New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2505958	72 (0.770)	6 (0.070)	3/186	NT	8.3%	coding (675/1086 nt)	ypdF	Xaa‑Pro aminopeptidase
	?	NC_000913	= 2505986	66 (0.760)					coding (647/1086 nt)	ypdF	Xaa‑Pro aminopeptidase

CGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCTTTTTCTGCGCCC  >  NC_000913/2505843‑2506111                                                                                                                                                 |                                                                                                                              cGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑Agcgc                                                                                                                           <  2:492524‑M2/148‑5 (MQ=255) cGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑Agcgc                                                                                                                           >  1:492524‑M2/1‑144 (MQ=255)           aaTCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTTGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCg                                                                                                                 <  4:679242/148‑1 (MQ=255)                cgGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑a                                                                                                                               >  4:523707/1‑129 (MQ=255)                cgGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑a                                                                                                                               <  3:523707/129‑1 (MQ=255)                       tgctgcGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCg                                                                                                                 >  2:440031/1‑136 (MQ=255)                       tgctgcGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCg                                                                                                                 <  1:440031/136‑1 (MQ=255)                                           ggACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCg                                                                                                                 <  3:448661/116‑1 (MQ=255)                                           ggACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCg                                                                                                                 >  4:448661/1‑116 (MQ=255)                                                  ttGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCgag                                                                                                               <  4:507547/111‑1 (MQ=255)                                                  ttGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCgag                                                                                                               >  3:507547/1‑111 (MQ=255)                                                  ttGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCt                                                                                  <  3:280642/140‑1 (MQ=255)                                                  ttGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCt                                                                                  >  4:280642/1‑140 (MQ=255)                                                            ttAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGt                                                                >  4:303435/1‑148 (MQ=255)                                                             tAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTg                                                               >  4:712886/1‑148 (MQ=255)                                                             tAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTg                                                               >  2:531392/1‑148 (MQ=255)                                                               aaCAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCg                                                             >  4:100093/1‑148 (MQ=255)                                                                 cagcagGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGt                                                                               <  3:962484/128‑1 (MQ=255)                                                                 cagcagGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGt                                                                               >  4:962484/1‑128 (MQ=255)                                                                 cagcagGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCttt                                                                     >  2:287815/1‑138 (MQ=255)                                                                 cagcagGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCttt                                                                     <  1:287815/138‑1 (MQ=255)                                                                       gTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGcc                                                     <  3:303435/148‑1 (MQ=255)                                                                        tGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACt                                                                                                    <  3:988244/100‑1 (MQ=255)                                                                        tGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACt                                                                                                    >  4:988244/1‑100 (MQ=255)                                                                         gagaTTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAAt                                                                                    <  4:351354/115‑1 (MQ=255)                                                                         gagaTTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAAt                                                                                    >  3:351354/1‑115 (MQ=255)                                                                             ttCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCt                                                                                  >  2:591522/1‑113 (MQ=255)                                                                             ttCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCt                                                                                  <  1:591522/113‑1 (MQ=255)                                                                             ttCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACgc                                               <  3:440397/148‑1 (MQ=255)                                                                                      cACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTg                                      <  3:712886/148‑1 (MQ=255)                                                                                      cACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTg                                      <  1:531392/148‑1 (MQ=255)                                                                                       aCCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCg                                                                                                  <  4:216378/87‑1 (MQ=255)                                                                                       aCCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCg                                                                                                  >  3:216378/1‑87 (MQ=255)                                                                                        ccccTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCt                                                                       <  2:831443/113‑1 (MQ=255)                                                                                        ccccTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCt                                                                       >  1:831443/1‑113 (MQ=255)                                                                                           cTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGcccc                                                   >  2:881886/1‑130 (MQ=255)                                                                                           cTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGcccc                                                   <  1:881886/130‑1 (MQ=255)                                                                                             tCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGt                                                                >  4:348945/1‑115 (MQ=255)                                                                                             tCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGt                                                                <  3:348945/115‑1 (MQ=255)                                                                                                 cATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATgg                            >  4:524462/1‑147 (MQ=255)                                                                                                 cATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATgg                            <  3:524462/147‑1 (MQ=255)                                                                                                   ttCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTg                                                               >  4:543015/1‑110 (MQ=255)                                                                                                   ttCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTg                                                               <  3:543015/110‑1 (MQ=255)                                                                                                      aCCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCt                                                                                  >  2:89451/1‑88 (MQ=255)                                                                                                      aCCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAAGCt                                                                                  <  1:89451/88‑1 (MQ=255)                                                                                                          gCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGc                                                                   >  2:805187/1‑99 (MQ=255)                                                                                                          gCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGc                                                                   <  1:805187/99‑1 (MQ=255)                                                                                                            aaGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAgg                <  3:100093/148‑1 (MQ=255)                                                                                                              ggTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACt                                                                                                    >  4:801440/1‑62 (MQ=255)                                                                                                              ggTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACt                                                                                                    <  3:801440/62‑1 (MQ=255)                                                                                                               gTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑Agcgcaccttgctggtgaatggcgaaggggtgagcgccgaatctcacctgctgtttaacgtctatcaaattgtcctgcaggcacagctcgcagcaatctccgcgatt                     >  1:358114‑M2/1‑34 (MQ=255)                                                                                                               gTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑Agcgcaccttgctggtgaatggcgaaggggtgagcgccgaatctcacctgctgtttaacgtctatcaaattgtcctgcaggcacagctcgcagcaatctccgcgatt                     <  2:358114‑M2/140‑107 (MQ=255)                                                                                                               gTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑Agcgcaccttgctggtgaatggcgaaggggtgagcgccgaatctcacctgctgtttaacgtctatcaa                                                            >  3:54278‑M2/1‑34 (MQ=255)                                                                                                               gTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑Agcgcaccttgctggtgaatggcgaaggggtgagcgccgaatctcacctgctgtttaacgtctatcaa                                                            <  4:54278‑M2/101‑68 (MQ=255)                                                                                                                  cgcgTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCtt                                                                      <  3:1083445/88‑1 (MQ=255)                                                                                                                  cgcgTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCtt                                                                      >  4:1083445/1‑88 (MQ=255)                                                                                                                       cATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGgt                           <  1:172591/126‑1 (MQ=255)                                                                                                                       cATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGgt                           >  2:172591/1‑126 (MQ=255)                                                                                                                         tatCAGAGCAGTAGCCCTGATATGAcgcgcaccttgctggtgaatggcgaaggggtgagcgccgaatctcacctgctgtttaacgtctatcaa                                                           <  1:678395‑M2/93‑69 (MQ=255)                                                                                                                         tatCAGAGCAGTAGCCCTGATATGAcgcgcaccttgctggtgaatggcgaaggggtgagcgccgaatctcacctgctgtttaacgtctatcaa                                                           >  2:678395‑M2/1‑25 (MQ=255)                                                                                                                           tCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCa                                                  <  2:219585/99‑1 (MQ=255)                                                                                                                           tCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCa                                                  >  1:219585/1‑99 (MQ=255)                                                                                                                              gagCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCa                                                          >  4:1131103/1‑88 (MQ=255)                                                                                                                              gagCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCa                                                          <  3:1131103/88‑1 (MQ=255)                                                                                                                               agCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACaa                               <  1:743657/114‑1 (MQ=255)                                                                                                                               agCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACaa                               >  2:743657/1‑114 (MQ=255)                                                                                                                               agCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATgg                            <  3:434400/117‑1 (MQ=255)                                                                                                                               agCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATgg                            >  4:434400/1‑117 (MQ=255)                                                                                                                                 cAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCtt             >  1:864404/1‑130 (MQ=255)                                                                                                                                 cAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCtt             <  2:864404/130‑1 (MQ=255)                                                                                                                                     aGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGt                                                                               >  4:520984/1‑60 (MQ=255)                                                                                                                                     aGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGt                                                                               <  3:520984/60‑1 (MQ=255)                                                                                                                                       cccTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCTTTTTCTgcg     >  2:656475/1‑132 (MQ=255)                                                                                                                                       cccTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCTTTTTCTgcg     <  1:656475/132‑1 (MQ=255)                                                                                                                                       cccTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCTTTTTCTGCGccc  >  4:528516/1‑135 (MQ=255)                                                                                                                                       cccTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCTTTTTCTGCGccc  <  3:528516/135‑1 (MQ=255)                                                                                                                                                 |                                                                                                                              CGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGAGCAGTAGCCCTGATAC‑AGCGCACCGAAATCGAGAGTGACAAACTCGCCCGCTGCAACAATCTTGTCGCTGGCTTTGCCGTGCGGCAGCGCCCCACGCCAGCCACTGGCGACAATGGTGTCAAAAGAGGCTTTTTCTGCGCCC  >  NC_000913/2505843‑2506111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.