BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2286347 =	69 (0.440)	6 (0.040)	5/250	NT	7.6%	intergenic (+60/+43)	proL/yejO	tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system
*	?	NC_000913	2286381 =	81 (0.550)	6 (0.040)	5/250	NT	7.6%	intergenic (+94/+9)	proL/yejO	tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system

Only 100 of 112 total aligned reads displayed.

GTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCA  >  NC_000913/2286120‑2286649

gTTTTATCGATAACTGATTAATTATAAATCAGTTAGTGAAATATCTGTCTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCAACGAGTCGGCACGTAGCGCAGCCTGGTAGGGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCACAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGa                                                                                                                                                                                                                                                                 <  4:32147/275‑1 (MQ=255)

 ttttATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCaaa                                                                                                                                                                                                                                                                 >  2:308998/1‑272 (MQ=255)

     aTCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGGGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTc                                                                                                                                                                                                                                                            <  1:126219/275‑1 (MQ=255)

         cTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTATCGTGCCGACCAAAAATCCAAACAAAAAACCAACCCTTAAGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAAACCGTGACACATCCCA‑GCCTGTTTATTTTCTGTTATCAGAAAGTCCaca                                                                                                                                                                                                                                                        >  4:267334/1‑273 (MQ=255)

                     ttaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAACACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCt                                                                                                                                                                                                                                            <  2:297250/275‑1 (MQ=255)

                        taAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGAGAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGa                                                                                                                                                                                                                                          <  2:105349/274‑1 (MQ=255)

                                  aGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAACACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCAAGACCACACCCGCCTGAGTATTcccag                                                                                                                                                                                                                                >  4:307659/1‑271 (MQ=255)

                                   gCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGc                                                                                                                                                                                                                              <  2:141649/275‑1 (MQ=255)

                                              tACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTAcccc                                                                                                                                                                                                                   >  2:167151/1‑275 (MQ=255)

                                                                                 agcCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAAc                                                                                                                                                                                                                                                               >  3:54126/1‑196 (MQ=255)

                                                                                    cACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCtt                                                                                                                                                                              >  2:337248/1‑274 (MQ=255)

                                                                                    cACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCGGTTATCAGAACGTCCAGACCACACCCGCCGGAGTATTCCACGGCGATTCTCCCCCTGCCCCCTTGCCATAGCTTACTGACAAAttgcccccta                                                                                                                                                                             >  4:520527/1‑266 (MQ=255)

                                                                                     aCGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTcc                                                                                                                                                                                                                                                           <  1:54126/196‑1 (MQ=255)

                                                                                                 gTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTAtttt                                                                                                                                                                                                                                                                            <  2:504622/167‑1 (MQ=255)

                                                                                                   aGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGCCAAATGACCGCTTCACGTCGTGGTAAAc                                                                                                                                                               >  2:54003/1‑274 (MQ=255)

                                                                                                      gcAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                                                                                            <  4:337247/274‑1 (MQ=255)

                                                                                                              gTAGCGCACCGTAATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGGGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTtata                                                                                                                                                   <  2:141252/275‑1 (MQ=255)

                                                                                                               tAGGGCACCGTCATGGGGGGTCGGGGGTCGGAGGTTCAATTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATAc                                                                                                                                                  <  2:267335/275‑1 (MQ=255)

                                                                                                                        gccATGGGGTTTCGGGGGTCGGAGGTTCCAATCCTCTCGTGCCGACCAAAAATCCCCAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGcc                                                                                                                                                                                                             <  4:432427/205‑1 (MQ=255)

                                                                                                                                   tCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCAACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGGTGACATTATCCCAGCCTGAAAAACGcacctg                                                                                                                              >  2:351434/1‑270 (MQ=255)

                                                                                                                                        ggTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTc                                                                                                                          <  2:393353/274‑1 (MQ=255)

                                                                                                                                                                 ccGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCa                                                                                                <  2:520528/275‑1 (MQ=255)

                                                                                                                                                                 ccGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCa                                                                                                <  4:167150/275‑1 (MQ=255)

                                                                                                                                                                                 aGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGt                                                                                                                                                                                                                                                                        >  6:324052/1‑91 (MQ=255)

                                                                                                                                                                                 aGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGt                                                                                                                                                                                                                                                                        <  5:324052/91‑1 (MQ=255)

                                                                                                                                                                                   aaaaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAg                                                                                                                                                                                                                                                         <  6:102406/104‑1 (MQ=255)

                                                                                                                                                                                    aaaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTAtt                                                                                                                                                                                                                                     >  8:253352/1‑123 (MQ=255)

                                                                                                                                                                                    aaaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTAtt                                                                                                                                                                                                                                     <  7:253352/123‑1 (MQ=255)

                                                                                                                                                                                     aaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTa                                                                                                                                                                                                                                                                      >  6:658898/1‑89 (MQ=255)

                                                                                                                                                                                     aaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTa                                                                                                                                                                                                                                                                      <  5:658898/89‑1 (MQ=255)

                                                                                                                                                                                       aaccaaccGTAAGGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTcc                                                                                                                                                                                                                                   >  7:991746/1‑122 (MQ=255)

                                                                                                                                                                                        accaaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCg                                                                                                                                                                                                                             <  6:671889/127‑1 (MQ=255)

                                                                                                                                                                                        accaaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCg                                                                                                                                                                                                                             >  5:671889/1‑127 (MQ=255)

                                                                                                                                                                                            accCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGcc                                                                                                                                                                                                       <  8:599259/145‑1 (MQ=255)

                                                                                                                                                                                             cccTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACCTATCACA‑GCTTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCAATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAAAGATGACCTTATACCAGCCTGATAAACGCCGCTGGTTCCAGCCACATCATTATTAAATTTGCCATAGTACTTAATTTTCCCCTGGTTAGAAt                                                                    >  4:386815/1‑275 (MQ=255)

                                                                                                                                                                                                ttACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAg                                                                                                                                                                                                                                                         >  6:56908/1‑91 (MQ=255)

                                                                                                                                                                                                ttACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAg                                                                                                                                                                                                                                                         <  5:56908/91‑1 (MQ=255)

                                                                                                                                                                                                 tACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCcaca                                                                                                                  <  2:140656/225‑1 (MQ=255)

                                                                                                                                                                                                     gttggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTAcc                                                                                                                                                                                                                     <  7:449522/122‑1 (MQ=255)

                                                                                                                                                                                                     gttggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCAAACCCGCCTGAGTATTCCACGGCGATTCTAcc                                                                                                                                                                                                                     >  8:449522/1‑122 (MQ=255)

                                                                                                                                                                                                           ttttttATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATg                                                                                                                                                                                     <  7:181750/148‑1 (MQ=255)

                                                                                                                                                                                                                   atCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTa                                                                                                                                                                             >  5:743302/1‑148 (MQ=255)

                                                                                                                                                                                                                      tGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACg                                                                                                                                                                          >  5:644307/1‑148 (MQ=255)

                                                                                                                                                                                                                       gCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCg                                                                                                                                                                                                                             <  7:440038/96‑1 (MQ=255)

                                                                                                                                                                                                                       gCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCg                                                                                                                                                                                                                             >  8:440038/1‑96 (MQ=255)

                                                                                                                                                                                                                        cAATGAATTCTATAAACAGACCCTGACA‑ACTACAGGCCTGTTTATTTTCTGTTCTCCGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCAGAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCtt                                         <  4:351433/275‑1 (MQ=255)

                                                                                                                                                                                                                         aattaattCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTg                                                                                                                                                                                                                                           <  8:770181/80‑1 (MQ=255)

                                                                                                                                                                                                                         aattaattCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTg                                                                                                                                                                                                                                           >  7:770181/1‑80 (MQ=255)

                                                                                                                                                                                                                          attaattCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACcac                                                                                                                                                                                                                                                    <  8:19101/70‑1 (MQ=255)

                                                                                                                                                                                                                          attaattCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACcac                                                                                                                                                                                                                                                    >  7:19101/1‑70 (MQ=255)

                                                                                                                                                                                                                           ttaattCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCGAGACCACACCCGcc                                                                                                                                                                                                                                             <  8:843229/76‑1 (MQ=255)

                                                                                                                                                                                                                           ttaattCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGcc                                                                                                                                                                                                                                             >  7:843229/1‑76 (MQ=255)

                                                                                                                                                                                                                               ttCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTg                                                                                                                                                                                                                                           <  6:631275/74‑1 (MQ=255)

                                                                                                                                                                                                                               ttCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCgg                                                                                                                                                                      <  7:589763/143‑1 (MQ=255)

                                                                                                                                                                                                                                tCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTa                                                                                                                                                                                                                                       >  8:748581/1‑77 (MQ=255)

                                                                                                                                                                                                                                tCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTa                                                                                                                                                                                                                                       <  7:748581/77‑1 (MQ=255)

                                                                                                                                                                                                                                tCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGctg                                                                                                                                                                                                >  5:1028472/1‑116 (MQ=255)

                                                                                                                                                                                                                                  gATGAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCAc                                                                               <  2:205153/227‑1 (MQ=255)

                                                                                                                                                                                                                                   ATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGa                                                                                                                                                                                                                            <  8:620696‑M1/85‑1 (MQ=255)

                                                                                                                                                                                                                                   ATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGa                                                                                                                                                                                                                            >  7:620696‑M1/1‑85 (MQ=255)

                                                                                                                                                                                                                                   ATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTGTCACCTGGTTAGAATCGGCTTATTCCTGACTCACGGCCGCTTTCAGCCAggg                               <  1:20916‑M1/274‑1 (MQ=255)

                                                                                                                                                                                                                                     AAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGt                                                                                                                                                                                                                                                                        >  5:525874‑M1/1‑39 (MQ=255)

                                                                                                                                                                                                                                     AAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGt                                                                                                                                                                                                                                                                        <  6:525874‑M1/39‑1 (MQ=255)

                                                                                                                                                                                                                                      AACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTcc                                                                                                                                                                                                                                   >  6:989310‑M1/1‑75 (MQ=255)

                                                                                                                                                                                                                                      AACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTcc                                                                                                                                                                                                                                   <  5:989310‑M1/75‑1 (MQ=255)

                                                                                                                                                                                                                                         caggctgtgatgtgtcacggtctgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAg                                                                                                                                                                                                   <  7:309012‑M2/76‑1 (MQ=255)

                                                                                                                                                                                                                                         caggctgtgatgtgtcacggtctgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAg                                                                                                                                                                                                   >  8:309012‑M2/30‑105 (MQ=255)

                                                                                                                                                                                                                                         caggctgtgatgtgtcacggtctgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATg                                                                                                                                                           >  8:940681‑M2/30‑145 (MQ=255)

                                                                                                                                                                                                                                         caggctgtgatgtgtcacggtctgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATg                                                                                                                                                           <  7:940681‑M2/116‑1 (MQ=255)

                                                                                                                                                                                                                                           aCCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTta                                                                                                                                                     <  6:743302/148‑1 (MQ=255)

                                                                                                                                                                                                                                             ctgtgatgtgtcacggtctgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCt                                                                                                                                                                                                                        >  6:126050‑M2/26‑80 (MQ=255)

                                                                                                                                                                                                                                             ctgtgatgtgtcacggtctgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCt                                                                                                                                                                                                                        <  5:126050‑M2/55‑1 (MQ=255)

                                                                                                                                                                                                                                              gTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATAc                                                                                                                                                  >  7:433109/1‑148 (MQ=255)

                                                                                                                                                                                                                                                gACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTta                                                                                                                                                     <  6:484730/143‑1 (MQ=255)

                                                                                                                                                                                                                                                gACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTta                                                                                                                                                     >  5:484730/1‑143 (MQ=255)

                                                                                                                                                                                                                                                gACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTATAATCGGCGTATTCCTTACGCACGGCCGCTTTCAGCCCGGGTTCCGGcgtcgtc                  >  4:55254/1‑273 (MQ=255)

                                                                                                                                                                                                                                                acagcaTCACA‑GCCTGTTTATTTTCTTTTATCAGAACTGCCAGACCCCACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTAc                 <  4:365229/271‑1 (MQ=255)

                                                                                                                                                                                                                                                 acacATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAg                                                                                                                                               <  6:644307/148‑1 (MQ=255)

                                                                                                                                                                                                                                                   acaTCACA‑GACTGTTTATTTTCGGTTATCAGAAGGTTCCGACTTCAAACCCCTGAGTAGTCTACGGAGATTCTACCCCTGCGCCATTGCCATAGCTGGCTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGcc                                                                                                                                             >  6:286889/1‑148 (MQ=255)

                                                                                                                                                                                                                                                    caTCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTg                                                                                                                                                                                                                                           <  7:799743/53‑1 (MQ=255)

                                                                                                                                                                                                                                                    caTCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTg                                                                                                                                                                                                                                           >  8:799743/1‑53 (MQ=255)

                                                                                                                                                                                                                                                      tCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCAt                                                                                                                                                                                                     <  6:101259/89‑1 (MQ=255)

                                                                                                                                                                                                                                                      tCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCAt                                                                                                                                                                                                     >  5:101259/1‑89 (MQ=255)

                                                                                                                                                                                                                                                       caca‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATg                                                                                                                                                           >  6:280026/1‑130 (MQ=255)

                                                                                                                                                                                                                                                       caca‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATg                                                                                                                                                           <  5:280026/130‑1 (MQ=255)

                                                                                                                                                                                                                                                        aca‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGCCAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                                                                                            >  5:636842/1‑128 (MQ=255)

                                                                                                                                                                                                                                                          a‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTTACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAg       <  2:307660/275‑1 (MQ=255)

                                                                                                                                                                                                                                                               tgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCtt                                                                                                                                                                              >  8:311665‑M2/8‑104 (MQ=255)

                                                                                                                                                                                                                                                               tgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCtt                                                                                                                                                                              <  7:311665‑M2/97‑1 (MQ=255)

                                                                                                                                                                                                                                                               tgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCt                                                                                                                                            <  8:1072117‑M2/131‑1 (MQ=255)

                                                                                                                                                                                                                                                               tgtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCt                                                                                                                                            >  7:1072117‑M2/8‑138 (MQ=255)

                                                                                                                                                                                                                                                                gtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACCTCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCTTATTCCTGCCGCAAGGCCGCTTTCAGCCAGGGTTCCCGCGTCGTCCCGTTTTGCAGTtccg  >  4:42010‑M2/7‑274 (MQ=255)

                                                                                                                                                                                                                                                                gtttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGcgtc                     >  2:365230‑M2/7‑256 (MQ=255)

                                                                                                                                                                                                                                                                 tttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTCACGTCGGGGTAAACGAt                                                                                                                                                            >  8:218897‑M2/6‑120 (MQ=255)

                                                                                                                                                                                                                                                                  ttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCACTGCGCCATTGCCATAGctgac                                                                                                                                                                                              >  7:957634‑M2/5‑85 (MQ=255)

                                                                                                                                                                                                                                                                  ttatTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCACTGCGCCATTGCCATAGctgac                                                                                                                                                                                              <  8:957634‑M2/81‑1 (MQ=255)

                                                                                                                                                                                                                                                                    atTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGa                                                                                                                                                                                    >  5:413038‑M2/3‑93 (MQ=255)

                                                                                                                                                                                                                                                                    atTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGa                                                                                                                                                                                    <  6:413038‑M2/91‑1 (MQ=255)

                                                                                                                                                                                                                                                                      tttCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCtt                                                                                                                                                      >  8:544419/1‑121 (MQ=255)

                                                                                                                                                                                                                                                                      tttCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCtt                                                                                                                                                      <  7:544419/121‑1 (MQ=255)

GTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACA‑GCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTACCGTTTTGCAGGTCCA  >  NC_000913/2286120‑2286649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.