCGAGTAAAGAATCggccc > 4:169722/1‑271 (MQ=255) tcaCTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTg < 4:629563/230‑1 (MQ=255) tcaCTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTg > 2:629564/1‑230 (MQ=255) cGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCTCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGACCAATTGTTACTGCCGCGCATGGAAGCGATTAACGGATCGCTCCATCCAc > 2:494726/1‑275 (MQ=255) cGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGAcc > 4:328339/1‑152 (MQ=255) tcgtcATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCCTGGAAGCGATTAACGAGTCGCTCCATCCCCCg > 2:565874/1‑274 (MQ=255) atgtcATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATAATTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCg < 2:509394/272‑1 (MQ=255) cgtcATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGtt < 2:328340/152‑1 (MQ=255) gtcATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTATTGCGGCGCATGGAAGCGCTTAACGAGTCGCTCCATCCACCGAt > 2:4655/1‑274 (MQ=255) tcATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCCGGCAAgg > 2:13997/1‑177 (MQ=255) aTCCGGAGGCTCGCGAATGG‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGa > 4:362671/1‑179 (MQ=255) aTCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCAGCCACCGATGGATAATc > 1:194955/1‑279 (MQ=255) ccGGATGCTCGCAAAT‑G‑GTATCACCGGTGCGTGTACTTTCGGCCGCGCGCCT‑ACTGGCATGAATGGCTTGACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGaa < 4:13997/177‑1 (MQ=255) ggAGGCTCGCGAATGG‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAggg < 2:362672/179‑1 (MQ=255) ggCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCTATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGCTTCGCTCCATCCACCGATGGATAATCggg > 2:277958/1‑275 (MQ=255) tCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGgc > 3:107087/1‑173 (MQ=255) tCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGgc < 1:107087/173‑1 (MQ=255) cgcgAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTAcg > 2:239357/1‑275 (MQ=255) | GAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAAT‑G‑GTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCT‑ACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACG > NC_000913/70393‑70925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |