| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,512,350:1 | +G | 5.8% | coding (65/957 nt) | fecD ← | ferric citrate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,512,350 | 1 | . | G | 5.8% | 584.5 / 32.1 | 138 | coding (65/957 nt) | fecD | ferric citrate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base . (67/63); new base G (6/2); total (73/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.85e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
CAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGCCCCCACAGAGGCCAGGCTGGCGGCATGGTTAACACCGAGAATATCCGGTGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTGCGCTGATCGAAGCCTGCCCAGAAGCGCGCCAGATGTGGCACCAGCAGAC > NC_000913/4512076‑4512619 | cggcggcgGAACAATCCCGGGCAGCGCAGGCAAAAGAAGTGGAGCCCCCGCAGAGGCCAGGCTGGCGGCATGGTTAACACCGGGAATAGCCGGTGATGCCAGAGGGTTGCGCACAATCCCCGGTATCAGCACGCCGGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCatat < 4:479920/273‑1 (MQ=255) gggccagccACAGAGGCCAGGCTGGCGGCATGGTTAACACCGAGAATATCCGGTGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGtga < 2:606562/267‑1 (MQ=255) agGCCAGGCTGGCGGCATGGTTAACACCGAGAATATCCGGTGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAg > 2:376764/1‑274 (MQ=255) aGGCTGGCGGCATGGTTAACACCGAGAATATCCGGTGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCCGCACCGACAAACAATGCCAGCAGCAAGCCCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCATTCGGTCAGCAGCGCGCGCCACGGCGCTGGGATCCCGCCCATAA‑GGGGTGATAACCGCGCACAGCCCGCCAGGCCAAGGGTGATGaaaagacacctgtccc > 4:606560/1‑262 (MQ=255) agaATATCCGGTGATGCCAGAGGGTTCCGGCCAATCCCCTGTATCCGCTCTCCCGCGACTGCCAGGTCTTCCCCGTCTAACAGTTCCAGCATCACGCGCTGCAGACGGTACTCCATCAATGTATTATAGCGCTCGCGTTCGTCCTCCTCTTCCGCTAGCAGCGCGTGCAACGGCACAGGGCTCACTCCCATAT‑GGAATGTTACCAGCTCAACACCCGCCAGGGCCAGGGTGATGAAAATCACCAGCGCCATTTTCATCACCCACTCCTCACaaac > 4:664084/1‑273 (MQ=255) tatCCGGTGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCatat < 4:646640/189‑1 (MQ=255) atCCGGCGTGGCCAGAGGGTTGCGCACAACCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGa < 2:80442/274‑1 (MQ=255) tGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCCCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATCT‑GGAGGGATAACAGCGCACAACCCGCCAGGGCAAGGGTGCTGAAAATACCCAGCGCAAGTTTCCACCTCGCCCACTCACAAGccccacacacc > 4:477939/1‑265 (MQ=255) agattcgacggggTGGCGCCAAACCCCCGGTATGAGCCGGCCCTCCACCGCGAGGGCCGAACCGACAAAATGTGCCAGGAGGAAGCGTGGCAGTGGCTACTCCAACAAAACATAATAATGCTCGGGTCCGGCCTGCAAGTGAGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCCGCGCAATTTTCATCCTCGCCTTCTCACAAGCCAGACAAAGCa < 4:376762/265‑1 (MQ=255) gCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑g > 6:637730/1‑148 (MQ=255) gCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGc > 2:188702/1‑229 (MQ=255) cgcccgccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACT‑CCATAT‑gggagt < 7:328182/149‑5 (MQ=255) gcccgccACGGCGGGGGATGCACCGACAAACAGTGCCAGCAGAAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGGCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCatat < 4:785646/143‑1 (MQ=255) gcccgccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGTCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGt < 5:665339/148‑1 (MQ=255) gcccgccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGa < 4:188701/229‑1 (MQ=255) gccACGGCGAGGGCTGCACCGACAAACAGTGCCAGTAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTGAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATaa < 7:616942/149‑1 (MQ=255) ccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAAc < 7:160871/149‑1 (MQ=255) cACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACa < 8:864290/149‑1 (MQ=255) cGAGGGCTGCACCGACAAACAGTGCAAGCAGAAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCAGAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGa < 2:532341/275‑1 (MQ=255) aGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGcaca > 8:804840/1‑149 (MQ=255) aCCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGcc < 5:152024/148‑1 (MQ=255) ccGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGccc > 8:103540/1‑144 (MQ=255) cGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAgg < 8:528398/149‑1 (MQ=255) aCAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGc > 7:841883/1‑149 (MQ=255) aaaCAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCaa > 8:44086/1‑149 (MQ=255) aGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAggg < 5:669527/148‑1 (MQ=255) gTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGACCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAgg > 7:24703/1‑146 (MQ=255) gTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGACCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAgg < 8:24703/146‑1 (MQ=255) tGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGtg < 5:112333/148‑1 (MQ=255) tGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGtg > 6:395962/1‑148 (MQ=255) ccAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTTCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGcc > 3:27732/1‑134 (MQ=255) ccAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGaaaa > 1:206471/1‑153 (MQ=255) agcaAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAGCAGCGCACAGccc > 8:482867/1‑126 (MQ=255) agcaAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAGCAGCGCACAGccc < 7:482867/126‑1 (MQ=255) aaGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAGAATAAc < 8:737472/149‑1 (MQ=255) aaGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATaa > 6:310908/1‑148 (MQ=255) gcgcGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAAcc > 6:885925/1‑148 (MQ=255) cgGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATc < 2:29751/201‑1 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTc < 7:429402/141‑1 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTc > 8:429402/1‑141 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCg > 6:1432/1‑148 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGc < 7:152741/149‑1 (MQ=255) tCAAGACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGCTGAAAATAACCAGCGCAATTTTCATCCTCGc > 5:259423/1‑148 (MQ=255) cAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCg > 2:333111/1‑204 (MQ=255) aaTACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctc < 7:188824/149‑1 (MQ=255) aaTACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcct < 6:901706/148‑1 (MQ=255) tACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctcc > 5:353266/1‑148 (MQ=255) aCATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctcct < 6:477845/148‑1 (MQ=255) aCATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCa < 4:333109/204‑1 (MQ=255) taataaTGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTcaca > 7:767547/1‑149 (MQ=255) ataatGCTCGTGGCAGGCGTGCCCGTCGGTCAGAAGCGCGCGCCACGGCACGTGGGTCACTCCCGTAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGAGATGAAAATAACCAGCGCAATTTTCATCCTAGCCTCCTCACAAGCCAGAAAAAGCAAGGGCTGCCAAGCAGCGCCAGCACTGCGCATGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCa < 4:146692/274‑1 (MQ=255) aatGCTCGTGTCAGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGcc < 1:153410/238‑1 (MQ=255) tGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAAcc > 4:804853/1‑114 (MQ=255) cTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGa < 6:353266/148‑1 (MQ=255) cTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGAGATCACTCCCAGAT‑GGAGTGATAACAGCGCACAGCCCGCCCAGGCAAGGCTGATGAACATAACCAGCGCAATTTTCATccgc > 4:507856/1‑128 (MQ=255) tCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACa > 8:578091/1‑149 (MQ=255) cGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAgcg < 2:804855/114‑1 (MQ=255) cGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACa > 5:606925/1‑148 (MQ=255) gtgtCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAgg > 1:48110/1‑88 (MQ=255) gtgtCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACaa < 5:310908/148‑1 (MQ=255) gtgtCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATg > 2:146693/1‑261 (MQ=255) gtgtCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACAGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGCAGGCCAGCTCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCCGCAGCATGATCACTGGCAGTAc > 1:173964/1‑275 (MQ=255) gtCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGAATGGACCCGAGAAGCAGGCTACCTGGCAGTACg > 2:399796/1‑274 (MQ=255) ccGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCaa < 3:48109/88‑1 (MQ=255) gCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCACTCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTgcg > 2:456879/1‑274 (MQ=255) cTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGc < 5:807803/148‑1 (MQ=255) ccAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGcc > 8:88634/1‑149 (MQ=255) cGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCa < 7:699604/149‑1 (MQ=255) tCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATa < 5:685015/48‑1 (MQ=255) tCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATa > 6:685015/1‑48 (MQ=255) cgcgcgcCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAg > 1:140402/1‑140 (MQ=255) gcgcgcCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACt > 8:580748/1‑149 (MQ=255) cccgcCACGGCACGGGGATCACTCCCGTAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAg > 2:713303/3‑213 (MQ=255) gcacggGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCg < 6:606925/148‑1 (MQ=255) ggggATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTGCGCTGATCGAAGCCTGCCCAGAAGCGCGCCAGaagct > 2:481455/1‑270 (MQ=255) ttaTCACT‑CCATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAt > 7:719605/3‑149 (MQ=255) ggATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATc > 2:389611/1‑196 (MQ=255) ggATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTGCGCTGATCGAAGCCTGCCCAGAAGCGCGCCAGATGTGGc < 2:664086/274‑1 (MQ=255) gagcACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCAAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTg > 5:219903/4‑139 (MQ=255) gATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTg < 6:219903/139‑1 (MQ=255) tCACT‑CCATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAtctc > 7:607796/1‑149 (MQ=255) cactccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAtctc > 5:312800/5‑148 (MQ=255) aCTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGTTGAAAATAACCATCGCAATTTTCATCCTCGCCTCCTCACAAGCCATACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 8:664485/1‑149 (MQ=255) aCTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGtt > 2:139346/1‑229 (MQ=255) cTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCGTCCTCGCCTCCTCACAAGCCAGACAAAGCAAg > 6:570133/1‑104 (MQ=255) actccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTACCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 8:363618/4‑149 (MQ=255) tCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCggg > 7:292678/1‑149 (MQ=255) tCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCggg > 7:91580/1‑149 (MQ=255) ctccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 6:790275/3‑148 (MQ=255) ctccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg < 5:790275/146‑1 (MQ=255) ccATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTgcgc < 4:139345/229‑1 (MQ=255) ccATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTGCGCTGATCGAAGCCTGCCCAGAAGCGCGCCAGATGTGGCACCAGCAGa < 2:477941/274‑1 (MQ=255) ccATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCGCACTGGCAGTACGTTGCCCTGACCGAAGCCTGCCCAGAAGCCAGCCCGATGTGACACccgccacc > 4:276338/1‑271 (MQ=255) cATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGaa < 8:767547/149‑1 (MQ=255) atat‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGaa < 5:1432/148‑1 (MQ=255) atat‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGaa < 5:395962/148‑1 (MQ=255) tat‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGc > 1:46534/1‑133 (MQ=255) tat‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTGCGCTGATCGAAGCCTGCCCAGAAGCGCGCCAGAt > 2:188594/1‑257 (MQ=255) at‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAgg < 6:741639/148‑1 (MQ=255) t‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATc < 4:778228/107‑1 (MQ=255) | CAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGCCCCCACAGAGGCCAGGCTGGCGGCATGGTTAACACCGAGAATATCCGGTGATGCCAGAGGGTTGCGCACAATCCCCTGTATCAGCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGGCCAGCGCGCGTGCGAGTACATCTGCCAGCAGCATCAGCGTGGCCCCCAGCAGCATGCTCACTGGCAGTACGTTGCGCTGATCGAAGCCTGCCCAGAAGCGCGCCAGATGTGGCACCAGCAGAC > NC_000913/4512076‑4512619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |