New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3377767	70 (1.060)	5 (0.080)	5/250	NT	7.0%	intergenic (‑347/+48)	sspA/rpsI	stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9
	?	NC_000913	4189605 =	69 (1.130)					intergenic (+32/‑181)	rpoC/yjaZ	RNA polymerase, beta prime subunit/stationary phase growth adaptation protein

GGGGAAAAAGAGATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTAC  >  NC_000913/3377619‑3377912                                                                                                                                                      |                                                                                                                                                  ggggAAAAAGAGATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGC                                                                                                                                                   <  3:532268‑M1/149‑1 (MQ=255)    gAAAAAGAGATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGa                                                                                                                                                >  2:139517/1‑149 (MQ=255)       aaaGAGATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGc                                                                                                                                             <  3:179852/149‑1 (MQ=255)       aaaGAGATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGc                                                                                                                                             >  4:179852/1‑149 (MQ=255)          gagaTGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCttcggcggg                                                                                                                                          <  3:33409‑M1/149‑10 (MQ=255)          gagaTGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCggg                                                                                                                                          <  3:194582/149‑1 (MQ=255)             aTGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGTTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCttcggcgggttt                                                                                                                                       <  4:109720‑M1/149‑13 (MQ=255)                cgcTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGtttttt                                                                                                                                    <  1:161890/149‑1 (MQ=255)                  cTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCttcggcgggttttttta                                                                                                                                  <  4:4387‑M1/149‑18 (MQ=255)                      aGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGaaaa                                                                                                                              <  1:544460/149‑1 (MQ=255)                      aGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGaaaa                                                                                                                              <  3:336299/149‑1 (MQ=255)                        tCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAAtt                                                                                                                            >  2:486322/1‑149 (MQ=255)                          tGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTg                                                                                                                           >  2:327521/1‑149 (MQ=255)                          tGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGt                                                                                                                          <  1:181273/149‑1 (MQ=255)                           gAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGtt                                                                                                                         >  4:440120/1‑149 (MQ=255)                            aaaTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGttt                                                                                                                        >  3:506958/1‑149 (MQ=255)                            aaaTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGttt                                                                                                                        >  1:193175/1‑149 (MQ=255)                            aaaTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGttt                                                                                                                        >  3:37082/1‑149 (MQ=255)                             aaTAGTTGACTTAGTTCCTGATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGtttt                                                                                                                       >  2:551208/1‑149 (MQ=255)                              aTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTc                                                                                                                      <  4:390051/149‑1 (MQ=255)                                 gTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGc                                                                                                                   >  3:24611/1‑149 (MQ=255)                                   tGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCg                                                                                                                 <  4:523888/149‑1 (MQ=255)                                     aCTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGa                                                                                                               >  2:253584/1‑149 (MQ=255)                                     aCTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGa                                                                                                               <  1:486322/149‑1 (MQ=255)                                           tCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGaa                                                                                                         <  4:37082/149‑1 (MQ=255)                                           tCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGaa                                                                                                         <  1:252334/149‑1 (MQ=255)                                           tCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGaa                                                                                                         >  1:278325/1‑149 (MQ=255)                                           tCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGaa                                                                                                         <  4:506958/149‑1 (MQ=255)                                              cTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGcc                                                                                                      >  4:199625/1‑149 (MQ=255)                                              cTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGcc                                                                                                      >  2:354274/1‑149 (MQ=255)                                                  ttGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAAtt                                                                                                  <  2:183486/149‑1 (MQ=255)                                                    ggCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTaa                                                                                                <  1:132129/149‑1 (MQ=255)                                                         tgtgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGttt                                                                                           <  1:16161/149‑1 (MQ=255)                                                         tgtgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGttt                                                                                           <  2:334632/149‑1 (MQ=255)                                                          gtgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCACCTTTCCAGTTTTTACGCTGATTCAGATTTTAGCCAT‑AAAAAAACCCGCCTAAGCGGGTTTTTTCGAAAATTGTTTTCTGACGGAGCAGAAGCCAATTAACGTCTg                                                                                          <  4:352450/149‑1 (MQ=255)                                                          gtgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTg                                                                                          <  1:420941/149‑1 (MQ=255)                                                          gtgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTg                                                                                          <  3:362308/149‑1 (MQ=255)                                                            ggTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGga                                                                                        <  1:253584/149‑1 (MQ=255)                                                              tttttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGgaga                                                                                      >  2:36944/1‑149 (MQ=255)                                                              tttttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGgaga                                                                                      >  2:8405/1‑149 (MQ=255)                                                               ttttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGaa                                                                                     >  3:516059/1‑149 (MQ=255)                                                                    ttttACCTGTCTGTCAACGGGCAGCAAAAAGCAACGTTCCAGTTTTTACGCTGATTCAGTTTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCg                                                                                >  4:322999/1‑149 (MQ=255)                                                                       tACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGga                                                                              <  2:546836/149‑1 (MQ=255)                                                                        aCCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacg                                                                            >  3:115154/1‑149 (MQ=255)                                                                        aCCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacg                                                                            >  3:362989/1‑149 (MQ=255)                                                                          ctgtctgtCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgac                                                                          >  3:75731/1‑149 (MQ=255)                                                                                     gTGGCAGCAAAAAGCAAATTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAACAACCCGCCGAAGCGGGTATTTTCGAAAATTTTTTTCTGCCGGAGCAGAAGCCAATCAACGTTTGGAGAACTGCGGACGACGACGTGCTTTa                                                               <  1:210799/149‑1 (MQ=255)                                                                                      tGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGCAGAACTGCGGACGACGACGTGGTCTAc                                                              >  4:490050/1‑149 (MQ=255)                                                                                          agcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAg                                                          <  1:139517/149‑1 (MQ=255)                                                                                          agcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAg                                                          >  4:193885/1‑149 (MQ=255)                                                                                           gcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAg                                                                                                        >  3:149069/1‑102 (MQ=255)                                                                                           gcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAg                                                                                                        <  4:149069/102‑1 (MQ=255)                                                                                           gcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGa                                                         <  2:162803/149‑1 (MQ=255)                                                                                           gcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGa                                                         >  1:533555/1‑149 (MQ=255)                                                                                             aaaaaGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGttt                                                                                           >  3:183966/1‑113 (MQ=255)                                                                                             aaaaaGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGttt                                                                                           <  4:183966/113‑1 (MQ=255)                                                                                                    aaCTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTc                                                <  3:116368/149‑1 (MQ=255)                                                                                                    aaCTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTc                                                <  2:193175/149‑1 (MQ=255)                                                                                                       tttCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCttcggcgggttttt                                                                                                                                     <  3:276826‑M1/61‑15 (MQ=255)                                                                                                       tttCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCttcggcgggttttt                                                                                                                                     >  4:276826‑M1/1‑47 (MQ=255)                                                                                                        ttCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTAc                                            <  4:218354/149‑1 (MQ=255)                                                                                                          ccAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGt                                          <  2:209738/149‑1 (MQ=255)                                                                                                              tttttACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCaa                                      <  1:262474/149‑1 (MQ=255)                                                                                                               ttttACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAAc                                     <  4:516059/149‑1 (MQ=255)                                                                                                               ttttACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAAc                                     <  2:188674/149‑1 (MQ=255)                                                                                                                     gCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCACTTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACg                               >  2:250200/1‑149 (MQ=255)                                                                                                                        gATTCAGATTTTAGCTAT‑AAAACAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCTACCTGACGAGc                            <  3:320764/149‑1 (MQ=255)                                                                                                                         aTTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCg                           >  1:89622/1‑149 (MQ=255)                                                                                                                           tCAGATTTTAGATAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTACTTACGTTCAACCTGACGAGCGTc                         >  3:497992/1‑149 (MQ=255)                                                                                                                                   tAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTaa                 <  2:136796/149‑1 (MQ=255)                                                                                                                                   tAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTGCAACCTGACGAGCGTCACGAGTaa                 <  3:229207/149‑1 (MQ=255)                                                                                                                                       tat‑aAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGaa             <  4:524351/149‑1 (MQ=255)                                                                                                                                        at‑aAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAg            >  3:392216/1‑149 (MQ=255)                                                                                                                                         t‑aAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGc           <  2:533555/149‑1 (MQ=255)                                                                                                                                            aaaaaaCCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCa         <  2:10311/149‑1 (MQ=255)                                                                                                                                             aaaaaCCCGCcgaagcgggtttttttatggggggagtttagggaaagagcatttgtcagaatatttaaggaatttctgaatactcataatcaatgtagagatgactaatatcctgaaactgactgaactaattgagtcaaactcggcaa        >  2:355579‑M1/1‑10 (MQ=255)                                                                                                                                             aaaaaCCCGCTTCGGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGaa                                                                                                         >  3:352966/1‑52 (MQ=21)                                                                                                                                              aaaaCCCGCttcggcgggtttttttatggggggagtttagggaaagagcatttgtcagaatatttaaggaatttctgaatactcataatcaatgtagagatgactaatatcctgaaactgactgaactaattgagtcaaactcggcaag       >  3:528688‑M1/1‑9 (MQ=255)                                                                                                                                              aaaaCCCGCttcggcgggtttttttatggggggagtttagggaaagagcatttgtcagaatatttaaggaatttctgaatactcataatcaatgtagagatgactaatatcctgaaactgactgaactaattgagtcaaactcggcaag       <  1:575033‑M1/149‑141 (MQ=255)                                                                                                                                               aaaCCCGCttcggcgggtttttttatggggggagtttagggaaagagcatttgtcagaatatttaaggaatttctgaatactcataatcaatgtagagatgactaatatcctgaaactgactgaactaattgagtcaaactcggcaagg      >  3:365422‑M1/1‑8 (MQ=255)                                                                                                                                                 aCCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCttt    <  1:560570/149‑1 (MQ=255)                                                                                                                                                   ccgccgAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTg                                                                                          >  2:372915/1‑61 (MQ=255)                                                                                                                                                   ccgccgAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTg                                                                                          <  1:372915/61‑1 (MQ=255)                                                                                                                                                   ccgccgAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTAc  >  1:440477/1‑149 (MQ=255)                                                                                                                                                   ccGCttcggcgggtttttttatggggggagtttagggaaagagcatttgtcagaatatttaaggaatttctgaatactcataatcaatgtagagatgactaatatcctgaaactgactgaactaattgagtcaaactcggcaaggattc  >  3:76884‑M1/1‑4 (MQ=255)                                                                                                                                                      |                                                                                                                                                  GGGGAAAAAGAGATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTAT‑AAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTAC  >  NC_000913/3377619‑3377912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.