| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,828,537 | A→T | 5.1% | intergenic (+21/‑84) | srlD → / → srlM | sorbitol‑6‑phosphate dehydrogenase/sorbitol=responsive srl operon transcriptional activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,828,537 | 0 | A | T | 5.1% | 544.4 / 13.5 | 157 | intergenic (+21/‑84) | srlD/srlM | sorbitol‑6‑phosphate dehydrogenase/sorbitol=responsive srl operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base A (84/65); new base T (3/5); total (87/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 162 total aligned reads displayed.
AAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTG > NC_000913/2828389‑2828685 | aaGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCGATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTaa < 2:448945/149‑1 (MQ=255)aaGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTaa < 4:1262389/149‑1 (MQ=255)aaGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTaa < 1:1486785/149‑1 (MQ=255) aGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCAGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑g < 4:618892/149‑1 (MQ=255) ccGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCCGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGAtc > 4:485594/1‑149 (MQ=255) gCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGAtctc > 3:326407/1‑149 (MQ=255) cTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCTTAAT‑GGATCTcc < 3:1268578/149‑1 (MQ=255) tCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCg > 1:1397201/1‑149 (MQ=255) cAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTTGATCACTGTCACCGGCGGTCAGGTGATGTTCTGAACAACAGCGGAGATCCATTAA‑GGATCTCCGt < 4:397871/149‑1 (MQ=255) aaaCGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCTTAAT‑GCATCTCCgct < 4:1195138/149‑3 (MQ=255) aaaCGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTg < 4:651015/149‑1 (MQ=255) aaaCGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTg < 2:933626/149‑1 (MQ=255) aaCGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTga < 1:1017993/149‑1 (MQ=255) aaCGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTga < 4:987518/149‑1 (MQ=255) aaCGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTga > 3:1364713/1‑149 (MQ=255) cgcgGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTgaga < 3:215103/149‑1 (MQ=255) cgGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACt < 2:364784/149‑1 (MQ=255) tATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAg > 1:828713/1‑143 (MQ=255) tCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGAc < 2:1374983/136‑1 (MQ=255) aaGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGAt < 3:1179681/149‑1 (MQ=255) aaGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGAt < 1:1305312/149‑1 (MQ=255) tgtgCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATgcgc < 1:1008728/149‑1 (MQ=255) tgCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTa > 3:1469387/1‑149 (MQ=255) gCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTAc > 3:1073421/1‑149 (MQ=255) gCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTAc > 3:1255297/1‑149 (MQ=255) cTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACg > 1:38303/1‑149 (MQ=255) tGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGc > 2:732641/1‑149 (MQ=255) tatGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcat < 3:397999/149‑1 (MQ=255) tgctgcTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcatca < 2:327463/149‑1 (MQ=255) gctgctGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAg < 2:12054/149‑1 (MQ=255) gctgctGTTCTACGCCAGTCCTAAGGCATCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAg > 3:991814/1‑149 (MQ=255) ctgctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAgg < 3:503720/149‑1 (MQ=255) tgctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑g < 3:622679/102‑1 (MQ=255) tgctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTga < 1:1395869/113‑1 (MQ=255) tgctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTga > 2:1395869/1‑113 (MQ=255) tgctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGc > 3:932083/1‑149 (MQ=255) tgctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGc > 2:969872/1‑149 (MQ=255) gctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCa > 2:586864/1‑149 (MQ=255) tgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcat < 1:1367209/141‑1 (MQ=255) ttCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACa < 4:1342592/149‑1 (MQ=255) gCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGa > 1:983647/1‑119 (MQ=255) cAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTcc < 2:861458/149‑1 (MQ=255) tCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGcc < 3:322542/149‑1 (MQ=255) ccTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCa < 4:932083/149‑1 (MQ=255) tAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCAGCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTGTAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACt > 3:1246153/1‑149 (MQ=255) tAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACt > 2:853959/1‑149 (MQ=255) tAAGGCGGCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACt > 1:1455318/1‑149 (MQ=255) gCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACAt > 2:1122794/1‑149 (MQ=255) gtcgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTa > 1:398385/1‑149 (MQ=255) gtcgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTa > 4:195746/1‑149 (MQ=255) gtcgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTa > 3:1256344/1‑149 (MQ=255) tcgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTaa < 3:1124192/149‑1 (MQ=255) tcgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTaa < 4:554649/149‑1 (MQ=255) tcgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTaa < 2:1100863/149‑1 (MQ=255) tcgtACTGCAACGGACAGTCGATCAATGTCACAGGCGGTCAGGTGAGTTTCTGATCAACAGCGGAGATCGATTAA‑GGATCTCAGTGAGACTATAGATTGCCTGATCCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTaa < 2:979263/149‑1 (MQ=255) cgtACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAg < 4:819070/149‑1 (MQ=255) tGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaaaa < 1:108195/149‑1 (MQ=255) tGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaaaa < 2:310852/149‑1 (MQ=255) ccGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGCCTTCCGCCACTACATTAAGGAAAAGTTa < 4:857052/149‑1 (MQ=255) gTCGAGCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGGTCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATc > 2:1350992/1‑149 (MQ=255) tCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATcc > 4:792298/1‑149 (MQ=255) gATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGc > 4:1166345/1‑149 (MQ=255) aTCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTCTGGTATCCGCa < 3:1166345/149‑1 (MQ=255) gTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACtcatc < 3:195746/149‑1 (MQ=255) cACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCAc > 3:1327790/1‑149 (MQ=255) aCCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGGTGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCAcc > 1:566922/1‑149 (MQ=255) aCCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATAc < 4:1097776/97‑1 (MQ=255) aCCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCAcc > 1:174996/1‑149 (MQ=255) cggcggTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGt < 1:1152641/149‑1 (MQ=255) cggTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGc < 2:1044993/149‑1 (MQ=255) gacAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGCCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATTGTATCCGCACTCATCACCGTCGcct > 4:981733/3‑148 (MQ=255) aGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTa < 4:326407/149‑1 (MQ=255) gTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATc < 2:174996/149‑1 (MQ=255) gTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATc > 1:862728/1‑149 (MQ=255) tGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTACCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTAtag > 4:1274217/1‑147 (MQ=255) aTGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGcc > 1:305607/1‑149 (MQ=255) tGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCt < 4:253788/149‑1 (MQ=255) gATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGtgtg > 1:1205978/1‑149 (MQ=255) aTCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCt > 4:123560/1‑49 (MQ=255) tCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTgcg > 3:1407554/1‑149 (MQ=255) aCAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTgc > 2:991335/1‑145 (MQ=255) aCAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTgc < 1:991335/145‑1 (MQ=255) aCAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCaa < 3:825090/149‑1 (MQ=255) tcacGGAGATCCTTAAT‑GGATCTCCGCGAGACTATAGAATGCCTGATGCGCTACGCTCATCAgg < 3:1068668/61‑1 (MQ=21) tcacGGAGATCCTTAAT‑GGATCTCCGCGAGACTATAGAATGCCTGATGCGCTACGCTCATCAgg > 4:1068668/4‑64 (MQ=21) cAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAAc < 1:632760/149‑1 (MQ=255) acGGAGATCCTTAAT‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaaaa < 1:700166/94‑1 (MQ=39) acGGAGATCCTTAAT‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaaaa > 2:700166/2‑95 (MQ=39) ggAGATCCTTAAT‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATGGCCTGGTGTGCGCAACTGGc > 1:880428/1‑149 (MQ=255) ggAGATCC‑TTAATGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGc > 1:710098/1‑149 (MQ=255) aTCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTa > 3:1462431/1‑149 (MQ=255) tCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACtc > 3:698557/1‑106 (MQ=255) tCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACtc < 4:698557/106‑1 (MQ=255) tCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGgtgt > 4:1433442/1‑133 (MQ=255) aTTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAggcg > 2:59963/1‑149 (MQ=255) aTTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAggcg > 2:269943/1‑149 (MQ=255) aTTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCCTTATCGCCTGGTGTGCGCAACTGGCCTTAggcg > 2:404617/1‑149 (MQ=255) ttAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAggcgg > 2:1162425/1‑149 (MQ=255) ttAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAggcgg < 1:140637/149‑1 (MQ=255) a‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTg > 3:1356071/1‑149 (MQ=255) | AAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAA‑GGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTG > NC_000913/2828389‑2828685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |