| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 813,575 | Δ1 bp | 5.7% | coding (50/2022 nt) | uvrB → | exision nuclease of nucleotide excision repair, DNA damage recognition component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 813,575 | 0 | A | . | 5.7% | 317.6 / 12.5 | 87 | coding (50/2022 nt) | uvrB | exision nuclease of nucleotide excision repair, DNA damage recognition component |
| Reads supporting (aligned to +/- strand): ref base A (42/40); new base . (2/3); total (44/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01 | |||||||||||
ATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCC > NC_000913/813444‑813720 | aTCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGa > 2:94894/1‑148 (MQ=255) tCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGAc > 2:1106067/1‑148 (MQ=255) taATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGa < 1:1106067/148‑1 (MQ=255) gCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTg < 1:94894/148‑1 (MQ=255) aTTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAggg < 4:1126168/139‑1 (MQ=255) aTTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAggg > 3:1126168/1‑139 (MQ=255) aaaaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAg < 2:468518/131‑1 (MQ=255) aaaaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAg > 1:468518/1‑131 (MQ=255) ccTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAag > 3:873624/1‑108 (MQ=255) ccTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAag < 4:873624/108‑1 (MQ=255) cTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTgg > 4:1133759/1‑128 (MQ=255) cTGCCCGCCCAACACCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTgg < 3:1133759/128‑1 (MQ=255) cAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCTGATC‑GCCagaag > 3:724810/1‑78 (MQ=255) cAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCTGATC‑GCCagaag < 4:724810/80‑3 (MQ=255) cAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGa < 4:249533/128‑1 (MQ=255) cAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGa > 3:249533/1‑128 (MQ=255) aaCTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGa > 2:1059614/1‑142 (MQ=255) aaCTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGa < 1:1059614/142‑1 (MQ=255) aCTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCa < 3:825786/121‑1 (MQ=255) aCTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCa > 4:872878/1‑121 (MQ=255) aCTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCa < 3:872878/121‑1 (MQ=255) aCTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCa > 4:825786/1‑121 (MQ=255) aCTCCTTCAGGTAGCGACTCATGAATAAACCGTTCAAACTGAATTCCGCTCTTACACCTTCTGGC‑GATCAACCAGAGGAGATTCAACGTCTCGAAGAGGGGCTGTAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTc > 4:708579/1‑148 (MQ=255) ccTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCt < 1:622121/100‑1 (MQ=255) ccTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCt > 2:622121/1‑100 (MQ=255) ttCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAggg < 3:468927/95‑1 (MQ=255) ttCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAggg > 4:468927/1‑95 (MQ=255) ttCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGa > 2:748129/1‑148 (MQ=255) tCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCTGATC‑GCCagaagg < 2:852663/73‑4 (MQ=38) tCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGtc > 2:499747/1‑84 (MQ=255) tCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGtc < 1:499747/84‑1 (MQ=255) aGGTAGCGGCTCATGAGTAAACCGTTCAAACTGAATTCCGATTTTAAACCATCTGGC‑GATCAGCCAGAGGCGATACGACGTCACGAAGAGGGGCTGGAAGATGGCCTGGCTCACCAGACGTTTCTTGGCGTGCCTGGCTCAGGGaaaa < 3:708579/148‑1 (MQ=255) cATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCAtt > 1:1114031/1‑148 (MQ=255) tGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGa < 1:759705/60‑1 (MQ=255) tGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGa > 2:759705/1‑60 (MQ=255) tGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAATCtt > 4:355518/1‑139 (MQ=255) tGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCtt < 3:355518/139‑1 (MQ=255) gTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAg < 4:359746/47‑1 (MQ=255) gTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAg > 3:359746/1‑47 (MQ=255) ccGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGAt > 4:1020953/1‑81 (MQ=255) ccGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGAt < 3:1020953/81‑1 (MQ=255) ccGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCa < 1:482736/120‑1 (MQ=255) ccGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCa > 2:482736/1‑120 (MQ=255) ccGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTc > 1:1052408/1‑132 (MQ=255) ccGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTc < 2:1052408/132‑1 (MQ=255) cGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTgg < 4:1133553/106‑1 (MQ=255) cGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTgg > 3:1133553/1‑106 (MQ=255) cGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCAt < 2:1114031/148‑1 (MQ=255) ttCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaaa < 2:953156/124‑1 (MQ=255) ttCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaaa > 1:953156/1‑124 (MQ=255) aCTGAATTCCGCTTTTAAACCTTCTGGCTGATC‑GCCagaa < 1:1003941/40‑2 (MQ=18) aCTGAATTCCGCTTTTAAACCTTCTGGCTGATC‑GCCagaa > 2:1003941/1‑39 (MQ=18) aCTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTgg > 2:260777/1‑80 (MQ=255) aCTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTgg > 2:702388/1‑80 (MQ=255) aCTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTgg < 1:702388/80‑1 (MQ=255) aCTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTgg < 1:260777/80‑1 (MQ=255) aCTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGAc > 1:687192/1‑148 (MQ=255) ttCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCa > 2:566141/1‑119 (MQ=255) ttCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCa < 1:566141/119‑1 (MQ=255) tCCGCTTTTAACCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaata < 4:783694/112‑3 (MQ=255) tCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaaa > 3:783694/1‑112 (MQ=255) tCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaaa > 3:590934/1‑112 (MQ=255) tCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaaa < 4:590934/112‑1 (MQ=255) tCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATAGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTACTGACCTTCAgc > 3:923837/1‑148 (MQ=255) gCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAgcgc < 3:143037/147‑1 (MQ=255) gCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAgcgc > 4:143037/1‑147 (MQ=255) cTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGccc > 1:727593/1‑148 (MQ=255) aaaCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCa < 2:687192/148‑1 (MQ=255) aaCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaa > 4:241515/1‑101 (MQ=255) aaCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGaaa < 3:241515/101‑1 (MQ=255) aCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCtt > 2:793678/1‑105 (MQ=255) aCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCtt < 1:793678/105‑1 (MQ=255) aCCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATg < 2:727593/148‑1 (MQ=255) ccTTCTGGC‑GATCAGCCAGAGGCGGTTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTAGCTCTGGGAAAACCTTCAGCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATgg > 3:330184/1‑148 (MQ=255) cTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGt < 4:923837/148‑1 (MQ=255) tCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTa > 2:1007249/1‑72 (MQ=255) tCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTa < 1:1007249/72‑1 (MQ=255) tCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTg > 3:483476/1‑109 (MQ=255) tCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTg < 4:483476/109‑1 (MQ=255) tCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCAtt > 4:136274/1‑120 (MQ=255) tCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCAtt < 3:136274/120‑1 (MQ=255) c‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCAcc > 4:177667/1‑100 (MQ=255) c‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCAcc < 3:177667/100‑1 (MQ=255) c‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCAcc > 2:562074/1‑100 (MQ=255) c‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCAcc < 1:562074/100‑1 (MQ=255) aTCAGCCAGAGGCGATTCAGCGTCTCGAAGTGGCGCTAGAAGATGGACTGGGGCACGAGACGTTACTTGGCGTGACTGGCTCAGGGAGAACCTTCCCCACTGCCAATGTCATTGCTGACAGACCGCGCCCAACCATGGTACTTGCGcc < 4:330184/148‑1 (MQ=255) tCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGccc > 2:671919/1‑148 (MQ=255) aGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTc > 4:478960/1‑107 (MQ=255) aGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTc < 3:478960/107‑1 (MQ=255) | ATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGC‑GATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCC > NC_000913/813444‑813720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |