| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,776,127 | A→G | 7.5% | K186E (AAA→GAA) | mtlR → | mannitol operon repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,776,127 | 0 | A | G | 7.5% | 846.3 / 38.4 | 253 | K186E (AAA→GAA) | mtlR | mannitol operon repressor |
| Reads supporting (aligned to +/- strand): ref base A (118/115); new base G (9/10); total (127/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 263 total aligned reads displayed.
CCACCGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCCGGACGGAATCGCG > NC_000913/3776013‑3776273 | ccaccGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCaa > 1:612449/1‑116 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAg > 4:817518/1‑120 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCtc > 2:475639/1‑122 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCa < 1:604712/119‑1 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAg > 3:263640/1‑120 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAg < 4:263640/120‑1 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaa > 3:671067/1‑126 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaa < 4:671067/126‑1 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTAAGCTGATTTTGGAAATCAg > 4:906732/1‑120 (MQ=255) gccgccACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACg < 3:570984/148‑1 (MQ=255) ccgccACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGt > 4:545786/1‑148 (MQ=255) gccACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCttt < 2:609025/130‑1 (MQ=255) cacaGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa > 1:804717/1‑132 (MQ=255) caGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATc > 4:1136096/1‑108 (MQ=255) caGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATc < 3:1136096/108‑1 (MQ=255) caGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa > 3:44983/1‑130 (MQ=255) caGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTa < 2:496316/134‑1 (MQ=255) gAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGcc < 3:184110/148‑1 (MQ=255) aaCCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAATTCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg < 1:68175/138‑1 (MQ=255) aCCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa < 3:346347/111‑1 (MQ=255) agcagACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCtt > 2:207897/1‑114 (MQ=255) aCTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTg < 1:245269/148‑1 (MQ=255) ccAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa < 1:494279/100‑1 (MQ=255) ccAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCtt < 3:486465/106‑1 (MQ=255) aGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAg < 3:919623/89‑1 (MQ=255) gTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAg < 2:671117/88‑1 (MQ=255) gTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCgg > 2:984518/1‑148 (MQ=255) tttGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTa > 2:130841/1‑111 (MQ=255) ttGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGcc < 1:153139/130‑1 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGATCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa < 2:283351/102‑1 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCt < 4:329849/84‑1 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCt > 3:329849/1‑84 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa > 1:655646/1‑102 (MQ=255) gcaatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATaaa > 3:818729/1‑148 (MQ=255) gcaatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATaaa > 1:846750/1‑148 (MQ=255) caatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa < 1:120589/99‑1 (MQ=255) aatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCa < 4:190606/71‑1 (MQ=255) aatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCg > 2:648875/1‑141 (MQ=255) atgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCtt > 3:847978/1‑92 (MQ=255) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCtc < 3:1027037/79‑2 (MQ=38) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa > 1:1026399/1‑85 (MQ=255) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGccc < 4:401361/121‑1 (MQ=255) gcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTg > 1:516086/1‑117 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCAGACGT‑TGCTTAc > 2:697638/1‑114 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTc > 2:856436/1‑107 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCt < 4:1077564/130‑1 (MQ=255) aaaTTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcgacg < 4:830063/148‑1 (MQ=255) aaTTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCct > 4:1045550/1‑119 (MQ=255) ttCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTACACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCgg > 4:955608/1‑130 (MQ=255) cAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGataat < 1:1093902/148‑1 (MQ=255) tATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCa < 1:984518/148‑1 (MQ=255) aTCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCtt < 4:1025919/76‑1 (MQ=255) aTCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa < 3:1114835/81‑1 (MQ=255) aTCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAg < 2:846750/148‑1 (MQ=255) tCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTg < 2:322298/114‑1 (MQ=255) tCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTc < 1:1017075/144‑1 (MQ=255) tCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGa < 3:1053966/148‑1 (MQ=255) cAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGc < 2:37101/114‑1 (MQ=255) aCAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCg > 1:739900/1‑120 (MQ=255) aCAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGt > 2:9176/1‑148 (MQ=255) cAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCttt > 2:794604/1‑72 (MQ=255) cAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCctc < 4:142489/104‑1 (MQ=255) cAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCctc > 3:142489/1‑104 (MQ=255) aGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGa > 2:1078478/1‑119 (MQ=255) cTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGc < 1:433303/79‑1 (MQ=255) tgtgCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAg < 2:1087967/77‑1 (MQ=255) cGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTAc > 1:314065/1‑98 (MQ=255) gATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGc < 3:969791/107‑1 (MQ=255) tCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACg > 3:732284/1‑148 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCt > 4:896812/1‑55 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCt < 3:896812/55‑1 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTg < 1:338339/95‑1 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCtt < 1:567617/98‑1 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCCTAAAAAAAGCCttt > 2:119920/1‑57 (MQ=255) caaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg < 3:799518/75‑1 (MQ=255) caaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 4:799518/1‑75 (MQ=255) caaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGt < 1:881299/134‑1 (MQ=255) caaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGt > 4:337635/1‑134 (MQ=255) aaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACg < 1:9176/148‑1 (MQ=255) tGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTAc < 2:587481/77‑1 (MQ=255) tCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 2:558896/1‑69 (MQ=255) tCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGc > 4:501866/1‑89 (MQ=255) tCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGc < 3:501866/89‑1 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAg > 4:485060/1‑56 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcg < 3:667032/102‑1 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCg < 1:264295/148‑1 (MQ=255) tCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcg > 2:510756/1‑101 (MQ=255) ctgactgaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATc > 4:203779/1‑143 (MQ=255) ctgactgaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATc < 3:203779/143‑1 (MQ=255) gactgaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCgg > 2:432286/1‑84 (MQ=255) cTGATTTTGGAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATaa < 4:225119/119‑1 (MQ=255) cTGATTTTGGAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATaa > 3:225119/1‑119 (MQ=255) tGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCtt < 2:769134/73‑1 (MQ=255) ttCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGAtata > 1:507155/1‑113 (MQ=255) tCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCCGGACGGAATcg < 4:732284/148‑1 (MQ=255) ccAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAg > 1:777539/1‑97 (MQ=255) cAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACt < 4:656919/92‑1 (MQ=255) cAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCg < 1:108554/127‑1 (MQ=255) cAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCCGGACGGAATcgcg < 1:404028/148‑1 (MQ=255) aaaaTCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGa < 2:262826/105‑1 (MQ=255) | CCACCGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCCGGACGGAATCGCG > NC_000913/3776013‑3776273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |