BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4027518 =	271 (0.970)	8 (0.030)	8/254	NT	3.1%	noncoding (197/281 nt)	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
*	?	NC_000913	4027550 =	249 (0.940)	8 (0.030)	8/254	NT	3.1%	noncoding (229/281 nt)	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
Rejected: Frequency below/above cutoff threshold.

Only 100 of 318 total aligned reads displayed.

CGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATCAG  >  NC_000913/4027402‑4027698

     aTTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACAt                                                                                                                                                 >  1:2042866/1‑149 (MQ=255)

       ttgTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTg                                                                                                                                               <  1:1083572/147‑1 (MQ=255)

         gTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             >  2:244589/1‑149 (MQ=255)

         gTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             <  3:1193623/149‑1 (MQ=255)

         gTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             <  3:136487/149‑1 (MQ=255)

         gTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             <  4:1699401/149‑1 (MQ=255)

         gTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGAC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             >  3:1605585/1‑149 (MQ=255)

          tGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTg                                                                                                                                            <  3:1458296/149‑1 (MQ=255)

              tgatgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCgg                                                                                                                                        >  1:227075/1‑149 (MQ=255)

                atgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGAt                                                                                                                                      <  2:637271/149‑1 (MQ=255)

                 tgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATc                                                                                                                                     <  1:1153542/149‑1 (MQ=255)

                 tgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATc                                                                                                                                     <  1:708884/149‑1 (MQ=255)

                 tgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATc                                                                                                                                     <  2:36680/149‑1 (MQ=255)

                  gCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             <  3:1865116/140‑1 (MQ=255)

                  gCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGt                                                                                                                                             >  4:1865116/1‑140 (MQ=255)

                   ccTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCgg                                                                                                                                   <  2:2197225/149‑1 (MQ=255)

                   ccTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCgg                                                                                                                                   >  4:2122315/1‑149 (MQ=255)

                    cTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGt                                                                                                                                  <  4:1777535/149‑1 (MQ=255)

                          cGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCg                                                                                                                            <  1:1015839/149‑1 (MQ=255)

                           gACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGa                                                                                                                               >  3:2389298/1‑145 (MQ=255)

                           gACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGa                                                                                                                               <  4:2389298/145‑1 (MQ=255)

                            aCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGa                                                                                                                          <  2:2082631/149‑1 (MQ=255)

                            aCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGa                                                                                                                          >  1:2121622/1‑149 (MQ=255)

                             cGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGAt                                                                                                                         <  1:148470/149‑1 (MQ=255)

                                tGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAg                                                                                                                      <  3:1100390/149‑1 (MQ=255)

                                tGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAg                                                                                                                      <  3:38935/149‑1 (MQ=255)

                                 gTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAgg                                                                                                                     <  2:735809/149‑1 (MQ=255)

                                  tCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGc                                                                                                                    >  2:52550/1‑149 (MQ=255)

                                     cgTCTTATCGTGCCTACAAATAGTCCGGACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGtt                                                                                                                 <  1:431431/149‑1 (MQ=255)

                                       tCTTATCGTGCCTACAAATAGTCCAAACCGTAGGCCGGATAAGGCGTTTACGCAGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCa                                                                                                               >  2:1227810/1‑149 (MQ=255)

                                            tCGTGCCTACAGATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGc                                                                                                                    >  3:1427302/1‑139 (MQ=255)

                                            tCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGc                                                                                                                    <  4:1427302/139‑1 (MQ=255)

                                            tCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCAcgccg                                                                                                          >  2:1630363/1‑149 (MQ=255)

                                             cGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCAcgccgc                                                                                                         >  3:1471454/1‑149 (MQ=255)

                                                  cTACAAATAGTCCGAACCGTAGGCCGTATAACGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCACGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCg                                                                                                    >  4:1501704/1‑149 (MQ=255)

                                                  cTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCg                                                                                                    >  4:1326460/1‑149 (MQ=255)

                                                     cAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGc                                                                                                                    <  4:2187778/130‑1 (MQ=255)

                                                      aaaTAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAg                                                                                                                      >  3:1982323/1‑127 (MQ=255)

                                                       aaTAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAg                                                                                               >  2:1833062/1‑149 (MQ=255)

                                                         tAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTg                                                                                             <  3:339990/149‑1 (MQ=255)

                                                         tAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGATCACGCCGCATCCGGCAAGTg                                                                                             >  3:691125/1‑149 (MQ=255)

                                                          aGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTgg                                                                                            <  1:591744/149‑1 (MQ=255)

                                                          aGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTgg                                                                                            <  4:634356/149‑1 (MQ=255)

                                                          aGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTgg                                                                                            <  4:33718/149‑1 (MQ=255)

                                                              cGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTaa                                                                                        >  2:1185074/1‑149 (MQ=255)

                                                               gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTaaa                                                                                       >  4:1278274/1‑149 (MQ=255)

                                                                aaCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAAc                                                                                      <  3:572220/149‑1 (MQ=255)

                                                                aaCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCAGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAAc                                                                                      <  4:2020529/149‑1 (MQ=255)

                                                                 aCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAAcc                                                                                     <  1:182005/149‑1 (MQ=255)

                                                                          cGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAac                                                                            <  1:1186815/149‑1 (MQ=255)

                                                                            gATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAacac                                                                          >  2:1013864/1‑149 (MQ=255)

                                                                                  gCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAAc                                                                                      <  1:1331277/131‑1 (MQ=255)

                                                                                    gTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCaa                                                                  <  2:890193/149‑1 (MQ=255)

                                                                                      ttACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATa                                                                <  3:1518082/149‑1 (MQ=255)

                                                                                          gccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCt                                                            >  3:1791915/1‑149 (MQ=255)

                                                                                          gccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCt                                                            >  3:1015611/1‑149 (MQ=255)

                                                                                            cgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGa                                                          <  3:2133839/149‑1 (MQ=255)

                                                                                             gcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGAc                                                         <  4:1638062/149‑1 (MQ=255)

                                                                                               aTCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGAccc                                                       <  2:48732/149‑1 (MQ=255)

                                                                                                  cGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGa                                                    <  1:1545660/149‑1 (MQ=255)

                                                                                                   ggCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc                                                   <  2:1314571/149‑1 (MQ=255)

                                                                                                   ggCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc                                                   <  4:1156004/149‑1 (MQ=255)

                                                                                                   ggCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc                                                   <  4:2299871/149‑1 (MQ=255)

                                                                                                   ggCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc                                                   <  2:1282447/149‑1 (MQ=255)

                                                                                                   ggCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGACGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc                                                   <  1:536908/149‑1 (MQ=255)

                                                                                                        ttGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATa                                              <  3:29554/149‑1 (MQ=255)

                                                                                                          accaatgtagGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATaca                                            <  4:2093868‑M1/139‑1 (MQ=255)

                                                                                                               atgatgCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACAtcg                                       >  2:2333905/1‑149 (MQ=255)

                                                                                                               atgatgCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACAtcg                                       >  4:480205/1‑149 (MQ=255)

                                                                                                                tgatgCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACAtcgt                                      >  2:1042660/1‑149 (MQ=255)

                                                                                                                 gatgCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACGGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACAtcgtc                                     <  1:1778472/149‑1 (MQ=255)

                                                                                                                 gatgCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAGACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACAtcgtc                                     <  1:2225835/149‑1 (MQ=255)

                                                                                                                   tgCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGc                                   >  2:434717/1‑149 (MQ=255)

                                                                                                                     gcctgataagacgcgccagcgtcgcatcaggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGcc                                  >  1:1643588‑M2/33‑149 (MQ=255)

                                                                                                                      cctgataagacgcgccagcgtcgcatcaggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCaa                                                                              >  1:844306‑M2/32‑104 (MQ=255)

                                                                                                                       ctgataagacgcgccagcgtcttatcaggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAg                                >  1:2354834‑M2/31‑149 (MQ=255)

                                                                                                                        GATGCGACGCTGGC‑GCGTCTTATCCGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGAc                              >  2:1348545‑M1/1‑149 (MQ=255)

                                                                                                                         ATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGAcc                             <  4:500043‑M1/149‑1 (MQ=255)

                                                                                                                            cGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCaaa                          >  4:1552357/1‑149 (MQ=255)

                                                                                                                                gCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGa                      >  3:2239709/1‑149 (MQ=255)

                                                                                                                                 cTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGaa                     <  1:2488148/149‑1 (MQ=255)

                                                                                                                                 cTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGaa                     <  1:2445776/149‑1 (MQ=255)

                                                                                                                                  tGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAAc                    <  1:925191/149‑1 (MQ=255)

                                                                                                                                    gc‑gcGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGt                  >  3:971062/1‑149 (MQ=255)

                                                                                                                                       gcgTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCt                >  3:851954/1‑149 (MQ=255)

                                                                                                                                         gTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCttt              <  1:1367335/149‑1 (MQ=255)

                                                                                                                                         gTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCttt              <  2:1789634/149‑1 (MQ=255)

                                                                                                                                         gTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCttt              <  2:947206/149‑1 (MQ=255)

                                                                                                                                            ttATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCg           >  2:1903893/1‑149 (MQ=255)

                                                                                                                                            ttATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCg           >  2:1418793/1‑149 (MQ=255)

                                                                                                                                             tATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGt          <  4:696088/149‑1 (MQ=255)

                                                                                                                                               tcaggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTc        >  1:2108145‑M2/7‑149 (MQ=255)

                                                                                                                                               tcaggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTc        <  2:805059‑M2/143‑1 (MQ=255)

                                                                                                                                                caggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTcc       <  3:739067‑M2/144‑1 (MQ=255)

                                                                                                                                                 aggcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCa      <  3:268743‑M2/145‑1 (MQ=255)

                                                                                                                                                   gcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATc    <  2:2251660‑M2/147‑1 (MQ=255)

                                                                                                                                                   gcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATc    <  4:1978037‑M2/147‑1 (MQ=255)

                                                                                                                                                   gcCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATc    <  2:2282068‑M2/147‑1 (MQ=255)

                                                                                                                                                     cTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATCa   <  1:158698/148‑1 (MQ=255)

                                                                                                                                                     cTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATCa   >  2:158698/1‑148 (MQ=255)

CGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAAACTGAACGTCTTTGCGTTCCATCAG  >  NC_000913/4027402‑4027698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.