| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 857,580 | G→A | 10.8% | intergenic (+25/+216) | ybiT → / ← ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 857,580 | 0 | G | A | 10.8% | 259.7 / 21.0 | 94 | intergenic (+25/+216) | ybiT/ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| Reads supporting (aligned to +/- strand): ref base G (41/42); new base A (5/5); total (46/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.55e-02 | |||||||||||
ATGATGCAGAAGCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAACGCTCGCTTACCGTGAATGTTGAGGTCGGCAAG > NC_000913/857319‑857846 | atgatgCAGAAGCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGAcgg < 2:510792/274‑1 (MQ=255) agagacaaaTTCTGTTCATTGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGAc < 2:537146/267‑1 (MQ=255) gCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCtgatga > 2:368716/1‑273 (MQ=255) gCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAA‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCcgatgaa > 2:464926/1‑273 (MQ=255) aaCAATCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATg < 2:358936/275‑1 (MQ=255) tGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGNCCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAAATTACCTGCG‑TANTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATAATGTCGGNGNTCGGGCGGATGATGACaaaa > 3:40386/1‑266 (MQ=255) aTGGATGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTg < 2:208438/275‑1 (MQ=255) ggACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGGGATCGACGTTAGCGGTAATTAAGAAGATTAACTGCG‑TAGGAAAGGGATCGAGTAAGGGATTAT‑CCGTACCCCCGAAACCGTCGGGGGGACGGGGGCTGTAGACAAATGCacaagatatctct > 4:537145/1‑266 (MQ=255) aaCCGACCAACCACCTGGATATGGACTCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACCCGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGCACGCGTGATCGACTTTCGCGGTCATTCCGAAGATTACCTGCG‑TAGGAAAGGGATCGAGTAAGTGATTAT‑CCGGCACCCCGAAACCGTCGGGGAGACGGGGCCTGATGCCAAAGACAAAATatcacgtctacc > 4:529829/1‑263 (MQ=255) aCCGACCAACCACTTGGATATGGAAGCAATTGGGCAGC‑TGAACATTGCAGTCGAACCGTCTAAGGGCCGGCTGATCGTTTTTTTACACGGCCGTGGGTTCTTAAGCGCCATGTGGACCCGCATGCTGGAGATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTTCGAAGATTACAGGAG‑TAGGAAAGGGAACGAGAAAGGGATTAT‑CCGTAACCCGGGTACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTa < 4:400733/275‑1 (MQ=255) cGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACg < 4:368715/275‑1 (MQ=255) accaaccaCCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAANGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACNCCGATACTGTCGGGGTGACGGCGGCTGTTGNNCAATGCAAACAAGCCAGCTGCGCTaag > 3:75314/1‑271 (MQ=255) gcTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGGATCAGGGCACGCTGATCTTTGTTTCCCACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGc < 2:167812/274‑1 (MQ=255) ggATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACCACTGCAAAATAGACTGATACGCTAAGCTTCTCAGGCCTa > 1:123065/1‑275 (MQ=255) atatGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACg < 2:74714/275‑1 (MQ=255) tctGGAAGCCATTGAGTCGC‑TGAACATGGACTTGGAACTGTATAAGGGCACGTTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTGTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc < 2:20542/273‑1 (MQ=255) atGGAATCCATTGAGGCGCGTAAACAGGGC‑CGTGAACGTTATCAGGGCATGCTGATCTTTGTGTCACACTAACGGGATTTCGTAAGTTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CGGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGATACGCGTATCAGGCCTACGCa < 4:80186/275‑1 (MQ=255) atGGAATCCATTGAGGCGC‑TGAACATGGCACTGGAACTGTATCAGGGCCGGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc < 2:529830/274‑1 (MQ=255) ggACTCCATTGAGTTGC‑GTAACATAGCACTGGAATTGTAGTACGGCAGGCTGATCTTTGGTGCACACGACCGTGAGTTCGTAAGCGCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGGGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGt < 4:176181/275‑1 (MQ=255) aaTCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATa < 2:4997/239‑1 (MQ=255) ccATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAgg > 2:280971/1‑260 (MQ=255) tGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTa < 4:280970/260‑1 (MQ=255) c‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGCTCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGCCAAATGCAAAATAGCCTGATTCGCTACGCTTATCAGGACTACGCAGTACCTGCAATATATTGa > 2:7256/1‑275 (MQ=255) tGAACATTGCACTGGAACTGTAGCATGGCACGCTGATCTTTGGTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGa < 2:15299/274‑1 (MQ=255) tGGCACTGGACCTGTATCAGGGCACGCTCATCTTTGTTGCAAAGGACCGTGAGTTCGTAAGCTCCCTGTAGACCCGCAGTCTGGAAATCACCCCGGAACGCGTGATCGACGTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCa < 4:253175/275‑1 (MQ=255) gTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGAACGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGAACCTGCAATATATTTACTCTGCAGGACTTTGTAGGc > 4:343726/1‑275 (MQ=255) gggCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTAcc > 2:226262/1‑236 (MQ=255) aCGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCa < 4:226261/236‑1 (MQ=255) cGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAAGCTGCAGGACTTTGTAGGCCGGAAAAAGCg > 4:307194/1‑275 (MQ=255) tttCGCACGACCGTGGGGTCGTAAGGCCCCTGGCGACCCGCATTCTGGAAATCACCCCGGGACGCGTGATCGTCTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGGTCGAGTAAGTGATTAT‑CCGTCACCCCGTTACTGTCGGGGTGACGGCGGCTGATGCCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCAt < 4:128381/275‑1 (MQ=38) ttCACACGTCCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCATCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCAt < 2:523992/274‑1 (MQ=255) tgcacaCGACCGTGAGTTCGTAAGCCCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCAt < 2:307195/272‑1 (MQ=255) cacGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAg > 2:128382/1‑273 (MQ=255) cacGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCgggg < 6:344650/148‑1 (MQ=255) cacGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCggg < 8:1124766/147‑1 (MQ=255) cacGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCggg > 7:1124766/1‑147 (MQ=255) tGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATNNNGCCTaag > 4:562361/1‑197 (MQ=255) tGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACa > 2:6163/1‑274 (MQ=255) ttCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGt < 2:562362/199‑1 (MQ=255) tCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATg > 2:547915/1‑157 (MQ=255) gTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCAt > 1:109866/1‑275 (MQ=255) aaGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCaaa < 4:547914/157‑1 (MQ=255) cccTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgggg < 7:540130/126‑1 (MQ=255) cccTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgggg > 8:540130/1‑126 (MQ=255) cccTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCgggg < 7:856895/126‑1 (MQ=255) cccTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCgggg > 8:856895/1‑126 (MQ=255) tGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCtgatg < 7:663749/138‑1 (MQ=255) tGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCtgatg > 8:663749/1‑138 (MQ=255) cGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCgggg > 5:899586/1‑115 (MQ=255) tCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCGGGGTGAcggataa > 6:659912/1‑116 (MQ=39) tCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCGGGGTGAcggataa < 5:659912/120‑5 (MQ=38) ccccGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgg > 7:925085/1‑97 (MQ=255) ccccGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgg < 8:925085/97‑1 (MQ=255) cGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTCCGCTTATCAGGCCTACGCAGTACCTGCCATATATTGAATCTGCAGGACTTTGTAGGACGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCCCATTTTTCCACAATCGGCGTAACTGCGAACAGATtttttt > 4:21250/1‑275 (MQ=38) aaCGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgcc > 1:43235/1‑211 (MQ=255) cggtgtatagtcTTCAGCGGTAATTACCAAGAGTTCC‑GCGAGTGTAAAGGGACCGAGTAAGTTAATAT‑CCTTACCCCNGATACTGTCGCGGTGACGGCGGCTGATGACCACTGCAAAATAGCCTGTGGCGCTACGCTTATCAGGCCTAAGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGAGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATcc < 3:123065/264‑1 (MQ=255) cGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgggg < 6:669172/83‑1 (MQ=255) cGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgggg < 6:1068258/83‑1 (MQ=255) cGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgggg > 5:669172/1‑83 (MQ=255) cGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCgggg > 5:1068258/1‑83 (MQ=255) ttAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGc > 4:561778/1‑132 (MQ=255) ttAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCGGGGTGa < 8:364863/81‑1 (MQ=38) ttAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGACAGTATCGGGGTGa > 7:364863/1‑81 (MQ=38) cGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTAc < 2:561779/132‑1 (MQ=255) aGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCg < 5:1042952/59‑1 (MQ=255) aGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCg > 6:1042952/1‑59 (MQ=255) gATTAGCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCaaa < 1:40386/275‑1 (MQ=255) agggacagggaaaGGGATAGAGTACGT‑TTNATCCCGTCACCCCGATACTGTCGGGNGGACGGCGGCGGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAANCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATcc < 3:96090/265‑1 (MQ=37) tagtaAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGGTTTTCTTAATCCCCACTCAATTAACTTCCATTAATTCCCAAACATCCCTTccc > 4:530804/1‑275 (MQ=255) tagtaAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTAACTGCACTATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGGCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAAAATCCATGcc > 4:197721/1‑274 (MQ=255) taAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCCGAGTAACGTCGAATCCATTTCCTTCATCCCACATCAATTCACTACCATTAATTCTCAACCATCCATCCCCaa > 4:130970/1‑274 (MQ=255) aaGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAAcg < 1:75314/274‑1 (MQ=255) aaGGGATCGAGGAATTGATTAT‑CCGTCACCCAGGTACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACACAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAAcg < 1:43725/274‑1 (MQ=255) aGGGATAGAGTAAATGTTGAC‑CCGTCACCCCGATACTTGCGGGGGAGCGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAAcgct < 4:6163/275‑1 (MQ=38) tCGAGTACGTAATTAA‑CCGTCCCCCCGATGCGGTCGGGGTGACGACGGCTCATGACAAATACAAAGTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTCCCTGCAATATATTGAGTCTGCAGGGCTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCACATTTGTCAGCAATCTGAGGAACGTCGAATCGATTTTCTTAATCCCACATCGATTCACTTCCATTAATTCTCAGACAACCATGCCCAAcgctcgct < 4:464925/274‑1 (MQ=37) gAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAAc > 1:96090/1‑252 (MQ=255) gAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCCCAAACCTCCATGCCCAACCCTCGCttcc > 4:282307/1‑273 (MQ=255) aGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAACGCTCGCTTAc < 2:21250/274‑1 (MQ=255) aaGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCt < 8:462580/66‑1 (MQ=255) aaGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCt > 7:462580/1‑66 (MQ=255) aGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAACGCTCGCTTACCGTGa > 2:208149/1‑275 (MQ=255) ttAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGATAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAGTTCACTTCCATTAATTCTCAAACATCCTTGCCCAACGCTCGCTTACCGTGAATGtt > 4:98887/1‑275 (MQ=255) aT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCa > 1:151552/1‑227 (MQ=255) gTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTaa < 3:151552/227‑1 (MQ=255) tCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAACCCTCGCTTACCGTGAATGTTGAGGTCg > 2:471369/1‑275 (MQ=255) ccccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatata < 6:68408/92‑1 (MQ=255) ccccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatata > 5:68408/1‑92 (MQ=255) ccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatat > 7:1014868/1‑89 (MQ=255) ccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatat < 8:1014868/89‑1 (MQ=255) cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatat > 5:817945/1‑88 (MQ=255) cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAatat < 6:817945/88‑1 (MQ=255) cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAgg > 7:728107/1‑122 (MQ=255) cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAgg < 8:728107/122‑1 (MQ=255) cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAACGCTCGCTTACCGTGAATGTTTAGGTCGGCAAg > 4:444579/1‑274 (MQ=255) | ATGATGCAGAAGCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGC‑TGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCG‑TAGTAAAGGGATCGAGTAAGTGATTAT‑CCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTACCTGCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGCATTTGTCAGCAATCTGAGTAACGTCGAATCGATTTTCTTAATCCCACATCAATTCACTTCCATTAATTCTCAAACATCCATGCCCAACGCTCGCTTACCGTGAATGTTGAGGTCGGCAAG > NC_000913/857319‑857846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |