| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,100,125 | C→T | 5.4% | T162T (ACC→ACT) | ycdY → | redox enzyme maturation protein (REMP) chaperone for YcdX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,100,125 | 0 | C | T | 5.4% | 737.1 / 21.4 | 220 | T162T (ACC→ACT) | ycdY | redox enzyme maturation protein (REMP) chaperone for YcdX |
| Reads supporting (aligned to +/- strand): ref base C (95/113); new base T (6/6); total (101/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.69e-01 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GTGCCGCCATATCGTAGCGCATGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTCCC > NC_000913/1099862‑1100368 | tgcCGCCATATCGTAGCGCATGGGTTGAGGGCGCGACGGACGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGACGCTTAGAGCGAAGCACTGGAAACCCTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAACGTGGGGGGCCATTCAACCACGCCTTTCTGGCCCACCC‑TTGCAccccca > 4:241992/1‑271 (MQ=255) cATGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCCGTGCGTATCCGTTCCCCTGGTGTGCTGCGTTCCTTTGCAACGTGGAGGCCCCTGCAACCCCGCCTTTCTGGCGCACCA‑TGCCACCGCTAACCCGCGATCCCCtt > 4:129352/1‑272 (MQ=255) cATGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGt > 2:192639/1‑275 (MQ=255) tGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTTGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCCCCA‑TGGCCCCGCAAACCCGCGTAGCCATTAGTg > 4:320132/1‑274 (MQ=255) ttggggggggcccggaagcggagaCGCGCCCCTGTCTTTCTGAGGGGTGGATGCCATTAGCGGTTAGGCCAGCCGATCACATCGGCACATTGCTTCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACAGTTCAGGGAGTATCTGTTACCCTAGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtg < 4:347522/263‑1 (MQ=255) tttctGGGGTAGGGATGCAATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCCCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAgt < 4:532945/274‑1 (MQ=255) ccATTAGCGGATAAGGAGGCCGATACAATGGGGAAATTGGTGCTCGCAGCTTCCTGGCGGGAAGGTCAGGAAACGGAAGATGAGGGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCAt < 4:7488/275‑1 (MQ=255) gggtaagCCAGCCGATGACACCGGCCCATTGCTGCTCGCAGCTTCCTAGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCCCTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATACAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCa < 4:411479/268‑1 (MQ=255) cacaTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgt < 1:2072/274‑1 (MQ=255) cacaTAGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgt < 2:484759/274‑1 (MQ=255) tgctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCt < 2:320133/275‑1 (MQ=255) gctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAACTGTTTGCt > 2:398752/1‑274 (MQ=255) cAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCAcc > 5:957064/1‑148 (MQ=255) aGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCg < 6:887567/148‑1 (MQ=255) tggctggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAAccc > 5:677267/1‑148 (MQ=255) tagcagaaaacgcggccatgaatgagatcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAAccc < 5:145924‑M1/21‑1 (MQ=255) ggctggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCcg > 8:562754/1‑148 (MQ=255) aaGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGc > 6:602403/1‑148 (MQ=255) tCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCAtt < 7:960116/148‑1 (MQ=255) gTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCa > 8:305883/1‑119 (MQ=255) cAACGGAAGATGAGAGCGAAGCACTGGAAACAGTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGc > 7:721171/1‑148 (MQ=255) cAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGc > 5:232968/1‑148 (MQ=255) cGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCAGCGATGCCATTAgatcgga > 5:376569/1‑142 (MQ=255) gATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAATGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATgcgc < 2:115577/275‑1 (MQ=255) atcgagcacacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATg < 5:668743‑M1/28‑1 (MQ=255) gagaGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTggg < 5:398412/145‑1 (MQ=255) gAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAt < 2:565454/134‑1 (MQ=255) cacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGCCATTAg > 8:1129154‑M1/94‑128 (MQ=255) cacattttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGCCATTAg < 7:1129154‑M1/35‑1 (MQ=255) aaGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGga < 7:562754/148‑1 (MQ=255) cACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAAcc < 6:1051675/110‑1 (MQ=255) ttttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATGc < 8:351795‑M1/28‑1 (MQ=255) aCTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaagaa < 7:782168/148‑1 (MQ=255) tttatgcaacaacaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATg > 7:676895‑M1/89‑116 (MQ=255) tGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAagaaga < 5:525895/148‑1 (MQ=255) gAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCa < 8:244235/96‑1 (MQ=255) aaaCACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGga < 7:299041/139‑1 (MQ=255) aaaCACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTc > 5:115877/1‑148 (MQ=255) acacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtg < 7:1024675/123‑1 (MQ=255) acacTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGAt > 5:792569/1‑144 (MQ=255) acTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAAt > 4:562413/1‑152 (MQ=255) acaaattatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGCCAt > 6:785351‑M1/78‑109 (MQ=255) ttCAGTGAGTATCTGTTAACCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATa < 2:108718/199‑1 (MQ=255) aGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCt < 4:112528/207‑1 (MQ=255) gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAgt > 6:1065663/1‑148 (MQ=255) gTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAgt > 8:847740/1‑148 (MQ=255) tatccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACCA‑TGGCACCGCTAACCCGCGATg < 5:191821‑M1/27‑1 (MQ=255) tGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCAtt > 6:979456/1‑103 (MQ=255) tGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATgcgc < 1:116570/243‑1 (MQ=255) ccgttgcagttatgagtgacgtagatcacacttattcttcagaatcttcttccagctcgtcccacattGCACTA‑TGGCACCGCTAACCCGCGAt < 5:1031902‑M1/26‑1 (MQ=255) aTCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTgg > 6:323318/1‑120 (MQ=255) aTCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGGTTCTga > 8:884002/1‑133 (MQ=255) aTCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga < 5:1061176/133‑1 (MQ=255) aTCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga < 7:884002/133‑1 (MQ=255) cTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTa < 6:313345/148‑1 (MQ=255) cTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTa > 7:552320/1‑148 (MQ=255) gTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCcgcg < 6:188973/86‑1 (MQ=255) gTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGgaagaa < 6:463730/121‑1 (MQ=255) ttACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCAtt > 5:561126/1‑93 (MQ=255) ttACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGga < 5:315557/116‑1 (MQ=255) ttACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga < 5:87729/128‑1 (MQ=255) tACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTa < 7:1051564/93‑1 (MQ=255) tACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTa > 6:719965/1‑144 (MQ=255) tACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTa < 5:719965/144‑1 (MQ=255) cTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAAtg > 7:233833/1‑97 (MQ=255) tggtgtggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTc < 6:673163/119‑1 (MQ=255) tggtgtggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga > 6:1010941/1‑122 (MQ=255) ggtgtggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGATGAtt > 8:741284/1‑117 (MQ=255) ggtgtggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATa < 8:1049619/127‑1 (MQ=255) gtgtggtgCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTg < 1:124331/152‑1 (MQ=255) ttCCTTGGCAAAGTGGGGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGAAGAGCTGGAAGACGANTCTGAAGAATAAGTGTGATCTACNNCACCAATANCTGCAACGGATAATttg > 3:30548/1‑156 (MQ=255) ttCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACgg > 7:900899/1‑148 (MQ=255) cacacttattcttcagaatcttcttccagctcgtcccacattGCACTAATGGCACCGCTAACCCGCGATGCCAtt < 6:513743‑M1/33‑1 (MQ=255) ttGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga < 6:118844/106‑1 (MQ=255) ggCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGAGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACCTACTTTCCTCTATTGCAATCAACACAGGCATTCTCTCCCGTTACTGGGGTTGGGTg > 4:99721/1‑275 (MQ=255) gCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAtt < 8:291203/147‑1 (MQ=255) gCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAAtt > 7:291203/1‑147 (MQ=255) aaaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgt < 8:552320/148‑1 (MQ=255) aaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGa > 5:33999/1‑139 (MQ=255) aaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgtt < 6:850421/148‑1 (MQ=255) aaGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGTTATCATGCGCGGCATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTATCTgggg < 2:99722/264‑1 (MQ=255) aGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TTGCACCGCTAACCCCCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTccc < 2:535913/275‑1 (MQ=255) cATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGc < 6:55677/73‑1 (MQ=255) cATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGAtt < 6:99022/85‑1 (MQ=255) cATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttg > 5:261260/1‑138 (MQ=255) cATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttg < 6:261260/138‑1 (MQ=255) gCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAgtg > 7:336475/1‑96 (MQ=255) gCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTc > 5:479630/1‑107 (MQ=255) cAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCTGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAAtgtg < 8:900899/148‑1 (MQ=255) ccACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGa > 7:858687/1‑95 (MQ=255) cGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTg < 7:616595/78‑1 (MQ=255) cGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTg > 8:616595/1‑78 (MQ=255) cGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCg < 6:232968/148‑1 (MQ=255) ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATa < 5:883667/118‑1 (MQ=255) ccTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgttg < 6:359927/129‑1 (MQ=255) cTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTga < 6:877432/76‑1 (MQ=255) tttCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCa < 8:174873/129‑1 (MQ=255) ttCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATaaa > 8:677509/1‑132 (MQ=255) CACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgt > 7:274918‑M1/1‑113 (MQ=255) CCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATttgttgt < 5:986275‑M1/114‑1 (MQ=255) | GTGCCGCCATATCGTAGCGCATGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCA‑TGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAAGTGTGATCTACGTCACTCATAACTGCAACGGATAATTTGTTGTTGCATAAAATGTGTGCTCGATCTCATTCATGGCCGCGTTTTCTGCTATCATGCGCGGCATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTCCC > NC_000913/1099862‑1100368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |