| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,307,298 | G→A | 17.2% | P168S (CCC→TCC) | alsK ← | D‑allose kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,307,298 | 0 | G | A | 17.2% | 330.8 / 60.0 | 134 | P168S (CCC→TCC) | alsK | D‑allose kinase |
| Reads supporting (aligned to +/- strand): ref base G (58/53); new base A (12/11); total (70/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.54e-01 | |||||||||||
Only 100 of 149 total aligned reads displayed.
ACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTT‑TCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTT > NC_000913/4307057‑4307570 | cccAGGACCACCGCATCGGGATTGAACAGATTAATGCTGGTGGCAATGGCCCTTGCCGCGTTT‑TCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGTCTGTTTTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCa < 1:831/275‑1 (MQ=255) aTCACCGCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTT‑TAAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATACCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGgcgc < 2:283342/275‑1 (MQ=255) aaCAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTT‑TCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAGTGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCCTTCCAGAGCAATTGGTTTCCAGGAACCCAGGATTGCCACA‑CGCGCAGTGTTGGGCCATATCTCCCAGGGGGCTGTGACCCCGTTCGCCTGCCACACCGTGTCCACCCGTCCAAGGCGCACCGTTCATCcacccct > 1:64439/1‑270 (MQ=255) gtggCAATGGCCCGTGCCGCGTTT‑TCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTACCACA‑CGCCCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCAAGTTGGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTAATCCCCACTGCGAACCCCAACCCCg > 1:4157/1‑274 (MQ=255) tggCAATGGCCCGT‑CCCCGTTTGTCAAGTCGGCCTTGGACGAAAGGGGCGTTTGCCGCATGGGGCAAAAAAGCGCGACAGGGGTAATTTCGTGGCTGTTGTTCGTACCAGCGTCTGAGCGCCATTCCGGAGCAATTGGTGTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTa < 4:368479/275‑1 (MQ=255) ttt‑tCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCCCA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCAt > 2:473333/1‑230 (MQ=255) gggACGAAAGGGGCG‑TTTCCGCATGGACGAAAGGATCGCGCAATGGGTAATTTCGGGGCTTTTGTTCGTACCAGCTCCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg < 2:430957/274‑1 (MQ=255) aaGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCcac > 4:158685/1‑212 (MQ=255) ggCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTg < 2:158686/212‑1 (MQ=255) gTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 2:417239/275‑1 (MQ=255) tttCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACTCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCCCCCTGGGAGATATg < 6:1028455/148‑1 (MQ=255) ttCCGCATAGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCCCCCTGGGAGATATGa < 6:969776/148‑1 (MQ=255) aCGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGc < 6:746517/148‑1 (MQ=255) aaaaGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTg > 5:27812/1‑148 (MQ=255) gTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGa < 6:1073161/113‑1 (MQ=255) gTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGa > 5:1073161/1‑113 (MQ=255) aaTTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGt > 6:908900/1‑148 (MQ=255) gggCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCacac > 2:185340/1‑165 (MQ=255) ttgttCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCg > 7:177610/1‑148 (MQ=255) ttCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTc < 8:486633/148‑1 (MQ=255) cAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAggggg > 5:1020314/1‑87 (MQ=255) aGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCa > 5:473432/1‑141 (MQ=255) aGCGTCTTAGCGCCATGCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCa < 6:473432/141‑1 (MQ=255) gCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGAc < 8:745142/92‑1 (MQ=255) gCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGAc > 7:745142/1‑92 (MQ=255) tCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACg > 8:708041/1‑125 (MQ=255) tCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACg < 7:708041/125‑1 (MQ=255) tAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGa > 7:437624/1‑85 (MQ=255) tAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGa < 8:437624/85‑1 (MQ=255) tAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAAc > 5:562660/1‑148 (MQ=255) gcCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCg < 7:448999/102‑1 (MQ=255) ccATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGa > 7:557774/1‑75 (MQ=255) ccATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCCCCCTGGGAGATATGa > 7:909748/1‑80 (MQ=38) aTTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCgtg < 5:913263/101‑1 (MQ=255) ttCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTCCACCCGTCCACGGCGCACCGTTCATCCAAACTGCGAACCCCTTCCCCGTACCGAGATAGGCCACCAGGACCAGTTGTTGCGTAAGGCGGTTTCACAATGCGTCCCAGAGCAGTTACCGGCAAATCGCGCGGGAAAGCACCACCGGACTCTTCAGGCTATTTCCAAGCTTacct > 4:260099/1‑272 (MQ=255) gagCAATTGGTTTCCAGGCACCCAGGATTGCCAAA‑CGCGAAGTGTTGGGTCATATCTCCAAGGGGGATATGGCCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCgag < 2:7458/275‑1 (MQ=255) agCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTAcc > 8:1054041/1‑148 (MQ=255) aTTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCgaga < 7:1054041/148‑1 (MQ=255) tGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCa > 8:882908/1‑92 (MQ=255) tGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCg > 8:1106480/1‑143 (MQ=255) ggTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAggggg > 7:1014645/1‑58 (MQ=255) tttCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCgtg < 5:124431/85‑1 (MQ=255) tttCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCgtg > 6:124431/1‑85 (MQ=255) tttCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGgc < 8:413636/148‑1 (MQ=255) tCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCgt < 8:1042931/82‑1 (MQ=255) agggccccAGTATTG‑CACACCGCGCCGTGTTGGGTCATATCCCCCAGGGGGATAGACCCCAGTCCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATccg < 4:129307/269‑1 (MQ=255) cccAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGa < 7:186065/145‑1 (MQ=255) ccAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCCCCCTGGGAGATATGAc < 7:989088/52‑1 (MQ=18) cAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGcc < 8:525671/61‑1 (MQ=255) cAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGcc > 7:525671/1‑61 (MQ=255) cAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAg > 7:875706/1‑148 (MQ=255) aGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATcc < 6:270207/101‑1 (MQ=255) ggATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTTCCAGGAGAGTTGCAGGTTACAGTCGCGGGAAAACTCAACCGGACAATTTAGCGTATTTTCGCGCTTATCGGCGCGACCATATAAATCCGCCGCTGTTaa > 2:394992/1‑275 (MQ=255) gATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgttg < 6:562660/148‑1 (MQ=255) aTTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgttgt < 5:908900/148‑1 (MQ=255) aTTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgttgt < 6:802576/148‑1 (MQ=255) ttGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgttgtt < 8:177610/148‑1 (MQ=255) caca‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGt > 8:17300/1‑47 (MQ=255) ca‑cGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGaa > 7:1076045/1‑133 (MQ=255) cgcAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAgg > 6:28711/1‑120 (MQ=255) cgcAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAgg < 5:28711/120‑1 (MQ=255) cgcAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAg < 6:1020246/119‑1 (MQ=255) cAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCgaga > 7:827621/1‑114 (MQ=255) cAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgttgt > 5:766839/1‑135 (MQ=255) gtgtTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAg > 6:823654/1‑129 (MQ=255) gtgtTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAg < 5:823654/129‑1 (MQ=255) gtgtTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCAGCCGCTGTTAACGGCAGGTTAGGCGTAg > 2:66955/1‑275 (MQ=255) gTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGgccg > 8:95872/1‑112 (MQ=255) tCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATc > 6:1003412/1‑92 (MQ=255) tCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATc < 5:1003412/92‑1 (MQ=255) tCATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATa > 5:1100344/1‑106 (MQ=39) tCATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATa < 6:1100344/106‑1 (MQ=39) cATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATcc < 8:684445/92‑1 (MQ=255) cATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTc < 7:144899/141‑1 (MQ=255) cATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACg > 6:583110/1‑148 (MQ=255) tatCTCCCAGGGGGATATGACCCAGTTCGCTTGCCACACCGTGTGTACCCCTCCCCGGCGCACCGTTCATCCACACTGCGCACCCCATCCCCGTACCTAGACAAGCCGCCTCAACCGGTTGTTTCGCAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCCGTTTAACGTCGCGGGAACACTCTTCAGGTCACTTCCCTGTACTTGCGAGCTTATCTGCGAGAGCACATAAGTCCGCCGCTGTTCACGGCAGCGTACGCGTaataaatatgtga > 4:524449/1‑263 (MQ=255) tatCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATg > 4:189713/1‑272 (MQ=255) tatCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGACCTTATCGGCGAGATCATATAAATCCGCCCATGTTAACGGCAGGTTAGGCGTAGAcatacttggt > 4:460136/1‑269 (MQ=255) tatCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCa > 6:483764/1‑69 (MQ=38) tctcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgttg > 8:201585/1‑119 (MQ=255) tctcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTccc > 5:629118/1‑148 (MQ=255) tcccccTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTccc > 7:982698/4‑148 (MQ=255) ttcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa > 5:812042/2‑148 (MQ=255) ctcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa > 8:29677/1‑148 (MQ=255) ctcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCa > 5:502906/1‑148 (MQ=255) ccccTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCAt > 7:282545/2‑66 (MQ=39) cccTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAgg < 6:8767/148‑1 (MQ=255) cccAGGGGGATATGACCCAGTTCTCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAgg < 8:793187/148‑1 (MQ=255) cccAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAgg > 5:119762/1‑148 (MQ=255) ccAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATa > 7:392137/1‑97 (MQ=255) cAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGt > 6:455172/1‑128 (MQ=255) cAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGgag < 8:875706/148‑1 (MQ=255) tgggagATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCcac < 7:918255/65‑1 (MQ=255) tgggagATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCcac > 8:918255/2‑66 (MQ=255) gggggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGttt < 5:458049/128‑1 (MQ=255) gggggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGt < 6:1044221/126‑1 (MQ=255) gggggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGt > 5:1044221/1‑126 (MQ=255) gggggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc < 8:1141413/140‑1 (MQ=255) gggggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc > 7:1141413/1‑140 (MQ=255) ggggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCt > 2:330960/1‑274 (MQ=255) | ACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTT‑TCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACA‑CGCGCAGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTT > NC_000913/4307057‑4307570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |