| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,092,779 | Δ1 bp | 6.4% | coding (902/951 nt) | gshB → | glutathione synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,092,779 | 0 | T | . | 6.4% | 644.8 / 35.0 | 187 | coding (902/951 nt) | gshB | glutathione synthetase |
| Reads supporting (aligned to +/- strand): ref base T (92/82); new base . (8/4); total (101/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.94e-01 | |||||||||||
Only 100 of 189 total aligned reads displayed.
TGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGAACATAATACCAATGGTGCAATGGGGATCATCGT > NC_000913/3092509‑3093052 | tGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCACGGCAGATCGGTCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTTGTCTGGATCTCATTGGCGACAGTATGACTGCAATTAACGTCACTAGCACAACCTGTAGTCGGGAGATTGAGTACAAGTCTCCGTTG‑TCCATCACCGGCATTTTCAtt > 4:508937/1‑273 (MQ=255) gggcgggagcgTATTCCGCAAGGGGGCGAAGCCCTGGGCAATATGGAGGACGGTGGTCGCGGTGAACCTCGGCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGACGACGCTGAAAGAAAAAGGGCTGAGTTTTGTGGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGGCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGtt < 1:92335/266‑1 (MQ=255) gcggggtggccGCGGGGGGGCGGAACCCGTGGACAGAGGGCGGCGGGTGGCGGCGGGGAACCTAGTCCGATGACGGAAAGGGACGGGAAAATCTCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAGTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGGGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTAcagc < 4:27620/265‑1 (MQ=255) cgcgTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAACGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGCTATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACATGTATTCGTGAGATTGAAGCAGAGTTTCCGTTG‑TCGATCACCGGAATGTTCATGGATGCCATCGAAGCACGTTTAcaccag > 2:208045/1‑275 (MQ=255) cgcgTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGCCCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGCGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGAAATGTTAATGGATGCCATCGAACCCCGTTTCcagca > 4:335908/1‑274 (MQ=255) aTTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATAGCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGTATGCAATCGCAGCACGTTTACAGCAGCAGTa > 4:642665/1‑275 (MQ=255) tGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTgaga < 2:642667/275‑1 (MQ=255) acgGTGAACCTCGTCCGCTGGAGGGAGGCGCAGGGCAAATCGCCCGTCAGATCGGGCCGACGCGGAAAGAAAAAGGGCTGATGTTTGTTGGGCTGGATATCATCGGCGACCGTCGGACTGAAATTAACGTCACCAGACCAACCGGTATTCGTGGGATTGAAGCAGAGTTTCCGGTG‑TCGTTCACCGGAATGTTAATGGATGCTATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAgc < 4:208044/273‑1 (MQ=255) gTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAACGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCTAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGCCTCTGAGTGACAGCGCCCTTCTTTc > 2:607449/1‑273 (MQ=255) aCTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGTTGCCa > 4:478057/1‑174 (MQ=255) aCTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCAAGAAGGATCTCGTTTGGACCCTTAGTGACACCGCCCTTCTTTCCACAC‑ATCCCGGgctttcct > 4:156988/1‑269 (MQ=255) tGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCGTCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGc > 2:141275/1‑275 (MQ=255) gggAAAACCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGAt < 8:484504/148‑1 (MQ=255) gAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGa < 2:478059/174‑1 (MQ=255) cGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTGCAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGa > 2:345638/1‑275 (MQ=255) gCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCCCCAGCCCAAACTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTGATCGA‑CACCGGaa < 5:204952/148‑1 (MQ=255) gTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGGGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTGCAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCa < 4:345636/274‑1 (MQ=255) gATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATgg > 7:281053/1‑149 (MQ=255) tCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGaa < 7:480263/138‑1 (MQ=255) cGGGCAGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGAATGAAATTAACGTCACCAGCCCAACCTGTAGTCGTGAGATTGAAGCAGAGTGTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGAACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCGTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAg < 1:108627/275‑1 (MQ=255) ggCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGc < 5:113990/148‑1 (MQ=255) gCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTNATGGATGCCATCGACGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTGGTTGAGCATCTGATGGCCACCNTTCTTCTTTCCCAGCAATACGGGGTNGT‑TTGCTTTTTTTAAACAGGAAACAGaaa > 3:145828/1‑274 (MQ=255) ccGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCa < 5:433456/148‑1 (MQ=255) gCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGaa < 5:738516/148‑1 (MQ=255) agaaaAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGACGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGt < 6:384255/148‑1 (MQ=255) aaaaaGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTa < 7:182284/149‑1 (MQ=255) aaaGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAAtt < 2:320470/274‑1 (MQ=255) ggCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTAcagcag > 8:581623/1‑149 (MQ=255) cggATTTTTGTTTGTCTGGATATCATCGGCGACCGGCTGACTGAAATTAACGTCACCAGCCCAACCTGGAGTCGTGGGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCa < 4:662187/273‑1 (MQ=255) cTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTAcagcagc < 5:753683/148‑1 (MQ=255) tGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCa < 4:135003/274‑1 (MQ=255) tttttGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTaa > 7:455450/1‑149 (MQ=255) ttttGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTaa > 6:750175/1‑148 (MQ=255) gTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAg > 2:749100/1‑150 (MQ=255) gTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTAt > 2:383747/1‑274 (MQ=255) tCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAg > 7:784137/1‑149 (MQ=255) cTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGa > 2:397181/1‑244 (MQ=255) tGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCg > 8:257623/1‑149 (MQ=255) gATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCgag > 8:882249/1‑149 (MQ=255) gATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCAt > 2:342755/1‑275 (MQ=255) gATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCAt > 2:566503/1‑275 (MQ=255) catcGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGa > 7:35378/1‑149 (MQ=255) atcGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGc > 1:110089/1‑275 (MQ=255) cGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCg < 5:249661/148‑1 (MQ=255) ccGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCtttt < 4:770987/202‑1 (MQ=255) gTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTgaga < 8:155256/149‑1 (MQ=255) ctgaAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAg > 5:783574/1‑130 (MQ=255) ctgaAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAg < 6:783574/130‑1 (MQ=255) gaAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGActc < 6:420898/144‑1 (MQ=255) gaAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAg > 5:175550/1‑148 (MQ=255) aTTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGa < 6:23846/66‑1 (MQ=255) ttAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACa > 8:801000/1‑149 (MQ=255) ttAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACa < 7:801000/149‑1 (MQ=255) ttAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACa < 7:890580/149‑1 (MQ=255) cGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAgcgc < 8:335968/149‑1 (MQ=255) aCCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATTCCTGCTCTCCAGGATCCGTTTTTACGTCGTTcctt > 4:109719/1‑273 (MQ=255) aCCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCg < 2:517386/274‑1 (MQ=255) ccAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGa < 7:700050/117‑1 (MQ=255) cccAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCttt < 6:824614/148‑1 (MQ=255) aaCCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCa > 6:536469/1‑148 (MQ=255) aaCCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCAc < 7:680747/149‑1 (MQ=255) aCCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTg > 2:40800/1‑163 (MQ=255) ccTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGtt > 8:690031/1‑115 (MQ=255) gTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑At > 5:709934/1‑148 (MQ=255) aTTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGa > 2:118677/1‑275 (MQ=255) aTTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGa > 2:99205/1‑275 (MQ=255) tCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTgg < 7:257623/149‑1 (MQ=255) tCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTg < 5:299782/148‑1 (MQ=255) tGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGGTCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGgc > 6:666479/1‑148 (MQ=255) tGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCGGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGAACat < 2:508939/274‑1 (MQ=255) ggggaTTGAAGCAGGTTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑GTACTGGGCGCTATTGCTTTTTTGAGCCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCACCAGGATCCGATTTTCCGTCGTGCCGTGGTCTACATTTGCGAACat < 4:390179/271‑1 (MQ=255) gaTTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCa < 3:66534/165‑1 (MQ=255) aTTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGaa > 1:36797/1‑54 (MQ=255) aTTGAAGCAGAGTTTCCGGTA‑TCGACCACCGGAATGTTAATGGATGCCATCGAATCACGTTTACAGCAGCAGTAACACACCTTAGCGAGAAGGATCACGTTGAGACTCTGAATGACAGCGCCCGTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTGGAACCAGGAAACAGAACCTATGACAATGAATTTACAGCATCACTCTCTTATTCCCATGCCTGCTCCCCAGGATCCGATTTTCGGGCGTTCCGTGGTCTACATTTGCGAACaaaatag > 4:361833/1‑274 (MQ=255) ttGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGtt > 8:356177/1‑149 (MQ=255) ttGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGt > 5:388192/1‑148 (MQ=255) ttGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGt > 5:340317/1‑148 (MQ=255) ttGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGt > 6:92107/1‑148 (MQ=255) ttGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGAACataa < 2:684649/271‑1 (MQ=255) aaGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCAc < 3:36796/54‑1 (MQ=255) aaGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCt > 7:132279/1‑149 (MQ=255) aGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGa < 7:843195/106‑1 (MQ=255) ttaacattCCGGTGATCGA‑CACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGtt < 7:787823/137‑1 (MQ=255) ttaacattCCGGTGATCGA‑CACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGtt > 8:787823/7‑143 (MQ=255) gagTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCtttttt < 7:414766/149‑1 (MQ=255) gagTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCAGTTGCtttttt < 7:530032/149‑1 (MQ=255) agTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTga > 2:276265/1‑93 (MQ=255) agTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTg > 2:447768/1‑170 (MQ=255) tttCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGa < 6:388192/148‑1 (MQ=255) tCCGGTGATCGA‑CACCGGAATGTTAATGGATGCCATCGAAGCACGTTTAcagcagca > 8:286940/1‑57 (MQ=37) tCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGtt < 4:446829/87‑1 (MQ=255) cGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCa < 6:196116/148‑1 (MQ=255) tg‑tCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGT‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGaa > 8:596929/1‑149 (MQ=255) tg‑tCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAAc < 2:658462/156‑1 (MQ=255) g‑tCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTCAGCGAGAAGGAACTCGTTGAGACCCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTATGACATTGAATTTACAGCATCACTTTCTTGTTACCAGCCCGGCTCTCCAGGATCCGATCTTACGTCGTTACGTGGTTCACATTTTCGACACTAATACCAATGGTGCTATGGGGact > 4:686289/1‑272 (MQ=255) gATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAg < 8:125754/149‑1 (MQ=255) gATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAg > 8:493937/1‑149 (MQ=255) aTCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAg > 5:5703/1‑148 (MQ=255) aTCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAg > 5:706034/1‑148 (MQ=255) aTCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCAt < 2:547994/191‑1 (MQ=255) | TGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTG‑TCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAACCCACCTTAGCGAGAAGGATCTCGTTGAGACTCTGAGTGACAGCGCCCTTCTTTCCACGC‑ATACTGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGAACATAATACCAATGGTGCAATGGGGATCATCGT > NC_000913/3092509‑3093052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |