| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,477,878 | T→A | 7.7% | intergenic (+20/+29) | slyX → / ← slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,477,878 | 0 | T | A | 7.7% | 156.6 / 6.1 | 54 | intergenic (+20/+29) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| Reads supporting (aligned to +/- strand): ref base T (23/26); new base A (2/2); total (26/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-04 | |||||||||||
TCCGCGGCGACCATTCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCA > NC_000913/3477607‑3478145 | tCCGCGGCGACCATTCGCCAAAAGAGGTGAATCATGCAGGATTTATCAGTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTCCGTGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATAAAAGGGAGATGGCGAAACTGCGCGAGCATCTGCCTCTGCTGACGGAGATGTTAAAAACCAGCTAGCCGTCGAACATCCCGACCGA‑TGTTCAAGACACGCCACCGCAACACACTTAAGGACTAAAAAAAACGGGGAtac > 4:514551/1‑272 (MQ=255)tCCGCGGCGACCATTCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCAAAGTATTGAGGCGTAAAAAAAGCGGGGATTc > 2:284720/1‑274 (MQ=255) tGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGGGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGgca < 2:85904/275‑1 (MQ=255) tGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTTAGGAGTAAAAAAAGCGGGGGTTCCACGCTTTTTTGTCACTTTTT‑CGGTATTAGTGTCAACCCCAACCGCCAtt > 1:105781/1‑275 (MQ=255) tGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGtt > 2:366256/1‑275 (MQ=255) tGGAAGCACGCCTGGCAGAGCTGGAGAGCCGAATGGCTTTTCAGGAAATCACCATTGAATAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGAACGAGAAGTNAAAAGCCAGCAACCCGTCGAACATCGACTAGCA‑GGCTGAAGAAACGCCACCGCCAACATAATGAGGAGTAAAAAAAGCGGGGATTCACCGATCTTTTGCCACTTTTN‑c > 3:110784/1‑247 (MQ=255) aGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCCCGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTACAAGCCAGCCAGCCGTCGAACATCCCGTCGCA‑GGCCACATAAACCCCACCCCCACATTATTCAGGCCTACAAAACCCCGGGACTCCCCGCTTTTTTGGTCCTTTTT‑CTGTATTAGTGGCAACCCCACCCCCCGTTGccc > 4:516335/1‑274 (MQ=255) tgtgaagagCGGGATGGCCGCTTGCCTTTTCAGGAAATCCCCCTTTAATAACTGAACGTCCCGGTGACCGGCCATGAAATGGAGCTGGGGAACCTGCTCCATCATCTGCGTCGGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGc < 4:404958/270‑1 (MQ=255) gCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCca > 2:472254/1‑274 (MQ=255) gCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAACAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCCACCGCAAACCCCTTTGCCTTTTCCGcccccgccc > 4:105008/1‑268 (MQ=255) aCTGGCTTTTCAGGAAATCACCATTGAAGAACTGCACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTCAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTATGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGGTCCCTTTACCGCCACAGCAGCCTTAGcacccg > 2:439645/1‑270 (MQ=255) cgggtatttCAGTAATACGCCATTGGANNCATGAACGTCACGGTGCGTGATCATGAAAGNGAGAGGGCGAAACTGCGCGTTCATCTGCGTCTGCTGACCGAGAAGTAACAAGCAAGCCAACCGTCAACAATCGANTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCAcc < 3:57955/267‑1 (MQ=255) taaCCATTGAAGAACGGAACGTCACGGTGACCGCTCATGAAATGGAGAGGGCGAAACTGCGCGATCGTCTGCGTCGGCTGACCGGGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATc < 2:4103/273‑1 (MQ=255) cGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCCGGACCGCCgcag > 1:9147/1‑275 (MQ=255) tGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACcgtc > 2:272381/1‑275 (MQ=255) taCCGCTCATGAAAGGGAAATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACcgtcg < 2:105009/274‑1 (MQ=255) gccgtcccttGAAATTGGCATGGCGAAACTGCCTGACCATCTGCGTCCGCTAGCCGAGAAGTTACAACCCCGCCTGCGGTCGAACTCCGCTTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGAATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACcgtcg < 4:284719/266‑1 (MQ=255) aTGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTAACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAACCGCCACCGCAACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggtcgt < 2:271561/274‑1 (MQ=255) agaTGGCGAAACTGCGCGTTCATCTGCGGCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCGGAAGAAACGCCACCGCCACATTATTGATGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCgtggtg < 1:157600/275‑1 (MQ=255) ggCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACCGCCGCCTTCGCCACCCTGTTCATGCCCGTGACCGTGGCCATTGCCGCCGCGCCAACACTCCTGTGCGTGATAgtgtgtgtga > 4:532336/1‑268 (MQ=255) ggCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGCGATCGTCGCCATGACCGCCGCCGACACCGTCGGTGTCGGGATCGTGGTGGTGa > 4:70426/1‑275 (MQ=255) tcTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGgcaacc > 2:560314/1‑148 (MQ=255) cGTCGGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGgcaaccgcaa < 4:560313/148‑1 (MQ=255) tCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGc > 6:1045971/1‑109 (MQ=255) tCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGc < 5:1045971/109‑1 (MQ=255) tCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACAGCCGTTGCCTTTACCCCCACCGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATTACCGCCGCACACACCGACCGGGTCGTGATCGTTGTGGGTATCGTGCGCGCCGTGAACGTGAACa > 4:116046/1‑275 (MQ=255) tacgggaaaGTCAAAAGCCAGCCAGCCGCCGAACATCGCGTCGCA‑GGCGGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGGGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGcc < 2:532337/268‑1 (MQ=255) gACCGGAAAGTTAAAGGCCAGCGGGCCGTGGACAAGAGGGTCGAA‑GGCTACGGAAACGCCACCGCCACATAATTGGGGCGTAAAAAAGGCGGGGGTTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCACCCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGcc < 4:131703/275‑1 (MQ=255) gACCCAGAAGGTACAAGCCAGCCAGCCGTCGAACAGCGCGTCGCA‑GGCTGAAGAACCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGcc < 1:142952/275‑1 (MQ=255) ccgggaaagggaaagGCCGGCCNNCCGTGNGACAACGCGCCGCACCGATGAGAAACCGCACCCGCACCTTTATTGTGGGCGAAAAAAAGCGGGTGTCCCCCGCTTTTTTTTCACTTTTT‑GGGTAGTGTGGGAAACCGCAACCGCCGTTGCCTTTCCCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGcc < 3:9147/264‑1 (MQ=255) gaAGTAAAAAGCCATCCAGCCGTCGAACATCGCGTCGCA‑GGCGGAAGAAACGCAACCGCAACATTATTGGGGCGTAAAAAAGGCGGGGATTCCCCGCTTTTTTGTCACTTTTG‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGttc < 2:70427/274‑1 (MQ=255) gccagccagccGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCtt < 8:770350/89‑1 (MQ=255) gccagccagccGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCtt > 7:770350/1‑89 (MQ=255) ccagccagccGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAt > 8:654102/1‑79 (MQ=255) ccagccagccGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAt < 7:654102/79‑1 (MQ=255) cGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAACAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGc < 1:110784/275‑1 (MQ=255) cGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTAtt > 2:8774/1‑85 (MQ=255) ggCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTg < 4:8774/85‑1 (MQ=255) aaaaaaaCG‑CACCGCCAAATAAGTGAGGCGAAAAAAAAGCGGGTATTCCCCCCTTTTTTGTGACGTTGT‑AGGTATCAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTGCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAAttt < 4:340873/271‑1 (MQ=255) aagaaACCCCACCCCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCTGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAAttt < 2:116047/275‑1 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATAACCGTAATCGTGGCCAGGACCGCCGCAGCAACCATCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAAGGTGACCATGAGCCAGTTCTTCTTCGTTCGCCTCGCGCATCGCCAACACTTCAACGTTGAATTTCCGGtt > 1:103054/1‑275 (MQ=255) caTTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTCTTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCGTGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCCCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGATTCCCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGCCCGGCCa > 2:495774/1‑275 (MQ=255) attGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCAGCGTGTTCATGACCGGGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCAt < 2:50158/275‑1 (MQ=255) tgggggCGTAAAAAAAACGGGTGTTCCCTGCTTTGTGTGCAGTTTTT‑AGGTATTAGTGGAAACCCAAACCGCCGTTGCTCTGACGGCCACAGCATCCTCCGCCCCCGTGTTCATGACGGTGATGGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTTATCGTGGTGGTGATCGGGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCAtg < 4:120806/271‑1 (MQ=255) ggtgTAAAAAAACCGGGCATCTCCCGTTTTTTTGT‑ACTTTTTCCGGTATTATTGGCAACCGGAACCGCCGTTGCCTTTCCCGCCACAGCAGCCTTCGCCACCGGGGTCATGACCGGGGTCGTGGCCTGGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGt < 4:259043/272‑1 (MQ=255) gCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTAGCAACCGCAACCGCCGTTGCCTTTACCTCCACAGCATCCTTCGCCACCGCTTTCATGACCGTGCACGTGGCCATGACCGCCGCAGCAACAGTCGTGGCCGTCATCGTGGTGGTCAGCGCGCGCCCCGTGAACCTGACCATGCGCCAGTTCTCCTTCAGTCGCCTCTCGATTCCCCACAACTTCAACGTTACCTTCCAGGTTCTGCCccgcccgccactcgt > 4:441502/1‑267 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGAACGGCCAGCCTGGTGTTa > 2:300325/1‑275 (MQ=255) tAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGAGCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCCCAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGGGGTTAcc > 2:324293/1‑275 (MQ=255) aGCGGGGAATCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggt > 5:948366/1‑141 (MQ=255) aGCGGGGAATCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggt < 6:948366/141‑1 (MQ=255) gCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCa < 1:41349/275‑1 (MQ=255) gggATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCt > 6:956173/1‑79 (MQ=255) gggATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGCTGCCTTTACCGCCACAGCACCCt < 5:956173/79‑1 (MQ=255) ggATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCaa < 5:1097255/126‑1 (MQ=255) ggATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCaa > 6:1097255/1‑126 (MQ=255) aTTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCa > 5:123878/1‑109 (MQ=255) aTTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCa < 6:123878/109‑1 (MQ=255) | TCCGCGGCGACCATTCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCA‑GGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTT‑CGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCA > NC_000913/3477607‑3478145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |