| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 949,741 | Δ1 bp | 5.6% | coding (74/591 nt) | ycaK → | putative NAD(P)H‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 949,741 | 0 | C | . | 5.6% | 375.9 / 15.8 | 107 | coding (74/591 nt) | ycaK | putative NAD(P)H‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (50/50); new base . (3/3); total (54/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTAT > NC_000913/949593‑949889 | tCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGc < 3:341081/149‑1 (MQ=255) ccTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCg > 2:485345/1‑149 (MQ=255) cTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGa > 2:88554/1‑149 (MQ=255) tGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGa < 2:275186/148‑1 (MQ=255) tGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGa > 1:275186/1‑148 (MQ=255) tGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGAt < 2:301973/149‑1 (MQ=255) atcaCGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCa > 4:268869/1‑149 (MQ=255) tcaCGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATTCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAg > 3:447001/1‑149 (MQ=255) tcaCGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAg > 2:336528/1‑149 (MQ=255) aCGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGATCTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCg < 1:203006/149‑1 (MQ=255) gTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATG‑GATCGCATCAGcaat < 1:597381/149‑4 (MQ=255) cAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATg < 1:501874/149‑1 (MQ=255) gATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAg > 4:378187/1‑149 (MQ=255) aTTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGc < 3:589250/149‑1 (MQ=255) aTTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGc < 1:485345/149‑1 (MQ=255) tATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCgg > 3:173039/1‑149 (MQ=255) cgccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAAt > 2:412642/1‑149 (MQ=255) cgccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAAt > 4:277760/1‑149 (MQ=255) cgccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAAt < 2:633250/149‑1 (MQ=255) cgccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGGATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAAt > 2:521910/1‑149 (MQ=255) gccTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATCGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATa > 4:656494/1‑149 (MQ=255) tGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAg < 4:148558/149‑1 (MQ=255) gCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAgg > 1:751699/1‑149 (MQ=255) aaaGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGAc < 4:185607/149‑1 (MQ=255) aaaGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGAc > 4:500866/1‑149 (MQ=255) aaGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGGATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACg < 1:521910/149‑1 (MQ=255) tGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGaa < 4:173039/149‑1 (MQ=255) tCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGa < 1:816413/149‑1 (MQ=255) ccAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGAt < 1:88554/149‑1 (MQ=255) gAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTta > 1:192430/1‑149 (MQ=255) aaCTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTtat < 1:353860/149‑1 (MQ=255) aCTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTtata < 2:753547/149‑1 (MQ=255) ttAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATc > 3:550511/1‑149 (MQ=255) aCGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGc < 3:378187/149‑1 (MQ=255) ggAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTaa < 2:293502/149‑1 (MQ=255) aGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAAtt < 1:412642/149‑1 (MQ=255) ggTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAAttt > 2:388304/1‑149 (MQ=255) gTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTc < 3:591145/149‑1 (MQ=255) aaaaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTtat > 2:313631/1‑133 (MQ=255) aaaaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTtat < 1:313631/133‑1 (MQ=255) aaaaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCaa < 2:192430/149‑1 (MQ=255) aaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCaa < 3:30682/147‑1 (MQ=255) aaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCaa < 3:66832/147‑1 (MQ=255) aaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCaa > 4:30682/1‑147 (MQ=255) aaTTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCaa > 4:66832/1‑147 (MQ=255) gCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGtga > 1:110625/1‑149 (MQ=255) aaCGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCg > 1:106009/1‑149 (MQ=255) gTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGaa > 1:276514/1‑149 (MQ=255) gTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGaa < 2:106009/149‑1 (MQ=255) gTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGaa > 2:1876/1‑149 (MQ=255) atttatttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGa > 3:193704/1‑149 (MQ=255) tttatttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGAt > 4:278712/1‑149 (MQ=255) tttatttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGAt < 1:738402/149‑1 (MQ=255) atttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGaa < 2:781309/149‑1 (MQ=255) tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATAc < 3:775693/86‑1 (MQ=255) tttGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAAc < 4:167483/149‑1 (MQ=255) tATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGAc > 1:445807/1‑149 (MQ=255) gCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGgaa < 1:810905/149‑1 (MQ=255) gCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGgaa < 2:110625/149‑1 (MQ=255) ccATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGAtt > 4:533174/1‑92 (MQ=255) aTCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAat < 3:500866/149‑1 (MQ=255) aTCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAat > 3:655744/1‑149 (MQ=255) ccTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAatat < 1:336528/149‑1 (MQ=255) cTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATg > 2:267330/1‑149 (MQ=255) cTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATg > 4:53220/1‑149 (MQ=255) cTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCAGAAGATGAACCAGACTGGAAGAATATg < 3:377479/149‑1 (MQ=255) tCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAata > 2:372629/1‑146 (MQ=255) tCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAata < 1:372629/146‑1 (MQ=255) tCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCACACTGGAAGAATATgg > 2:235584/1‑149 (MQ=255) cGTCATGATTCATTGACCGCACATATTGATGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGa < 4:193704/149‑1 (MQ=255) aTTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGcc < 3:158883/112‑1 (MQ=255) aTTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGAc < 1:271105/128‑1 (MQ=255) aTTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGAc > 2:271105/1‑128 (MQ=255) aTTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGt > 3:297094/1‑149 (MQ=255) tCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTa < 2:527611/149‑1 (MQ=255) aCCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAAt > 2:257986/1‑84 (MQ=255) aCCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAAt < 1:257986/84‑1 (MQ=255) gCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGaa < 3:391955/60‑1 (MQ=255) gCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGaa > 4:391955/1‑60 (MQ=255) gCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCCACCCAGTGATGACGCCGGAAGATGAAc < 3:533595/112‑1 (MQ=255) gCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAAc > 4:533595/1‑112 (MQ=255) gCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCaga > 1:693025/1‑149 (MQ=255) gCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCaga > 3:19361/1‑149 (MQ=255) tatatTGCTGATGTGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAGTTTCAACCCAGTGACGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGt > 4:517716/2‑149 (MQ=255) atatTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCTATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGtt > 2:619933/1‑149 (MQ=255) tatTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTtc < 2:751699/149‑1 (MQ=255) tatTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTtc < 3:304080/149‑1 (MQ=255) cccgCTGATG‑GATCGCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAatat > 4:146192/4‑122 (MQ=255) cccgCTGATG‑GATCGCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAatat < 3:146192/119‑1 (MQ=255) ttGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTtcat > 2:425822/1‑149 (MQ=255) ccgCTGATG‑GATCGCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGa > 4:194884/3‑58 (MQ=25) ccgCTGATG‑GATCGCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGa < 3:194884/56‑1 (MQ=25) ccgCTGATG‑GATCGCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTtcat > 1:620485/3‑149 (MQ=255) tGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGc < 2:586840/149‑1 (MQ=255) tGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGc > 4:638239/1‑149 (MQ=255) gATGCGATC‑CATTAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCt < 3:371758/149‑1 (MQ=255) gATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAAc < 2:28483/75‑1 (MQ=255) gATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAAc > 1:28483/1‑75 (MQ=255) gATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCt < 4:297094/149‑1 (MQ=255) cGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTAt < 3:638239/149‑1 (MQ=255) | TCCTGAATCATCACGTTTACAGGATTATGCCGCCTGCGTAAAGTGCGCTCCAGAACTTAACGTGGAGGTAAAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATC‑CATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTAT > NC_000913/949593‑949889 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |