Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,609,561:1 +C 6.5% coding (1120/1452 nt) uxaB ← altronate oxidoreductase, NAD‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,609,5611.C 6.5% 549.9 / 31.6 124coding (1120/1452 nt)uxaBaltronate oxidoreductase, NAD‑dependent
Reads supporting (aligned to +/- strand):  ref base . (58/58);  new base C (5/3);  total (63/61)
Fisher's exact test for biased strand distribution p-value = 7.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

Only 100 of 133 total aligned reads displayed.

CTGATAACGTTCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGT  >  NC_000913/1609415‑1609697
                                                                                                                                                   |                                                                                                                                        
cTGATAACGTTCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg‑t                                                                                                                                         >  2:78818/1‑148 (MQ=255)
   aTAACGTTCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGc                                                                                                                                      >  2:705883/1‑148 (MQ=255)
   aTAACGTTCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGc                                                                                                                                      >  1:445078/1‑148 (MQ=255)
      aCGTTCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAgg                                                                                                                                   >  4:727212/1‑148 (MQ=255)
          tCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGc                                                                                                                               >  4:275235/1‑148 (MQ=255)
          tCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGc                                                                                                                               <  1:78818/148‑1 (MQ=255)
          tCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAg                                                                                                                                    <  3:598045/143‑1 (MQ=255)
            cagccagTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCgg                                                                                                                             <  2:546851/148‑1 (MQ=255)
              gccagTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGATGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg                                                                                                                                           <  2:420697/133‑1 (MQ=255)
              gccagTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg                                                                                                                                           <  4:16966/133‑1 (MQ=255)
               ccagTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTg                                                                                                                          >  4:35876/1‑148 (MQ=255)
                cagTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGc                                                                                                                         >  1:143858/1‑148 (MQ=255)
                   tgtgCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGc                                                                                                                                      <  1:298344/132‑1 (MQ=255)
                   tgtgCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGa                                                                                                                      >  2:377277/1‑148 (MQ=255)
                       cATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACtt                                                                                                                  <  3:275235/148‑1 (MQ=255)
                       cATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACtt                                                                                                                  <  1:377277/148‑1 (MQ=255)
                        aTCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTg                                                                                                                 >  4:1035901/1‑148 (MQ=255)
                             ccTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCAt                                                                                                            >  1:901233/1‑148 (MQ=255)
                                  aCCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACt                                                                                                                   >  4:55608/1‑136 (MQ=255)
                                  aCCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACt                                                                                                                   <  3:55608/136‑1 (MQ=255)
                                  aCCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGt                                                                                                       >  2:398433/1‑148 (MQ=255)
                                    cGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                                                                     <  3:948112/148‑1 (MQ=255)
                                    cGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                                                                     <  3:35876/148‑1 (MQ=255)
                                    cGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                                                                     <  2:445078/148‑1 (MQ=255)
                                       atatGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGtt                                                                                                      <  4:783341/144‑1 (MQ=255)
                                       atatGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGtt                                                                                                      >  3:783341/1‑144 (MQ=255)
                                       atatGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGt                                                                                                       <  1:733031/143‑1 (MQ=255)
                                       atatGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGt                                                                                                       >  2:733031/1‑143 (MQ=255)
                                        tatGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGt                                                                                                       >  2:197910/1‑142 (MQ=255)
                                        tatGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAgcg                                                                                                 <  1:539917/148‑1 (MQ=255)
                                          tGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                                                                     <  1:674979/142‑1 (MQ=255)
                                          tGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                                                                     <  1:231859/142‑1 (MQ=255)
                                          tGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                                                                     >  2:231859/1‑142 (MQ=255)
                                          tGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                                                               <  2:143858/148‑1 (MQ=255)
                                          tGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                                                               <  3:727212/148‑1 (MQ=255)
                                           gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGa                                                                                              <  1:398433/148‑1 (MQ=255)
                                            tttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                                                             <  2:901233/148‑1 (MQ=255)
                                             ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                                                               >  3:1145513/1‑145 (MQ=255)
                                             ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                                                               <  4:1145513/145‑1 (MQ=255)
                                             ttCGCCGCTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATa                                                                                                           >  2:664308/1‑133 (MQ=255)
                                             ttCGCCGCTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATa                                                                                                           <  1:664308/133‑1 (MQ=255)
                                               cGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                                                             <  2:924115/145‑1 (MQ=255)
                                                 ccGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTgg                                                                                                                >  4:909840/1‑124 (MQ=255)
                                                 ccGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAggg                                                                                                                                  <  3:1091617/106‑2 (MQ=255)
                                                 ccGTGACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTgg                                                                                                                <  3:909840/124‑1 (MQ=255)
                                                   gTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagc                                                                                      <  2:467113/148‑1 (MQ=255)
                                                    ttACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                                                               >  4:281889/1‑122 (MQ=255)
                                                    ttACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagca                                                                                     <  4:611215/148‑1 (MQ=255)
                                                           caccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATg                                                                              <  3:149645/148‑1 (MQ=255)
                                                               acGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCa                                                                                                                                     >  2:484867/1‑89 (MQ=255)
                                                               acGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCa                                                                                                                                     <  1:484867/89‑1 (MQ=255)
                                                               acGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTg                                                                                                                 >  1:392010/1‑109 (MQ=255)
                                                               acGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                                                               <  1:913832/111‑1 (MQ=255)
                                                                   tAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCAt                                                                                                            <  1:404949/110‑1 (MQ=255)
                                                                   tAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCAt                                                                                                            >  2:404949/1‑110 (MQ=255)
                                                                     gAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTg                                                                                                                 >  4:45476/1‑103 (MQ=255)
                                                                     gAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTg                                                                                                                 <  3:45476/103‑1 (MQ=255)
                                                                            atcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg                                                                                                                                           >  4:1124257/1‑71 (MQ=255)
                                                                            atcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGa                                                                                              <  3:1133323/115‑1 (MQ=255)
                                                                            atcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGa                                                                                              >  4:1133323/1‑115 (MQ=255)
                                                                             tcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACtt                                                                                                                  >  1:412323/1‑94 (MQ=255)
                                                                              caatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAg                                                                                                                                    >  3:379778/1‑75 (MQ=255)
                                                                                     gCTAATTCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                                                               >  2:608157/1‑89 (MQ=255)
                                                                                     gCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                                                               <  1:608157/89‑1 (MQ=255)
                                                                                       tAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc                                                    <  2:899124/146‑1 (MQ=255)
                                                                                       tAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc                                                    >  1:899124/1‑146 (MQ=255)
                                                                                       tAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc                                                    >  1:826470/1‑146 (MQ=255)
                                                                                        aaTGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATg                                                                              <  2:1116656/119‑1 (MQ=255)
                                                                                        aaTGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATg                                                                              >  1:1116656/1‑119 (MQ=255)
                                                                                            cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCt                                                                            >  4:473833/1‑117 (MQ=255)
                                                                                            cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCt                                                                            <  3:473833/117‑1 (MQ=255)
                                                                                              aaaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTa                                                                          >  1:285105/1‑117 (MQ=255)
                                                                                              aaaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTa                                                                          <  2:285105/117‑1 (MQ=255)
                                                                                               aaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTa                                                                     >  3:179076/1‑121 (MQ=255)
                                                                                               aaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTa                                                                     <  4:179076/121‑1 (MQ=255)
                                                                                                   aaGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCAc                                        >  4:909722/1‑146 (MQ=255)
                                                                                                    aGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTgg                                     <  1:456931/148‑1 (MQ=255)
                                                                                                           ccGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAc                                                                                         <  4:873607/89‑1 (MQ=255)
                                                                                                           ccGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAc                                                                                         >  3:873607/1‑89 (MQ=255)
                                                                                                           ccGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGa                              <  2:844658/148‑1 (MQ=255)
                                                                                                              gAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagcag                                                                                    >  3:280658/1‑91 (MQ=255)
                                                                                                                 gtgtGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAg                        <  3:1035901/148‑1 (MQ=255)
                                                                                                                       cGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGaa                                 <  3:347647/133‑1 (MQ=255)
                                                                                                                       cGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGaa                                 >  4:347647/1‑133 (MQ=255)
                                                                                                                          ttGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagc                                                                                      <  2:39238/77‑1 (MQ=255)
                                                                                                                          ttGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACg                                                                   >  2:436342/1‑96 (MQ=255)
                                                                                                                          ttGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACg                                                                   <  1:436342/96‑1 (MQ=255)
                                                                                                                          ttGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg                                                 >  4:572019/1‑114 (MQ=255)
                                                                                                                          ttGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg                                                 <  3:572019/114‑1 (MQ=255)
                                                                                                                                tCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACg               <  2:1062048/142‑1 (MQ=255)
                                                                                                                                tCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACg               >  1:1062048/1‑142 (MQ=255)
                                                                                                                                     cctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTcc                          <  4:534613/126‑1 (MQ=255)
                                                                                                                                     cctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGaa                                 >  4:504748/1‑119 (MQ=255)
                                                                                                                                     cctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGaa                                 <  3:504748/119‑1 (MQ=255)
                                                                                                                                       tgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAt       <  1:501377/143‑1 (MQ=255)
                                                                                                                                       tgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAt       >  2:501377/1‑143 (MQ=255)
                                                                                                                                        gccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCt                                                                            <  1:147561/73‑1 (MQ=255)
                                                                                                                                        gccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGt                       >  1:313511/1‑126 (MQ=255)
                                                                                                                                        gccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGt                       <  2:313511/126‑1 (MQ=255)
                                                                                                                                                 tg‑tgGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg                                                 <  2:298423/91‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                        
CTGATAACGTTCCAGCCAGTGTGCATCGTCCTGTACCGGATATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGT  >  NC_000913/1609415‑1609697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑