| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 847,214 | T→A | 5.4% | intergenic (‑95/+44) | glnP ← / ← glnH | glutamine transporter subunit/glutamine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 847,214 | 0 | T | A | 5.4% | 367.5 / 7.6 | 103 | intergenic (‑95/+44) | glnP/glnH | glutamine transporter subunit/glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (51/46); new base A (2/4); total (53/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.94e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CAATAAAGACCAGCGCGACGTGGTTGGCTATCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGC > NC_000913/846942‑847488 | cAATAAAGACCAGCGCGACGTGGTTGGCTATCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATa > 2:500669/1‑274 (MQ=255) aTAAAGATCAGCGCTACGTGGTTGGCTATCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATACACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATGCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAgg < 2:158207/274‑1 (MQ=255) aCCAGCGCGACGTGGTTGGCTATCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGgag > 2:363381/1‑272 (MQ=255) ccAGCGCGACGTGGTTGGCTATCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAggg < 4:363380/275‑1 (MQ=255) gattcgtcgtgccACCCGCCGAAGGTGCAGGCAAACCCTGACAGCAATCCGCTTACCAGGGCGCCTTGCAGGCGGCGGACGGAAATCCACAGGGTCATTTTGGGACCGTCAAACAGAAGCGGAATGGCAGGACAGATGGCACTCCATGCACACTGCATCTGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAGTTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCGCT‑CCCCATAGGGGAGAGGGAACTGCCAGTg < 4:459728/264‑1 (MQ=255) ttGGCTATCCAACCTCCGAAGGGGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCTCCCCCATAGGGGAGAGGGAACTGCCAGTg < 2:126960/273‑1 (MQ=255) tCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCCGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCCTATGTTGTTCCTGTTACCGTGGTGTAACTAATCCAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCC‑ACCCATAGGGGAGAGGGAACTGCCATTTCGGTTTTCAg > 4:532014/1‑275 (MQ=255) cttgaaaaaCCGGCCAGCAAGCCGAGTACCAAACCGCCTGCCAGACCGAGGACCGACATCCACAGGGTCACTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATAGGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTGGCGCCCCTCACCATAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTAttt < 4:50951/270‑1 (MQ=255) cgtgcAAAACCTGCCAGCAATACGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGACGCGGAATGGCAGGCCAGATGTCCCTACAGTCAAACTGCATATGTTGTTCCTGGTACCGTGGTGTAAATAATCAAATTAATGGCAATTAATTGCCCCGGCGCGGGTCTGCGCACCTCACCCTAAGCCACT‑CACCATCGGGGAAAGGGAACTTGCGGTGCGCTTTACCGGTGTTGCGTCATTAttt > 4:182302/1‑275 (MQ=255) ccTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGCGGGAACTGCCAGTGCGTTTTACCGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCCTTTTTTGTAGTTTTCGt > 2:412616/1‑274 (MQ=255) cTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGtt > 2:162497/1‑274 (MQ=255) cGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCCTTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTcg > 2:450468/1‑274 (MQ=255) aTCCACAGGGTCATTTTGGACCCTCAAATCAGAAGCGGAATGGATGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGGGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAg < 4:352718/275‑1 (MQ=255) gccACAGGGTAATTTTGGAACGTTAAATCGGAAGCGGAATGGCAGGCCAGATGGCACTCCAGGAAAACTGCATAGGTTGTTCCTGTGACCGGGGTGTAAATAATCAAAGGCAGGGTAATTAATGGCACCGGAGCGGGTTTGCGCCCCTCACCCGAAGCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTATCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAg < 4:212295/273‑1 (MQ=255) ccACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTAc < 4:319532/197‑1 (MQ=255) ccTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCAt > 8:16018/1‑148 (MQ=255) cTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACt > 2:311453/1‑275 (MQ=255) tCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGgag < 7:16018/148‑1 (MQ=255) cGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCt < 4:162496/275‑1 (MQ=255) gAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGAGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCTTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCAAGCCGCtct > 2:210192/1‑274 (MQ=255) aaTGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCTATGGGgag > 7:43344/1‑138 (MQ=255) cAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAgggg < 7:215505/131‑1 (MQ=255) cAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAgggg > 8:215505/1‑131 (MQ=255) ccAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCTATGGGgaga < 5:681332/118‑1 (MQ=255) ccAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAg > 8:333957/1‑148 (MQ=255) cacgcANACTTCATATGTTTTTCCTGTTACCGTGGTGTAAAATATACACATCGGGGGACTTAAGGGCCCCGGAGCGGCTGTGTGCCCCGTGCCCTCATCCCCC‑CCCCATAGGGGGGAGGGAACGGCCAGGGCGTTTTACTGGTGTAGCGTTGTTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCaa < 4:511808/270‑1 (MQ=255) cAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGc < 7:333957/148‑1 (MQ=255) cAGTCAAACTGCAAATGTTTTTCCTGTTACCGGGGTGTAAAAAATCAAATTAAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTAACCCTAATCCTCA‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCaa < 4:450467/274‑1 (MQ=255) aCTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATa < 6:636236/103‑1 (MQ=255) aCTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATa > 5:636236/1‑103 (MQ=255) gCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTTCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGTTTTCGTTGTAATTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCATCTCGTCGCTCCCTTTCGGGAACGCAAACCCGTTTtgc > 4:123020/1‑275 (MQ=255) tCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGa > 7:645189/1‑100 (MQ=255) tCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGa < 8:645189/100‑1 (MQ=255) tCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTg < 7:579092/104‑1 (MQ=255) tCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTg > 8:579092/1‑104 (MQ=255) ccTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCTGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCag > 2:93725/1‑274 (MQ=255) cTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATa < 5:1117705/87‑1 (MQ=255) cTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATa > 6:1117705/1‑87 (MQ=255) tGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGtta < 7:200583/128‑1 (MQ=255) tGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGtta > 8:200583/1‑128 (MQ=255) ttACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATCCCGTATTGCTGCGCTTCCAGAGAGt > 2:439469/1‑275 (MQ=255) ttACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCAACCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGtttt < 6:323757/111‑1 (MQ=255) ttACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCAACCTAATCCTCT‑CCCCATAGGGGAGAGCGAACTGCCAGTGCGtttt > 5:323757/1‑111 (MQ=255) tACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGaa > 6:969510/1‑95 (MQ=255) tACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGCaa < 5:969510/95‑1 (MQ=255) gtAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTTCGCTTCCAGAGAGTCACCTCCCGc > 2:302678/1‑275 (MQ=255) tAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCCCCCCTCACCCTAATCCGCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCt < 1:44488/275‑1 (MQ=255) aataatCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCAt > 8:656798/1‑70 (MQ=255) aataatCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCAt < 7:656798/70‑1 (MQ=255) atCAAATTCTGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGt > 7:68792/1‑119 (MQ=255) atCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGt < 8:68792/119‑1 (MQ=255) cAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTAc > 6:900162/1‑94 (MQ=255) cAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACa > 7:173472/1‑95 (MQ=255) taattaatGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAg > 5:671658/1‑55 (MQ=255) taattaatGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAg < 6:671658/55‑1 (MQ=255) aattaatGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACa < 5:342514/83‑1 (MQ=255) aattaatGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACa > 6:342514/1‑83 (MQ=255) ccccGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTTCGCTTCCAGAAAGTCACCTACCGCTTTGAACTGACGGTTACCGGCGGTTTtgtt > 2:475430/1‑273 (MQ=255) ccGGGGCGGGGTTGGGCCCCTCACCCAAACCCGCT‑CCCCAAAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTtgatg < 4:302677/274‑1 (MQ=255) ccGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCGATCCCGTATTGCTGCGCTTCCAGGGAGTCACCTACCGATTTGAACTGACCGTTCCCGGCGGTTTtgagga > 4:184726/1‑275 (MQ=255) ctgggCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTtgatga < 4:93724/270‑1 (MQ=255) cGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATATGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTtgatg < 2:134109/273‑1 (MQ=255) ggAGCGGGTTTGCGCCTCTCACCCTAATCCTCT‑CCCCCTAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCCCGCAGCTCGTCGCTACCTTTCGGGAACGCCATACCGTATTGCTGCGCTTCCCTAGAGCCCCCTCCCCCTTTGAACTTACCGTTACCGGCGGTTTGTATGaaa > 4:255593/1‑274 (MQ=255) gTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAgg > 8:1092105/1‑42 (MQ=255) gTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAgg < 7:1092105/42‑1 (MQ=255) tttGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGt < 5:185509/72‑1 (MQ=255) tttGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGt > 6:185509/1‑72 (MQ=255) tGCGCCCCTCACGCTAATCCGCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGTGTCAGTATCGAACCAGTTTTTGTAGATTTCGTTTTAAGTTCCGTTCTCGCGCACGCTTATAAACGCGCAGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCATCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGt < 4:255710/275‑1 (MQ=255) cccTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCAttttt < 6:34382/96‑1 (MQ=255) cccTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCAttttt > 5:34382/1‑96 (MQ=255) ccTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGc < 2:215859/274‑1 (MQ=255) ccTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGc < 2:532015/274‑1 (MQ=255) cccTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGgtgt < 8:660286/54‑1 (MQ=255) cccTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGgtgt > 7:660286/1‑54 (MQ=255) tAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTTTGATTTCGGTTCAGTACCGATCCATTTGTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGGTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGc < 2:182303/275‑1 (MQ=255) ctct‑CCCCTATGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGtt < 6:329133/107‑1 (MQ=255) tct‑cCCCTATGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGAc > 5:719499/1‑136 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCAtttt > 4:555640/1‑78 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCCCGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCCGATAGTCACCTCCCGCTTTGAACTGACCGTTACCGGCGGTTTTGTTGAAGTACCGCATGCTTTGCGTATCGTGCAGAACGGc > 1:49542/1‑275 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATtgc > 3:137255/1‑183 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCCCCTACCGCTTTGAACTGCCCGTTACCGGCGGTTTTGATGAAGTCCAGAATGTTTGGCGTATCGTGCAGAACGGc > 4:313426/1‑275 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTTACCTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGc > 4:478735/1‑275 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGTTGAATTACAGAATGTTTGGCGTATCGTGCAGAACGGc > 2:362931/1‑275 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGc > 2:322385/1‑275 (MQ=255) t‑cCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGNCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGANTGTTACCGGGGGTTTTGATGAAGTANAGAAGTTTTGGCGTTTTGTGCAGAACggg > 3:94214/1‑274 (MQ=255) ccccATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGGCGCGTTGaaa > 7:178818/1‑132 (MQ=255) cccATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTtct < 7:454440/104‑1 (MQ=255) cccATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTtct > 8:454440/1‑104 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGt < 2:555641/78‑1 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAg > 6:925039/1‑80 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAg < 5:925039/80‑1 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAg < 8:340657/80‑1 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGa > 8:1008831/1‑129 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGa < 7:1008831/129‑1 (MQ=255) cATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTgcg < 1:137255/183‑1 (MQ=255) aTAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGc < 8:625707/139‑1 (MQ=255) aTAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGc > 7:625707/1‑139 (MQ=255) tAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCtcgtcg > 5:240120/1‑147 (MQ=255) tAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCtcgtcg < 6:240120/147‑1 (MQ=255) tAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTTCAGAACGGCGTTTgg > 2:63057/1‑274 (MQ=255) | CAATAAAGACCAGCGCGACGTGGTTGGCTATCCAACCTCCGAAGGTGCGTGCAAAACCTGCCAGCAATCCGATTACCAGACCGCCTGCCAGACCGAGGACCGAAATCCACAGGGTCATTTTGGCACCTTCAATCAGAAGCGGAATGGCAGGCCAGATGGCACTCCAGTCAAACTGCATATGTTGTTCCTGTTACCGTGGTGTAAATAATCAAATTCAGGGTAATTAATGGCCCCGGAGCGGGTTTGCGCCCCTCACCCTAATCCTCT‑CCCCATAGGGGAGAGGGAACTGCCAGTGCGTTTTACAGGTGTAGCGTTATTATTTCGGTTCAGTACCGAACCATTTTTTGTAGATTTCGTTGTAAGTTCCGTTCTCGCGCAGGGTTTTCAACGCGCCGTTGACTTTGTCACGCAGCTCGTCGCTACCTTTCGGGAACGCAATACCGTATTGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGC > NC_000913/846942‑847488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |