| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,761,623 | C→A | 6.6% | V640L (GTA→TTA) | yfjK ← | radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,761,623 | 0 | C | A | 6.6% | 766.3 / 28.7 | 223 | V640L (GTA→TTA) | yfjK | radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage |
| Reads supporting (aligned to +/- strand): ref base C (102/103); new base A (9/8); total (111/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.48e-01 | |||||||||||
Only 100 of 231 total aligned reads displayed.
ATCAATGTCGTCTAATACCGAGCGCGCGCCTGATAAACATCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGACTGAACGTATGGGGAACCAGTC > NC_000913/2761350‑2761892 | gtcgtcTAATACCGAGCGCGCGCCTGAAAAACATCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGCGTAACGTCTGAATGGGAATGCAAATCTATTCTAAGGCATTGACACCTGGTGGTAGCTGGAAACTTTCGAAAGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgtg > 2:33948/1‑274 (MQ=255) aGCGCGCGCCTGATAAACATCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACAAGNCGGTGTAACGTCTGAATGGGAATGCCAATCTATTCTAAGGCATTGACACCTGGTGGGAGAGGGACACTTNCGAACGCCAATTTCACAT‑GTGTGTAACCGCCTTTGCTGCGTTTACNANCCTTTACAGCGTGGTTTTTAAccttttt > 3:51960/1‑269 (MQ=255) cgcgcgcCTGATAAACATCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTGTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACAtcct > 4:503306/1‑275 (MQ=255) aaCATCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGa < 2:350611/274‑1 (MQ=255) tCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTAACGCGTGGTGTTTAACTACATCCTCAATCAAGCTGAGAAcc > 4:32568/1‑275 (MQ=255) acAACGTAACCAATCGATCTACTCCAAAGGTTCCACGTACCACCAAGAGACTGGCTCAAACTATCCACCTCATCCTCCTCGGAAAAATTCAGCTAGGCTACCCGACGTGGTAACGTTTTAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATCGTAACTTTCGAACGCCAATTTGACAG‑GTGTGTAATCGACTTTGCTGCGTATACCACGCGTTACAGCGTGGTGTTTAACTACATCCTTCATCAAGCTGAGCACCTtatg < 4:205795/274‑3 (MQ=255) tACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGt > 2:313581/1‑275 (MQ=255) tCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCCCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCg < 4:386155/275‑1 (MQ=255) cGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGTCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGGCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATCTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCg < 2:274123/274‑1 (MQ=255) ccAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGttt > 4:157917/1‑219 (MQ=255) ccAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGNAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGNGGTTTAACTACATCCTCACTCAAGCTGAGCNNCTAAGGTGGGGTATAGCCGATGGTATTgg > 3:71959/1‑275 (MQ=255) aTGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACt < 2:157918/219‑1 (MQ=255) aTGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTAt < 1:71959/268‑1 (MQ=255) ccTGAGTATCCCGAAGATACTGGCCCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGCAGTGCCAATCTCTTCTAAGGCATTGACACCTGGTGGGAGTTGGANACTTTCGAACGCCAATTTGACAT‑GTTTGTAATCGCGTTTGCTGCGTATACCACGCTTTACCTCGTGGTTTTTCACTACATNCCCCATCCCGCTGAACACCTTAGTTNAGGGATAGCCGACGGTCTTGGTTATggat > 3:99504/1‑272 (MQ=255) cTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGc > 1:45687/1‑208 (MQ=255) aaCTAACCCACAACAGCCTCTTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATTCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACGTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCGGCGTATACCACGCTTTAAAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGa < 4:152591/275‑1 (MQ=255) gCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAggg > 2:491034/1‑253 (MQ=255) cgtcgGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAAt < 4:491033/253‑1 (MQ=255) tcgGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTc > 2:289626/1‑275 (MQ=255) ggAAAATTCCAGCAAGTCTACCAGTCGTGGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTTGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTATGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAg < 2:218368/275‑1 (MQ=255) ccAGCAAGGCTACCAGTCGGTGTAACGTCGGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCa < 2:32569/274‑1 (MQ=255) agtaaatCTGCCAATAGGTTTAACGTCTGAATGGGAAGGCCAAACTAATCTAAGGCATTGAAACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGAAAT‑GTGTATAAGCGACTTGGCTGCGTATACCTCGCTTTACTGCGTGGTGTATAACTACATGCTCCGTCAAGCTGGGCAACTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGGGCTTCAAATCATTGTAGTGGGCGATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTg < 4:33947/269‑1 (MQ=255) aGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgtggt < 6:1041177/148‑1 (MQ=255) gCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTGTAAAGCgt > 8:543671/1‑144 (MQ=255) gCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTGTAAAGCgt < 7:543671/144‑1 (MQ=255) tCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGc > 1:109214/1‑275 (MQ=255) ccAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTGTAAAGCgt < 7:1046095/135‑1 (MQ=255) gTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGc < 8:453716/148‑1 (MQ=255) tCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgt > 6:878406/1‑120 (MQ=255) gAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAg > 2:556093/1‑205 (MQ=255) gAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGa > 2:409659/1‑275 (MQ=255) aaTTGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGGATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAg < 1:99504/273‑1 (MQ=255) gggAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCAcc > 7:839117/1‑148 (MQ=255) gggAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAg < 4:409658/270‑1 (MQ=255) aaTGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCt > 7:612734/1‑146 (MQ=255) aTCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTtaggtagg < 7:2715/147‑1 (MQ=255) tctcTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGgtgt > 5:1030786/1‑107 (MQ=255) tctcTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGa > 4:334420/1‑260 (MQ=255) tctcTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTGTAAAGCgt < 7:972121/102‑1 (MQ=255) ttctAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATAtt < 2:334421/260‑1 (MQ=255) tctAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATc > 3:151160/1‑239 (MQ=255) aGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATc < 1:151160/239‑1 (MQ=255) aGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACtt > 2:56624/1‑275 (MQ=255) cATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgt < 6:47680/90‑1 (MQ=255) ttGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑TTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAAt > 4:274957/1‑274 (MQ=255) ttGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTAc > 7:629343/1‑83 (MQ=255) ttGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTTCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGACGGCAATGGAAAGAGTACGTTTCTACCCTTCAGAAATCCACTTGAGTTAATAATCGATCTGATTTTTCAGATTTTCCGAATACCTTCAAGCACTTAAAt > 4:475200/1‑274 (MQ=255) ttGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTtaggtag > 4:239065/1‑131 (MQ=255) gACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCTACTTTGCTGCGTATACCACGCTTTACAGCGTGCTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTg < 8:839117/148‑1 (MQ=255) acacCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGa > 7:165289/1‑139 (MQ=255) canCTGGNGGTAGATGGANACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCa < 4:557901/211‑1 (MQ=255) cacCTGGTGGTAGATTGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCa < 4:358768/211‑1 (MQ=255) ccTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTa < 6:259516/94‑1 (MQ=255) cTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACCGCgtgg < 6:549130/83‑1 (MQ=255) cTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgtgg > 5:549130/1‑83 (MQ=255) tggtggTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTAtt > 5:1107611/1‑141 (MQ=255) tggtggTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTAtt < 6:1107611/141‑1 (MQ=255) gATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGaa < 8:615018/127‑1 (MQ=255) gATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCa < 8:570418/147‑1 (MQ=255) aTGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGa > 4:367641/1‑275 (MQ=255) tGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTGTAAAGCgt > 6:723369/1‑70 (MQ=255) gAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgt < 8:144959/68‑1 (MQ=255) gAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCAcc < 8:223192/103‑1 (MQ=255) gAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTta > 5:87805/1‑106 (MQ=255) gAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTAtt < 5:484473/129‑1 (MQ=255) aaaCTTTCGAACGCCAATTT‑TCATGGTGTGGAATCGACGTTCCTGCCTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCGGAGCACCTTAGGTAGGGAATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCAt < 4:30179/275‑1 (MQ=255) aaCTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTtaggtag > 7:456341/1‑109 (MQ=255) aaCTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTtaggt > 7:947727/1‑107 (MQ=255) aaCTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTtaggt < 8:947727/107‑1 (MQ=255) aCTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgt < 7:185295/65‑1 (MQ=255) aCTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgt > 8:185295/1‑65 (MQ=255) cTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGa < 2:367642/274‑1 (MQ=255) cGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACCTcc > 2:514761/1‑275 (MQ=255) gAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCg < 4:289625/275‑1 (MQ=255) cAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCgtgg < 7:219630/47‑1 (MQ=255) t‑gtgtgTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGAc > 2:202412/1‑275 (MQ=255) gtgtAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTtaggta < 7:442785/82‑1 (MQ=255) gtgtAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTTCGATCATGACa > 1:23051/1‑252 (MQ=255) tAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGttt > 5:439097/1‑44 (MQ=255) aaTCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGtat > 5:357254/1‑84 (MQ=255) cGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGa < 2:181294/275‑1 (MQ=255) gACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGAc > 2:462525/1‑275 (MQ=255) accttGCTGCGTAGACCACGCTTTACAGCGTGGGGTTTAACTACATCCTCAATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCTCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGAACTTAAATAGCGGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGAGACCCCATTGCGAc > 4:423951/4‑274 (MQ=255) aCTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGAAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGAc > 2:280704/1‑274 (MQ=255) ttGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGa < 7:357326/58‑1 (MQ=255) ttGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGa > 8:357326/1‑58 (MQ=255) ttGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAg > 7:675317/1‑84 (MQ=255) ttGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAg < 8:675317/84‑1 (MQ=255) cGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAg > 2:478773/1‑250 (MQ=255) cGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGACTGAACGTATg < 4:462524/275‑1 (MQ=255) ataCCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCtt < 6:418309/92‑1 (MQ=255) aCGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCAttgttg > 8:216925/1‑100 (MQ=255) aCGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGa < 5:17648/101‑1 (MQ=255) aCGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGa > 6:17648/1‑101 (MQ=255) aCGCTGTAAAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGtt < 8:387356/122‑1 (MQ=255) cGCTTTACAGCGTGGTGTTTAACTCCATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGACTGAACGTATGGGGAACCAg < 4:161758/275‑1 (MQ=255) cGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCAt < 5:96423/94‑1 (MQ=255) cGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCAt > 6:96423/1‑94 (MQ=255) tttACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATAATGACATCCGTAGGCTTAAAAGGGACCCCATTGCGATTGAACGTATGGGGAACCAGTc > 4:183079/1‑274 (MQ=255) cAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGtt < 5:894906/114‑1 (MQ=255) | ATCAATGTCGTCTAATACCGAGCGCGCGCCTGATAAACATCTGATCAACGTACCCAATCGATCTACTCCAAATGTCCTGAGTATCCCGAAGATACTGGCTCAACTCATCCACATCAGCCTCGTCGGAAAATTCCAGCAAGTCTACCAGTCGGTGTAACGTCTGAATGGGAATGCCAATCTCTTCTAAGGCATTGACACCTGGTGGTAGATGGAAACTTTCGAACGCCAATTTGACAT‑GTGTGTAATCGACTTTGCTGCGTATACCACGCTTTACAGCGTGGTGTTTAACTACATCCTCCATCAAGCTGAGCACCTTAGGTAGGGTATAGCCGAAGGTATTGGTTATGAGCTTCAAATCATTGTTGAGGGCAATGGAAAGAGTACGTTTCTCCCCTTCAGAAATCCACTGTCGTGCATAATCGATCTGATTTTTCAGATATTCCGAATAACTTTCAGCACTTAAATAGCCGGCAAGTTTTGCGATCATGACATCCGTAGGCTTAACAGGGACCCCATTGCGACTGAACGTATGGGGAACCAGTC > NC_000913/2761350‑2761892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |